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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0263700 |
| Transcript ID | LotjaGi5g1v0263700.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein family; TAIR: AT1G03010.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9SA69|Y1301_ARATH BTB/POZ domain-containing protein At1g03010; TrEMBL-Plants: tr|A0A151TWS2|A0A151TWS2_CAJCA BTB/POZ domain-containing protein family; Found in the gene: LotjaGi5g1v0263700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57325434..57330797) extracted from Lotus japonicus Gifu genome v1.2.
CCTGCATTTTCCTTGACTTTAGATTAAGTTTATTATAAACACAGAAACACTCATAAAGTATGTCCCTAATCACTTCCTCC ATCCTTTAACACTGCATGTATTCATGTGACTTTCACTTCTCCACAACTTTCCCTGAAGAAGTGGTCCTCAACACAAAGAA TCTGTCAAGAGAATCATACACATTACACTAACAGAGTGAAAACTCTTAGTGGGGTGCAGAGGTATCACAATTTTCAAGTT TGGTGGAGATGGGAGTTGTCACTGTGGGAGAATTCAAGTCCAGCATTTCAGGGAAGAGGACTTTTCGTCCAAGTTCAAGC ATAAGGCATGCCACTGAATGGTAATGTGGCCTATTTGTTGAGTATGATGTTTTCCACCATTTTTTTATTGTATTTAATTC ATGTTTAGATCAACTTATTTTTCCGCGAAAAAAATTCTGGCGCCTAGAAGCAACTCGCATAAGCTTCTTCCCAAAATTAA TTTTAACTCTCAGGAATTTCAAAACGTGCTAATTAGTGTTGTTCCAATTCCACTTCTTTTTCTTCAATATCAGCTGCTAG CTTAACTTCCAAAAACCAAAACCTGCAAGTAGCATTTAGATGCATCAGGGTGATATTTCATTTTCTGAAGCAAAGTGAAT GAATGTAATGAGGATTCAGTGAATGGACAGAATGGCAGATAGTTCAATAAATTGATATAATGACCCACTATAAACTTTGA AAACAAATCTCAAGTGTTTCCCTTGTAATGTCATTTTCACAAGTAGATTTTGACATTGAAATTGATCAATTATTTGAAAC CAAGTGCTCCAAGATTAATTCTAAGCTGTTTAATTTTGTGGGTCTGCTACTGTCTCTTTCCAATTGGATTCTGAAGGCAC CAGTTGGTAAACTTTTTCTTTCATTAGTGTTGTCATTTTGTCAGTTTATATCTCTCTTTTGTATTCCTTGAAATTTCAAC CTTCCACAACTTGTCATTATTCACAGACTATGCAAATAAATGGTAGATATAGCTGTAACCTGTGACCTTGACATTGATGT ATAGCATGTCTAGAGCAGCTTATTTTTCCTTAGAATCAATTCTGGCACACAGAAACTACTAATATACTCTTCTTCCCAAA AGTGATTCTGGCTTTAGAATCAGTTGTAGAAAAATTTCCAAACATCCTAGTTGTCCTTTACTCCCTAGACAGCAATATGG TGCTGCATGGTGAAGGGCCAAATCTCACATATCTTATATGAAAATGTCAATAAATGTTTGTCTATCAATTATTCTGGTGC TATTATTATCTTCAGCCCCTAATTAAGGCTATGCTGTGAGTTTTGAATTAGTACGGAGATGCTGTAATAAGAGCTCACCA AGCATATGGGAAAATGTTTTGGATGTATATAGCACATGACAGTCCGGTGCACAAAACTCCCGCACGCGCGAGATCTGGGG AGGGTGATTATTTGGTCTATTCTACGCAGCCTTACTTTATTTTTTACACAAGAGGCTGTTTGAACCTCAGCCATATGACA AAAACTTTTTACCGTTGTGCCATGGCTCCCTTTCTTGGATGTATATAGCACAGAACAGCCTTAAACATCAACCTCACAAT ACTTGTGTGGCTAAAATGGTTTCCCTTTCTTACTTGTCTATTGTCCGGATTAATGGGCTCTATTAATGTAGCATAACCAA TCCTGTAATATTCAATTGGAATTAAACTCGTGTAGCCTTGTTGTCTGAGGTACTTTTTAACTAGTCCCACTCAAATTCTG TTTTATCATTGAGTTGGGGCCATTCCCATCTAGTAGCACTTGATCTTGGAAGATTACACTGTCTTTTGGTTTGTGGTGTA CAAAACACACACATTGAACTCCACCTTCTACATTAAATTGCACATACACCCTGCAGCTATAAACTCTCTTAATATTTCAC TTTGGTAATAATATAGTAATATGTGTAGCTGCACTTCTTGCTTTAGACAGATATTTCCATGTCTACACCTTGCAATTATT CACCTAAATTTGCATATTACAGGCCTATATCTGATGTATCTAGTGACCTTACCATTGAAATAGGAGCTTCAAGCTTTGCA CTTCACAAGGTAAAGAAACAAGCTACCTTTCTCACAGGTTACTGCATATTTAGCATAGCATAGGTATTCATAAAAAATGC CATTTTTCGGTGAATTTCATAAATATTGATTTTTTATGCATGTTTTAACACCTTCTAAAAGAATTTCAAGCTTAATATTA GGACAGTAGACATTAGCAGCCAGGGTAAAAATCATAAGAAGGCTTTATTCATGCAATTCCACAACTCATTGCAATTTTTT CTTCTACAGTTTCCTCTAGTTTCTCGGAGTGGAAGAATTAGGAAACTTCTGTTAGAAGCAAAAGATTCTAGAGCTTTGCG TGTAAGTCTCCCAAATGTGCCAGGGGGTGCAGAGGCGTTTGAGCTTGCTGCAAAATTCTGTTATGGAATTAATGTTGAGT TCACCCTCTCCAATGTTGCTATGCTAAAATGTGCTTCCCATTTTCTCGAAATGACAGAGGAATTCGCGGAGAAAAATTTG GAGACGCGAGCGGAGGCGTATCTAAAGGAGACTGTGCTACCAAACATATCAAGCACAATATCTGTCCTTCACCGTTGCGA AACTCTTCTTCCCATTGCAGAAGAGATTAGCCTTGTTAGCAGGTTGATCAATGCAATTGCTAACAATGTGTGCAAAGAGC AGCTAACTTCTGGTTTACAAAAACTGGACCATAACCATTTTCCTTCTAAATCTATCTCAAACATGGAACCTGAGACACCC TTAGAATGGTGGGGAAAGTCACTCAATGTTCTTAATCTTGATTTCTTCCAAAGAGTTTTGTCTGCAATGAAGTCAAAGGG ACTAAAACAAGAACTTATCAGCAAAATTTTGATAAACTATGCTCATAATTCTCTTCAAGGGATGGTTGTTAGGGACCCTC ATGCTGTCAAAGGGAAACTTGACTTAGAATTACAGAAGAAACAAAGGGTCATTGTTGAAGCTATAGCTGGATTACTTCCA ACTCAATCAAGGAAAAGCCCGGTTCCAATCGCGTTTCTCTCAAGTTTGTTGAAAGCTGCAATAGCAGCTTCAGCTTCTGG CTCTTGCAGAGCTGATTTGGAAAGGAGGATTGGTTTGCAACTTGACCAGGCAATTCTTGAAGACATTCTGATTCCAACAA ACTCACATCAAAATAATACTCACAGCACCATTTATGACACAGATTCAATTTTGAGGATTTTTTCCATCTTCCTGAACTTG GATGATGAGGATGAAGATGATAACCACATGAGGGATGAAAATGAAATGATTTATGACTTTGAAAGTCCTGGTTCTCCAAA ACAAAGCTCAATTCTGAAGGTATCCAAATTGCTTGACAACTATCTTGCTGAAGTAGCACTGGACTCAAACTTGTTGCCAT CAAAGTTCACATCACTTGTGGAACTACTTCCAGATCATGCACGTATTGTAAGTGATGGACTCTATAGAGCTGTTGATATC TTCCTTAAGGTGAGCTTTGCTTCTCTCTTTCACTATCATTTGTCATGAAACAACTATCTAACTCGTCCCTTCATGCAAGA GCATATTGGGCTTGAAGCATGGAAAATGCATATACTGAAAATTAACTTTCTATGAGAATCATAGGGCAAACAAAGATTGA ACTCTTGACTACTTAGTACATGTTTGGATCACCATTTCCAGAATTGTTTTTGGGAAAGTATGGTAAAAGTATGTTGAATT TGAAGTGATATATGTTTAAATACACGATTCCCCTTTTCTATATGGTAATATGAAATCTAGTTAGTGCATGTTCGGATACA TGGTAGAAAAACACGATGAAGTCAAAATCATGGTGGAAAGAAATAAAAGTTATTTCTGTTCATCGTGATTTTCTACCGTG TATTAAAACAAGTGCTTATAAAATCTCATAATTGATTATGTCCACTGCAGAAGCGGCTTTCTATAGCTTTTCTACAAAAT TGATTTTGGAACTAAAGTCTATTGTCAAACATATATATAGAGTGAGTCTGGTCTATGAGAATTGATACCATTACTCCCAA ATGTGGAAACAAACACATATTTAATCATAGAAACTCATACTATTGATACTATGTCATGAATAAATAACTACCCAAAACTT AAACCCTACTTACCCATTTGTTTGTTTTCTACTTTTGTCACATACATACATACAGGTTCATCCAAACATGAAGGACTCAG AACGTTATCGTCTCTGCAAAACCATTGACTGCAACAAACTATCTCAAGAAGCCTGCAGCCACGCCGCACAAAACGAAAGA CTACCAGTGCAGATGGCAGTGCAAGTTCTCTACTTCGAGCAAATCAGGCTCCGGAACGCCATGAACGGCGGAGGCAACAA CCAATTCTTCTTCGGCGCCGGGTTCAACGCTCATCAATTCCCTCAACGTTCAGGGAGCGGTGCAGGAAGCGGAGCCATTT CTCCGAGAGACAACTACGCTTCAGTGAGAAGAGAAAACAGAGAGCTGAAGCTTGAGGTTGCGAGGATGAGAATGAGGCTC ACTGATTTGGAGAAAGACCATGTTTCCATGAAGCAGGAGCTTGTGAAGTCTCACCCTGCGAACAAGCTGTTCAAATCTTT TACAAAGAAAATGAGCAAGCTCAATGCTCTGTTTCGGATGAATGGTATCAAGATGAATGGTGCTGGTTCTGAGAGCAGGT TTCCTTTTGCAAAGAGAAGGCGTCACTCAGTTTCATGATTATAGTATGTGGAACAGAAAGAATGTATATAGAATGTATTA TGCATGGAGTGATTGTGTAATTTTTTCACTCCATAGTTTTCTTGTGTTTTAATTGCTTAATGGTGTCATTACTCAAACTT TGGCTGGACTATCATGAATCATGATCCAAACTAAGAGTAACTTTTAGAAAAACATGGAAAGAAAATTTACCCAAAGCCAT CCCTCCAAGACAACCTTAAGCATATTTGGTTTTGTTCTTCTAGAGTGATGGTGTACGGTGGTAATTGAGGCAGAGAGTGC GGCGAAATAGTGTGAATCCACAAATTGTTCTTCCATAAATCCAGACCGAAGAGTAGCGGTGCATGGTGACGATCGAGGTA GAGAGCGCGTGAAGTGAATCCACAACGTGAGATGTACCTACAAAATATACTTTAGCACTCAAATCAGCTTAAGATCGTAG ATAGTATCTCAAAGTCTTATAAGAGAAATATGTAGCAAATGAGCAATGCTTCAATTATCGAATGATCAAACCTGTATTTA TAGAGTTCGGTATGAACAGTAATGAAGGTGTTTAACCTTAACTTAGTCTTGTAAATAGCTACTGAGACTACAACTTTGCT TGAG
CDS sequence (LotjaGi5g1v0263700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGTTGTCACTGTGGGAGAATTCAAGTCCAGCATTTCAGGGAAGAGGACTTTTCGTCCAAGTTCAAGCATAAGGCA TGCCACTGAATGGCCTATATCTGATGTATCTAGTGACCTTACCATTGAAATAGGAGCTTCAAGCTTTGCACTTCACAAGT TTCCTCTAGTTTCTCGGAGTGGAAGAATTAGGAAACTTCTGTTAGAAGCAAAAGATTCTAGAGCTTTGCGTGTAAGTCTC CCAAATGTGCCAGGGGGTGCAGAGGCGTTTGAGCTTGCTGCAAAATTCTGTTATGGAATTAATGTTGAGTTCACCCTCTC CAATGTTGCTATGCTAAAATGTGCTTCCCATTTTCTCGAAATGACAGAGGAATTCGCGGAGAAAAATTTGGAGACGCGAG CGGAGGCGTATCTAAAGGAGACTGTGCTACCAAACATATCAAGCACAATATCTGTCCTTCACCGTTGCGAAACTCTTCTT CCCATTGCAGAAGAGATTAGCCTTGTTAGCAGGTTGATCAATGCAATTGCTAACAATGTGTGCAAAGAGCAGCTAACTTC TGGTTTACAAAAACTGGACCATAACCATTTTCCTTCTAAATCTATCTCAAACATGGAACCTGAGACACCCTTAGAATGGT GGGGAAAGTCACTCAATGTTCTTAATCTTGATTTCTTCCAAAGAGTTTTGTCTGCAATGAAGTCAAAGGGACTAAAACAA GAACTTATCAGCAAAATTTTGATAAACTATGCTCATAATTCTCTTCAAGGGATGGTTGTTAGGGACCCTCATGCTGTCAA AGGGAAACTTGACTTAGAATTACAGAAGAAACAAAGGGTCATTGTTGAAGCTATAGCTGGATTACTTCCAACTCAATCAA GGAAAAGCCCGGTTCCAATCGCGTTTCTCTCAAGTTTGTTGAAAGCTGCAATAGCAGCTTCAGCTTCTGGCTCTTGCAGA GCTGATTTGGAAAGGAGGATTGGTTTGCAACTTGACCAGGCAATTCTTGAAGACATTCTGATTCCAACAAACTCACATCA AAATAATACTCACAGCACCATTTATGACACAGATTCAATTTTGAGGATTTTTTCCATCTTCCTGAACTTGGATGATGAGG ATGAAGATGATAACCACATGAGGGATGAAAATGAAATGATTTATGACTTTGAAAGTCCTGGTTCTCCAAAACAAAGCTCA ATTCTGAAGGTATCCAAATTGCTTGACAACTATCTTGCTGAAGTAGCACTGGACTCAAACTTGTTGCCATCAAAGTTCAC ATCACTTGTGGAACTACTTCCAGATCATGCACGTATTGTAAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTTAAGG TTCATCCAAACATGAAGGACTCAGAACGTTATCGTCTCTGCAAAACCATTGACTGCAACAAACTATCTCAAGAAGCCTGC AGCCACGCCGCACAAAACGAAAGACTACCAGTGCAGATGGCAGTGCAAGTTCTCTACTTCGAGCAAATCAGGCTCCGGAA CGCCATGAACGGCGGAGGCAACAACCAATTCTTCTTCGGCGCCGGGTTCAACGCTCATCAATTCCCTCAACGTTCAGGGA GCGGTGCAGGAAGCGGAGCCATTTCTCCGAGAGACAACTACGCTTCAGTGAGAAGAGAAAACAGAGAGCTGAAGCTTGAG GTTGCGAGGATGAGAATGAGGCTCACTGATTTGGAGAAAGACCATGTTTCCATGAAGCAGGAGCTTGTGAAGTCTCACCC TGCGAACAAGCTGTTCAAATCTTTTACAAAGAAAATGAGCAAGCTCAATGCTCTGTTTCGGATGAATGGTATCAAGATGA ATGGTGCTGGTTCTGAGAGCAGGTTTCCTTTTGCAAAGAGAAGGCGTCACTCAGTTTCATGA
Protein sequence (LotjaGi5g1v0263700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVVTVGEFKSSISGKRTFRPSSSIRHATEWPISDVSSDLTIEIGASSFALHKFPLVSRSGRIRKLLLEAKDSRALRVSL PNVPGGAEAFELAAKFCYGINVEFTLSNVAMLKCASHFLEMTEEFAEKNLETRAEAYLKETVLPNISSTISVLHRCETLL PIAEEISLVSRLINAIANNVCKEQLTSGLQKLDHNHFPSKSISNMEPETPLEWWGKSLNVLNLDFFQRVLSAMKSKGLKQ ELISKILINYAHNSLQGMVVRDPHAVKGKLDLELQKKQRVIVEAIAGLLPTQSRKSPVPIAFLSSLLKAAIAASASGSCR ADLERRIGLQLDQAILEDILIPTNSHQNNTHSTIYDTDSILRIFSIFLNLDDEDEDDNHMRDENEMIYDFESPGSPKQSS ILKVSKLLDNYLAEVALDSNLLPSKFTSLVELLPDHARIVSDGLYRAVDIFLKVHPNMKDSERYRLCKTIDCNKLSQEAC SHAAQNERLPVQMAVQVLYFEQIRLRNAMNGGGNNQFFFGAGFNAHQFPQRSGSGAGSGAISPRDNYASVRRENRELKLE VARMRMRLTDLEKDHVSMKQELVKSHPANKLFKSFTKKMSKLNALFRMNGIKMNGAGSESRFPFAKRRRHSVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 629 | 627 | 0.0 | – | |
| PANTHER | 3 | 629 | 627 | 0.0 | ||
| SUPERFAMILY | 22 | 123 | 102 | 2.43E-13 | ||
| CDD | 33 | 130 | 98 | 8.396E-32 | – | |
| Gene3D | 33 | 184 | 152 | 6.7E-9 | – | |
| Pfam | 37 | 139 | 103 | 4.8E-5 | ||
| ProSiteProfiles | 38 | 106 | 69 | 9.062 | ||
| ProSiteProfiles | 212 | 504 | 293 | 85.277 | ||
| Pfam | 212 | 480 | 269 | 1.2E-85 | ||
| Coils | 547 | 581 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0263700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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