Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0262100 |
| Transcript ID | LotjaGi5g1v0262100.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-1,3-glucosyltransferase; TAIR: AT2G44660.1 ALG6, ALG8 glycosyltransferase family; Swiss-Prot: sp|O80505|ALG8_ARATH Probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase; TrEMBL-Plants: tr|I1KRW2|I1KRW2_SOYBN Alpha-1,3-glucosyltransferase; Found in the gene: LotjaGi5g1v0262100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57093255..57097237) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAAAAGAGAAAGTAAGCTCGGAAGACGTTCACAATTCTTATAGCCCCAAAACAAGTCTCTGGTGGTTTTATCTTGT TGCTACTTGTATAAAAGCTCTCCTTTTCCCATCCTACCGCAGTACAGACTTTGAGGTGCACCGCAATTGGCTGGCTTTGA CCCACTCCCTCCCTCTTTCCCAGTGGTACTTTGATGAGACCAGTCCATGGACTCTTGACTACCCACCTTTCTTTGCCTAT TTTGAACGCTTTCTATCCATTTTTGCTCACCTTGTTGATCCCCAAATAGTGCACCTTCAGCAGGGCCTGAATTATAGCTC AAACAAGGTGATTTATTTCCAAAGACTTACCGTAATAGTCTCTGATTTGACTCTTCTTTATGGGGTTTACAGACTTACTC GGAATCTAGATTCAAGAAAGCAAAAATTGATCTGGTCATTGGTTATTTGGTCACCAATGCTTCTTATAGTGGATCATGTA CATTTCCAATACAATGGCTTTCTCATTGGGATTTTGTTGATTTCTCTTTCATATTTGGAGGAAGGAGGGGATTTGTTAGG TGGGTTTGTTTTTGCTGTTCTCTTGTGCTTTAAGCATTTATTTGCAGTGGCAGCGCCAGTTTATTTTGTTTATTTGTTGA GACACTATTGTCGGGGTGGGATTGTGAGAGGCTCCAGTCGACTTTTGATTATGGGAGGTATGGTTGCAGCAGTGTTTGCA TCTGCATTTGGGCCATTTTTCTACTTTGGGCAGGTAATTATAGTTTATTTTTTTATTCAGTATTTTTGGCTGTCTTTCTC CCATTTATTACTTACTTTGCTACTCAAACCCTATAAGTTCAGTAGTTCTCAACTAATGTCTCATGTGAATGCATGAGATG TAATAGATGAAGAGGTTGAATGGGGTAAAACTCATTAGTAAAAGCTCTTCCACTGAATCAGAACAAGGGGCAATATATCC AGATTTACTTAACCACCTGAATTATGTTCCAAAAGAGATTACTGCATGGTAAAGAATTATATTAGCTTAAATTTGGTTCT CCAATTATAACCAACTTTGCTTTCTTACGTGCCAGAGAACAAAATTCATCATCCTTTGTTAAATTCTTGTATTACTTCAC TTTTGTCAGTGTAGAAGTGAAGACATTCATTTCATATGCACCCCTTGAATTATTGATTTGCTTATTAGTTTTTGAAATTA TAAATTGCAGATACAACAAGTCATCCAACGATTGTTTCCATTTGGCAGGGGGCTTTGCCATGCATATTGGGCCCCAAATT TTTGGGTATTCTATATCATGTCAGATAAAGGGCTTGCTTTCATATTCAGAAAACTTGGGTTTAATATCCAGACACCAGCA GGTTCATTCACAGCTGGGCTAGTAGGGGATTCCTCACCTTTTTCTGTACTACCTCAGGTAAGATTTATGCTCATGTTTTC TCTGAATAACTGGTTGTTATCAAACTGGGGAAAAAAGCACACAAGGGGATGGTTATCACCCATGTAAAACTTATCACATT CTTGCATCAGAACAAACAGATGATTTACATACCTTATTTGATGCATGCTTTTCATTAGTAGGAGAGCGAGGGGTGGTGTT ATATTGCTTCAAGCTTGTAATTGGGAATCTAGCCACTGAGATTGGAATGTTTTTTCTAAACATGCTGAAAATATTGCTAA TTTACTTAATTACCCTCATCCCATTTTCTAAGTAAAGAAATATAGATTATAATATTAATATTCACATGGGAGCCTTGACA TGGTAACTCAAAATCAGCCCTAGTCCAACATTTAGATGTCATGTGATATCAGTGAAACATTATAATTGGTAGTAGAAAGC ATAATATTAGTTTCATTTTACACATTCCAAGCTAGCCATTGCATCTTCCAAGATGCTTCTCTTCAATTGATATCAACAAC TGAGCCTAATCACTGGTTGACGTTGTTCTTGTTAGAAATATAATATAATATAAAATCGTTCATGTTTGCGTTACCCAACA ACTTTTGGGATAGTTGGTTCATGACATTGTATCAGAGCCTCTATGACCGAGTGGTCTTGAGTTCAATCCTTGTTTCCCAC CATTATTCTAATAAAAAGTTGAATTTAAGAAGCAGATGTTAGGTGTAACTTCTAAGTCTAGTGGGGTCTCGTGTGAGAGG GTGTTAGAAATATAATGTAAAATCATTCATGTTCCCATTACCCAACAACTTAAACTTTTGAGATAGTTGGTTCATGACCG TTCTCATTTCCAAAATAAATATAAAATATAGATCATAAATATAAATGCCCATGGGCAGGCTCAATTTGGTAATTTGAAAT CAGAACCAGTCTGATATCAAAAAAGTTATATTTGTGAAACATTGTGACTGGTGGGAGAATGCATAATATTAGCTTTTACA TTTTATACATTTTAGGCTAGCTATTGGCTATTGCAACTTCCAAGATGCTTCTGTTCAATTGAGATCAGCAACTGAGCTAG ATAACTGGTTATTTGAATCTACAACTATGATATAACAGTTATGTTTAGTCATACTACTTTGCACTTCATAATTCAGAATC AGAAGTTTCATCAAAACATTTATCTTTTCTATTTACTAATCTGCAGGTCACTCCGTCCATGACCTTTATAATGGTTCTAC TTACCTTATCTCCTTGTCTTTTCAAGGCTTGGAAGAATCCACAGCCAAAGATGATTTGTAGATGGGTAGCCTATGCTTAT ACCTGTGGCTTTCTTTTTGGGTGGCACGTGCATGAGAAGGCATCACTCCATTTTGTAATTCCACTAGCTATTGTTGCTGC GCAAACCCTGGAGGATGCAAAGCATTACTTTTTGCTATCAATAGGTATGCTTCTAACGCTCATTCATTTGTTGGCCAGCT TACAATGCTTGCTTTTCTTTTTCTTATTTTCTTCTGTTTTTTTTAATGATACTGAAAATTTAAAATTGAAGTATACATAA AATGAAACAAATTTTATAGAGAATGTGTGTATGTGTCTGTTAGTGGAAAACACAAGTGATGGATGTGCCCCTTTAAAGGC AATATTTTACTGAAAGTCATGAAAAAGCCGTGAACAAATTCTAGATCAACTTTATCTTTTCTAGCTAATCTTGCCTTTTG CAAATATCATCTACGAACCAGAGAGCTTTAGAAACAGCACAAATTTCTGACACAAATAGTAGTACCACAACTACATAAAA TTTTGATATTCTAATTCTCTTCATTAGCTGGTAATTCTCAGCCTGGTTTCTGTACAGTCATACTGCTGAGATTTATATTT TCATAAACTAACTACAGCTAAGATCAAAGTACACTTATGGAGCTAGAAACTATTTCCATCTTTCACAACTGTAAGAAACC AGAATAAAAGATAAGAGAAAACCAAGAAACAATTTTATTTTTTTTCCAGTGCCTCTTTTCACACTGTTGTATGTTTGCTG TCAAATATTTACAATGAGTGATTTGGAGGCCAAAGAAGCAGAAGTTGTGTGTCTGAGTCACACCATTTTGGTATCAGTGC TTCTCTTTTCCGTTTTTTGTTGCTTGGAATTCAGAGATTGCTTGTTTGTGCAGTATCCTGCTATTCACTTTTTCCGCTAC TATTCGAGGCACAAGAGTATCCTATCAAAGTTCTGTTGCTGCTTCTGCACTCCATTTTGATGTGGTCAGGCTTTTCAGCA CAATTTCATGATGGGATTGAGACAAGAGCGTCAAATGCTCGTCCAAAGAAAAAGGTTGATCAATTTGGATCTAAAGGTAG TTCAGGTGAACCTGTGAAGAATGAAGGTTTTGTTATTAGCTGGATTGAGAGGATTTATCCGGTTGGTCTTGTAGTTGTAG AGATATGGGGCCAATTTTTACACCCTCTTCTTTTGGGTGATAAGCTTGCATTCGCGCCCCTTATGTTGGTCTCTATATAC TGTGCTTTTGGGATCATGTACTCTTGGATTTGGCAGCTAAGATCCATTGTTAAATCTCTTTAA
CDS sequence (LotjaGi5g1v0262100.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAAAGAGAAAGTAAGCTCGGAAGACGTTCACAATTCTTATAGCCCCAAAACAAGTCTCTGGTGGTTTTATCTTGT TGCTACTTGTATAAAAGCTCTCCTTTTCCCATCCTACCGCAGTACAGACTTTGAGGTGCACCGCAATTGGCTGGCTTTGA CCCACTCCCTCCCTCTTTCCCAGTGGTACTTTGATGAGACCAGTCCATGGACTCTTGACTACCCACCTTTCTTTGCCTAT TTTGAACGCTTTCTATCCATTTTTGCTCACCTTGTTGATCCCCAAATAGTGCACCTTCAGCAGGGCCTGAATTATAGCTC AAACAAGGTGATTTATTTCCAAAGACTTACCGTAATAGTCTCTGATTTGACTCTTCTTTATGGGGTTTACAGACTTACTC GGAATCTAGATTCAAGAAAGCAAAAATTGATCTGGTCATTGGTTATTTGGTCACCAATGCTTCTTATAGTGGATCATGTA CATTTCCAATACAATGGCTTTCTCATTGGGATTTTGTTGATTTCTCTTTCATATTTGGAGGAAGGAGGGGATTTGTTAGG TGGGTTTGTTTTTGCTGTTCTCTTGTGCTTTAAGCATTTATTTGCAGTGGCAGCGCCAGTTTATTTTGTTTATTTGTTGA GACACTATTGTCGGGGTGGGATTGTGAGAGGCTCCAGTCGACTTTTGATTATGGGAGGTATGGTTGCAGCAGTGTTTGCA TCTGCATTTGGGCCATTTTTCTACTTTGGGCAGATACAACAAGTCATCCAACGATTGTTTCCATTTGGCAGGGGGCTTTG CCATGCATATTGGGCCCCAAATTTTTGGGTATTCTATATCATGTCAGATAAAGGGCTTGCTTTCATATTCAGAAAACTTG GGTTTAATATCCAGACACCAGCAGGTTCATTCACAGCTGGGCTAGTAGGGGATTCCTCACCTTTTTCTGTACTACCTCAG GTCACTCCGTCCATGACCTTTATAATGGTTCTACTTACCTTATCTCCTTGTCTTTTCAAGGCTTGGAAGAATCCACAGCC AAAGATGATTTGTAGATGGGTAGCCTATGCTTATACCTGTGGCTTTCTTTTTGGGTGGCACGTGCATGAGAAGGCATCAC TCCATTTTGTAATTCCACTAGCTATTGTTGCTGCGCAAACCCTGGAGGATGCAAAGCATTACTTTTTGCTATCAATAGTA TCCTGCTATTCACTTTTTCCGCTACTATTCGAGGCACAAGAGTATCCTATCAAAGTTCTGTTGCTGCTTCTGCACTCCAT TTTGATGTGGTCAGGCTTTTCAGCACAATTTCATGATGGGATTGAGACAAGAGCGTCAAATGCTCGTCCAAAGAAAAAGG TTGATCAATTTGGATCTAAAGGTAGTTCAGGTGAACCTGTGAAGAATGAAGGTTTTGTTATTAGCTGGATTGAGAGGATT TATCCGGTTGGTCTTGTAGTTGTAGAGATATGGGGCCAATTTTTACACCCTCTTCTTTTGGGTGATAAGCTTGCATTCGC GCCCCTTATGTTGGTCTCTATATACTGTGCTTTTGGGATCATGTACTCTTGGATTTGGCAGCTAAGATCCATTGTTAAAT CTCTTTAA
Protein sequence (LotjaGi5g1v0262100.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKEKVSSEDVHNSYSPKTSLWWFYLVATCIKALLFPSYRSTDFEVHRNWLALTHSLPLSQWYFDETSPWTLDYPPFFAY FERFLSIFAHLVDPQIVHLQQGLNYSSNKVIYFQRLTVIVSDLTLLYGVYRLTRNLDSRKQKLIWSLVIWSPMLLIVDHV HFQYNGFLIGILLISLSYLEEGGDLLGGFVFAVLLCFKHLFAVAAPVYFVYLLRHYCRGGIVRGSSRLLIMGGMVAAVFA SAFGPFFYFGQIQQVIQRLFPFGRGLCHAYWAPNFWVFYIMSDKGLAFIFRKLGFNIQTPAGSFTAGLVGDSSPFSVLPQ VTPSMTFIMVLLTLSPCLFKAWKNPQPKMICRWVAYAYTCGFLFGWHVHEKASLHFVIPLAIVAAQTLEDAKHYFLLSIV SCYSLFPLLFEAQEYPIKVLLLLLHSILMWSGFSAQFHDGIETRASNARPKKKVDQFGSKGSSGEPVKNEGFVISWIERI YPVGLVVVEIWGQFLHPLLLGDKLAFAPLMLVSIYCAFGIMYSWIWQLRSIVKSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 20 | 20 | - | – | |
| PANTHER | 20 | 533 | 514 | 8.6E-209 | ||
| PANTHER | 20 | 533 | 514 | 8.6E-209 | ||
| TMHMM | 21 | 39 | 19 | - | – | |
| Phobius | 21 | 39 | 19 | - | – | |
| Pfam | 28 | 526 | 499 | 1.6E-158 | ||
| Phobius | 40 | 111 | 72 | - | – | |
| TMHMM | 111 | 130 | 20 | - | – | |
| Phobius | 112 | 130 | 19 | - | – | |
| Phobius | 131 | 141 | 11 | - | – | |
| Phobius | 142 | 157 | 16 | - | – | |
| TMHMM | 143 | 157 | 15 | - | – | |
| Phobius | 158 | 162 | 5 | - | – | |
| TMHMM | 162 | 179 | 18 | - | – | |
| Phobius | 163 | 179 | 17 | - | – | |
| Phobius | 180 | 185 | 6 | - | – | |
| Phobius | 186 | 209 | 24 | - | – | |
| TMHMM | 186 | 208 | 23 | - | – | |
| Phobius | 210 | 228 | 19 | - | – | |
| TMHMM | 228 | 250 | 23 | - | – | |
| Phobius | 229 | 250 | 22 | - | – | |
| Phobius | 251 | 261 | 11 | - | – | |
| TMHMM | 262 | 281 | 20 | - | – | |
| Phobius | 262 | 281 | 20 | - | – | |
| Phobius | 282 | 320 | 39 | - | – | |
| TMHMM | 317 | 339 | 23 | - | – | |
| Phobius | 321 | 339 | 19 | - | – | |
| Phobius | 340 | 350 | 11 | - | – | |
| Phobius | 351 | 369 | 19 | - | – | |
| TMHMM | 352 | 369 | 18 | - | – | |
| Phobius | 370 | 393 | 24 | - | – | |
| TMHMM | 393 | 412 | 20 | - | – | |
| Phobius | 394 | 412 | 19 | - | – | |
| Phobius | 413 | 418 | 6 | - | – | |
| TMHMM | 419 | 438 | 20 | - | – | |
| Phobius | 419 | 437 | 19 | - | – | |
| Phobius | 438 | 503 | 66 | - | – | |
| TMHMM | 504 | 526 | 23 | - | – | |
| Phobius | 504 | 525 | 22 | - | – | |
| Phobius | 526 | 535 | 10 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Endoplasmic reticulum | The irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae. The ER takes two forms, rough (or granular), with ribosomes adhering to the outer surface, and smooth (with no ribosomes attached). | ||
| Cellular component | Endoplasmic reticulum membrane | The lipid bilayer surrounding the endoplasmic reticulum. | ||
| Biological process | Oligosaccharide-lipid intermediate biosynthetic process | The chemical reactions and pathways resulting in the formation of an oligosaccharide-lipid intermediate, such as a molecule of dolichol-P-man or dolicol-P-Glc used in N-linked glycosylation. | ||
| Molecular function | Transferase activity, transferring hexosyl groups | Catalysis of the transfer of a hexosyl group from one compound (donor) to another (acceptor). | ||
| Molecular function | Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase activity | Catalysis of the addition of the second glucose residue to the lipid-linked oligosaccharide precursor for N-linked glycosylation; the transfer of glucose from dolichyl phosphate glucose (Dol-P-Glc) on to the lipid-linked oligosaccharide Glc(1)Man(9)GlcNAc(2)-PP-Dol. |
Expression pattern of LotjaGi5g1v0262100.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…