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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0263700 |
| Transcript ID | LotjaGi5g1v0263700.4 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein family; TAIR: AT1G03010.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|Q9SA69|Y1301_ARATH BTB/POZ domain-containing protein At1g03010; TrEMBL-Plants: tr|A0A151TWS2|A0A151TWS2_CAJCA BTB/POZ domain-containing protein family; Found in the gene: LotjaGi5g1v0263700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:57326040..57330549) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGAGTTGTCACTGTGGGAGAATTCAAGTCCAGCATTTCAGGGAAGAGGACTTTTCGTCCAAGTTCAAGCATAAGGCA TGCCACTGAATGGTAATGTGGCCTATTTGTTGAGTATGATGTTTTCCACCATTTTTTTATTGTATTTAATTCATGTTTAG ATCAACTTATTTTTCCGCGAAAAAAATTCTGGCGCCTAGAAGCAACTCGCATAAGCTTCTTCCCAAAATTAATTTTAACT CTCAGGAATTTCAAAACGTGCTAATTAGTGTTGTTCCAATTCCACTTCTTTTTCTTCAATATCAGCTGCTAGCTTAACTT CCAAAAACCAAAACCTGCAAGTAGCATTTAGATGCATCAGGGTGATATTTCATTTTCTGAAGCAAAGTGAATGAATGTAA TGAGGATTCAGTGAATGGACAGAATGGCAGATAGTTCAATAAATTGATATAATGACCCACTATAAACTTTGAAAACAAAT CTCAAGTGTTTCCCTTGTAATGTCATTTTCACAAGTAGATTTTGACATTGAAATTGATCAATTATTTGAAACCAAGTGCT CCAAGATTAATTCTAAGCTGTTTAATTTTGTGGGTCTGCTACTGTCTCTTTCCAATTGGATTCTGAAGGCACCAGTTGGT AAACTTTTTCTTTCATTAGTGTTGTCATTTTGTCAGTTTATATCTCTCTTTTGTATTCCTTGAAATTTCAACCTTCCACA ACTTGTCATTATTCACAGACTATGCAAATAAATGGTAGATATAGCTGTAACCTGTGACCTTGACATTGATGTATAGCATG TCTAGAGCAGCTTATTTTTCCTTAGAATCAATTCTGGCACACAGAAACTACTAATATACTCTTCTTCCCAAAAGTGATTC TGGCTTTAGAATCAGTTGTAGAAAAATTTCCAAACATCCTAGTTGTCCTTTACTCCCTAGACAGCAATATGGTGCTGCAT GGTGAAGGGCCAAATCTCACATATCTTATATGAAAATGTCAATAAATGTTTGTCTATCAATTATTCTGGTGCTATTATTA TCTTCAGCCCCTAATTAAGGCTATGCTGTGAGTTTTGAATTAGTACGGAGATGCTGTAATAAGAGCTCACCAAGCATATG GGAAAATGTTTTGGATGTATATAGCACATGACAGTCCGGTGCACAAAACTCCCGCACGCGCGAGATCTGGGGAGGGTGAT TATTTGGTCTATTCTACGCAGCCTTACTTTATTTTTTACACAAGAGGCTGTTTGAACCTCAGCCATATGACAAAAACTTT TTACCGTTGTGCCATGGCTCCCTTTCTTGGATGTATATAGCACAGAACAGCCTTAAACATCAACCTCACAATACTTGTGT GGCTAAAATGGTTTCCCTTTCTTACTTGTCTATTGTCCGGATTAATGGGCTCTATTAATGTAGCATAACCAATCCTGTAA TATTCAATTGGAATTAAACTCGTGTAGCCTTGTTGTCTGAGGTACTTTTTAACTAGTCCCACTCAAATTCTGTTTTATCA TTGAGTTGGGGCCATTCCCATCTAGTAGCACTTGATCTTGGAAGATTACACTGTCTTTTGGTTTGTGGTGTACAAAACAC ACACATTGAACTCCACCTTCTACATTAAATTGCACATACACCCTGCAGCTATAAACTCTCTTAATATTTCACTTTGGTAA TAATATAGTAATATGTGTAGCTGCACTTCTTGCTTTAGACAGATATTTCCATGTCTACACCTTGCAATTATTCACCTAAA TTTGCATATTACAGGCCTATATCTGATGTATCTAGTGACCTTACCATTGAAATAGGAGCTTCAAGCTTTGCACTTCACAA GGTAAAGAAACAAGCTACCTTTCTCACAGGTTACTGCATATTTAGCATAGCATAGGTATTCATAAAAAATGCCATTTTTC GGTGAATTTCATAAATATTGATTTTTTATGCATGTTTTAACACCTTCTAAAAGAATTTCAAGCTTAATATTAGGACAGTA GACATTAGCAGCCAGGGTAAAAATCATAAGAAGGCTTTATTCATGCAATTCCACAACTCATTGCAATTTTTTCTTCTACA GTTTCCTCTAGTTTCTCGGAGTGGAAGAATTAGGAAACTTCTGTTAGAAGCAAAAGATTCTAGAGCTTTGCGTGTAAGTC TCCCAAATGTGCCAGGGGGTGCAGAGGCGTTTGAGCTTGCTGCAAAATTCTGTTATGGAATTAATGTTGAGTTCACCCTC TCCAATGTTGCTATGCTAAAATGTGCTTCCCATTTTCTCGAAATGACAGAGGAATTCGCGGAGAAAAATTTGGAGACGCG AGCGGAGGCGTATCTAAAGGAGACTGTGCTACCAAACATATCAAGCACAATATCTGTCCTTCACCGTTGCGAAACTCTTC TTCCCATTGCAGAAGAGATTAGCCTTGTTAGCAGGTTGATCAATGCAATTGCTAACAATGTGTGCAAAGAGCAGCTAACT TCTGGTTTACAAAAACTGGACCATAACCATTTTCCTTCTAAATCTATCTCAAACATGGAACCTGAGACACCCTTAGAATG GTGGGGAAAGTCACTCAATGTTCTTAATCTTGATTTCTTCCAAAGAGTTTTGTCTGCAATGAAGTCAAAGGGACTAAAAC AAGAACTTATCAGCAAAATTTTGATAAACTATGCTCATAATTCTCTTCAAGGGATGGTTGTTAGGGACCCTCATGCTGTC AAAGGGAAACTTGACTTAGAATTACAGAAGAAACAAAGGGTCATTGTTGAAGCTATAGCTGGATTACTTCCAACTCAATC AAGGAAAAGCCCGGTTCCAATCGCGTTTCTCTCAAGTTTGTTGAAAGCTGCAATAGCAGCTTCAGCTTCTGGCTCTTGCA GAGCTGATTTGGAAAGGAGGATTGGTTTGCAACTTGACCAGGCAATTCTTGAAGACATTCTGATTCCAACAAACTCACAT CAAAATAATACTCACAGCACCATTTATGACACAGATTCAATTTTGAGGATTTTTTCCATCTTCCTGAACTTGGATGATGA GGATGAAGATGATAACCACATGAGGGATGAAAATGAAATGATTTATGACTTTGAAAGTCCTGGTTCTCCAAAACAAAGCT CAATTCTGAAGGTATCCAAATTGCTTGACAACTATCTTGCTGAAGTAGCACTGGACTCAAACTTGTTGCCATCAAAGTTC ACATCACTTGTGGAACTACTTCCAGATCATGCACGTATTGTAAGTGATGGACTCTATAGAGCTGTTGATATCTTCCTTAA GGTGAGCTTTGCTTCTCTCTTTCACTATCATTTGTCATGAAACAACTATCTAACTCGTCCCTTCATGCAAGAGCATATTG GGCTTGAAGCATGGAAAATGCATATACTGAAAATTAACTTTCTATGAGAATCATAGGGCAAACAAAGATTGAACTCTTGA CTACTTAGTACATGTTTGGATCACCATTTCCAGAATTGTTTTTGGGAAAGTATGGTAAAAGTATGTTGAATTTGAAGTGA TATATGTTTAAATACACGATTCCCCTTTTCTATATGGTAATATGAAATCTAGTTAGTGCATGTTCGGATACATGGTAGAA AAACACGATGAAGTCAAAATCATGGTGGAAAGAAATAAAAGTTATTTCTGTTCATCGTGATTTTCTACCGTGTATTAAAA CAAGTGCTTATAAAATCTCATAATTGATTATGTCCACTGCAGAAGCGGCTTTCTATAGCTTTTCTACAAAATTGATTTTG GAACTAAAGTCTATTGTCAAACATATATATAGAGTGAGTCTGGTCTATGAGAATTGATACCATTACTCCCAAATGTGGAA ACAAACACATATTTAATCATAGAAACTCATACTATTGATACTATGTCATGAATAAATAACTACCCAAAACTTAAACCCTA CTTACCCATTTGTTTGTTTTCTACTTTTGTCACATACATACATACAGGTTCATCCAAACATGAAGGACTCAGAACGTTAT CGTCTCTGCAAAACCATTGACTGCAACAAACTATCTCAAGAAGCCTGCAGCCACGCCGCACAAAACGAAAGACTACCAGT GCAGATGGCAGTGCAAGTTCTCTACTTCGAGCAAATCAGGCTCCGGAACGCCATGAACGGCGGAGGCAACAACCAATTCT TCTTCGGCGCCGGGTTCAACGCTCATCAATTCCCTCAACGTTCAGGGAGCGGTGCAGGAAGCGGAGCCATTTCTCCGAGA GACAACTACGCTTCAGTGAGAAGAGAAAACAGAGAGCTGAAGCTTGAGGTTGCGAGGATGAGAATGAGGCTCACTGATTT GGAGAAAGACCATGTTTCCATGAAGCAGGAGCTTGTGAAGTCTCACCCTGCGAACAAGCTGTTCAAATCTTTTACAAAGA AAATGAGCAAGCTCAATGCTCTGTTTCGGATGAATGGTATCAAGATGAATGGTGCTGGTTCTGAGAGCAGGTTTCCTTTT GCAAAGAGAAGGCGTCACTCAGTTTCATGA
CDS sequence (LotjaGi5g1v0263700.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAGTTGTCACTGTGGGAGAATTCAAGTCCAGCATTTCAGGGAAGAGGACTTTTCGTCCAAGTTCAAGCATAAGGCA TGCCACTGAATGGCCTATATCTGATGTATCTAGTGACCTTACCATTGAAATAGGAGCTTCAAGCTTTGCACTTCACAAGT TTCCTCTAGTTTCTCGGAGTGGAAGAATTAGGAAACTTCTGTTAGAAGCAAAAGATTCTAGAGCTTTGCGTGTAAGTCTC CCAAATGTGCCAGGGGGTGCAGAGGCGTTTGAGCTTGCTGCAAAATTCTGTTATGGAATTAATGTTGAGTTCACCCTCTC CAATGTTGCTATGCTAAAATGTGCTTCCCATTTTCTCGAAATGACAGAGGAATTCGCGGAGAAAAATTTGGAGACGCGAG CGGAGGCGTATCTAAAGGAGACTGTGCTACCAAACATATCAAGCACAATATCTGTCCTTCACCGTTGCGAAACTCTTCTT CCCATTGCAGAAGAGATTAGCCTTGTTAGCAGGTTGATCAATGCAATTGCTAACAATGTGTGCAAAGAGCAGCTAACTTC TGGTTTACAAAAACTGGACCATAACCATTTTCCTTCTAAATCTATCTCAAACATGGAACCTGAGACACCCTTAGAATGGT GGGGAAAGTCACTCAATGTTCTTAATCTTGATTTCTTCCAAAGAGTTTTGTCTGCAATGAAGTCAAAGGGACTAAAACAA GAACTTATCAGCAAAATTTTGATAAACTATGCTCATAATTCTCTTCAAGGGATGGTTGTTAGGGACCCTCATGCTGTCAA AGGGAAACTTGACTTAGAATTACAGAAGAAACAAAGGGTCATTGTTGAAGCTATAGCTGGATTACTTCCAACTCAATCAA GGAAAAGCCCGGTTCCAATCGCGTTTCTCTCAAGTTTGTTGAAAGCTGCAATAGCAGCTTCAGCTTCTGGCTCTTGCAGA GCTGATTTGGAAAGGAGGATTGGTTTGCAACTTGACCAGGCAATTCTTGAAGACATTCTGATTCCAACAAACTCACATCA AAATAATACTCACAGCACCATTTATGACACAGATTCAATTTTGAGGATTTTTTCCATCTTCCTGAACTTGGATGATGAGG ATGAAGATGATAACCACATGAGGGATGAAAATGAAATGATTTATGACTTTGAAAGTCCTGGTTCTCCAAAACAAAGCTCA ATTCTGAAGGTATCCAAATTGCTTGACAACTATCTTGCTGAAGTAGCACTGGACTCAAACTTGTTGCCATCAAAGTTCAC ATCACTTGTGGAACTACTTCCAGATCATGCACGTATTGTAAGTGATGGACTCTATAGAGCTGTTCATCCAAACATGAAGG ACTCAGAACGTTATCGTCTCTGCAAAACCATTGACTGCAACAAACTATCTCAAGAAGCCTGCAGCCACGCCGCACAAAAC GAAAGACTACCAGTGCAGATGGCAGTGCAAGTTCTCTACTTCGAGCAAATCAGGCTCCGGAACGCCATGAACGGCGGAGG CAACAACCAATTCTTCTTCGGCGCCGGGTTCAACGCTCATCAATTCCCTCAACGTTCAGGGAGCGGTGCAGGAAGCGGAG CCATTTCTCCGAGAGACAACTACGCTTCAGTGAGAAGAGAAAACAGAGAGCTGAAGCTTGAGGTTGCGAGGATGAGAATG AGGCTCACTGATTTGGAGAAAGACCATGTTTCCATGAAGCAGGAGCTTGTGAAGTCTCACCCTGCGAACAAGCTGTTCAA ATCTTTTACAAAGAAAATGAGCAAGCTCAATGCTCTGTTTCGGATGAATGGTATCAAGATGAATGGTGCTGGTTCTGAGA GCAGGTTTCCTTTTGCAAAGAGAAGGCGTCACTCAGTTTCATGA
Protein sequence (LotjaGi5g1v0263700.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGVVTVGEFKSSISGKRTFRPSSSIRHATEWPISDVSSDLTIEIGASSFALHKFPLVSRSGRIRKLLLEAKDSRALRVSL PNVPGGAEAFELAAKFCYGINVEFTLSNVAMLKCASHFLEMTEEFAEKNLETRAEAYLKETVLPNISSTISVLHRCETLL PIAEEISLVSRLINAIANNVCKEQLTSGLQKLDHNHFPSKSISNMEPETPLEWWGKSLNVLNLDFFQRVLSAMKSKGLKQ ELISKILINYAHNSLQGMVVRDPHAVKGKLDLELQKKQRVIVEAIAGLLPTQSRKSPVPIAFLSSLLKAAIAASASGSCR ADLERRIGLQLDQAILEDILIPTNSHQNNTHSTIYDTDSILRIFSIFLNLDDEDEDDNHMRDENEMIYDFESPGSPKQSS ILKVSKLLDNYLAEVALDSNLLPSKFTSLVELLPDHARIVSDGLYRAVHPNMKDSERYRLCKTIDCNKLSQEACSHAAQN ERLPVQMAVQVLYFEQIRLRNAMNGGGNNQFFFGAGFNAHQFPQRSGSGAGSGAISPRDNYASVRRENRELKLEVARMRM RLTDLEKDHVSMKQELVKSHPANKLFKSFTKKMSKLNALFRMNGIKMNGAGSESRFPFAKRRRHSVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 3 | 623 | 621 | 0.0 | – | |
| PANTHER | 3 | 623 | 621 | 0.0 | ||
| SUPERFAMILY | 22 | 123 | 102 | 2.43E-13 | ||
| CDD | 33 | 130 | 98 | 7.96057E-32 | – | |
| Gene3D | 33 | 184 | 152 | 6.6E-9 | – | |
| Pfam | 37 | 139 | 103 | 4.8E-5 | ||
| ProSiteProfiles | 38 | 106 | 69 | 9.062 | ||
| ProSiteProfiles | 212 | 498 | 287 | 75.904 | ||
| Pfam | 212 | 474 | 263 | 2.7E-77 | ||
| Coils | 541 | 575 | 35 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi5g1v0263700.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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