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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0270000 |
| Transcript ID | LotjaGi5g1v0270000.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | DUF4050 family protein; TAIR: AT3G54880.1 zinc finger protein; Swiss-Prot: sp|A0R3I7|MPRB_MYCS2 Signal transduction histidine-protein kinase/phosphatase MprB; TrEMBL-Plants: tr|I3SNZ7|I3SNZ7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0270000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:58323041..58327782) extracted from Lotus japonicus Gifu genome v1.2.
CGCGAGTCGCCACAAAGAGAAGAAGAGAAATTGACACATTCTGCTAATTCTCTTACACTTGAACTTCGCCTCTGTTTCTC CGCCGGTGAACCTCTCCGCTCCGCCGCCATCGCCGCCGTGAAGGTAACTCCTAACGCCCTTTCTGATGAAGAAGACGGTG TAGAAAACTGGAAATTCTCGTTTATTTCTGTTTCACGTTTCGTTTCAGATCTCAATTGCACTTGTTTTACTGAATGCATT GTGATTCTTGTTGCAATTTCTTTGTTATTGTTTGCGTTTTGTATTTTATGTTCTTTGTGTGCATGCTTGTTATTACTTTA TTGCTTTCTGGATGATGAAACTGTGTTATTTATGATTTTCAACATTTGAAACCGCCACAATTTTTGAAGTGTATACTGTG TGAAAATTTATGTGTTCTTCACATATAGTGTGTTTTATCTCAGATCTGGAAGGGAATTGAGTTTAATTAATGAATTGAAT TGAATTTTTATGTGATGAGTTATGAGTATTAGATTGGAATTGTAGTTCTAGGGTAAGTAGGAATAGGATTCCTCTGTTTA GTAGATATAGGTGGAGTTGAGTCTTTGATAATGAGGAATATGTGCCATGACTTGTTTTATTAGAATTGAAGTTGAACTCT ATCCGGATAAGCGTGCATTTAGGATTTCTGCATCTTTGATAATAAATAAGGAATATATGCCATCTTTTAATGTTGGCTTG TGCATAACTGCTATTTAAATGGCTGCTAAGGACTGTAAGAAGTGTACTTTCTGGATTATAGAAGAATAGAAGACCAATTA CTATGTCTTTGTCAGTCGTCACCGAGTGATCCGATTCTTCAGTTTTTCTGTTAGTACTCTAAGTAAGATGAGGTCATAAT CTTTAGACATATAATGTGGAAGCTATGAATGCAAAGGGAATATGAGCTTCGGAGGAAGATATAATTTATTGGTGCTGGGG TAGATAATTTTTAACTTAGTATTTCATATATTGTTTTAGAAAGAATATATATAGTGTTAGTCTGGATAATTGTTGAAATT TACTTTTCATCCTTTTTTCCCATTTGTGATTTACCTTGTTGAATTTTCCTTTTATCAGTTTTACTAGTGTTGAACAACAT TAGGATATGTCAATATTCTTTGTTTTGAAGTTGTTCCTTCATCGTGCAGCGGCAGCAATAATGAGCATTGTTCTTTTCAA ATGCTGTGACATCAAGCAGCAATAACTGTAAGGAAGTTTGGAGGTACTTCTAGTCTTTGGAAGGGAACAATTGTTAGAAT TTATTGTGTAATTATTGTGGGGAATAGTCATTCAATTTGGATGTAATGGAAGTTTGTGCTGCAAGTTCCCATTCCAATGG GAAACATACTTTGAAGCATTCTAAATCTGCAGATGAAGTTAAAAGATCCAATGAAAAGGCCTATAGAAGTTCTCATTCCA ATGGGAAGCAAAATTTGAAGCAGACTTCCAATTTTGTCAATCATGGTGAGTTTGTCATTTTAGTTTTTATAATCCAGTAA TTAACTTGTCCTTTTCCTTTTTAGATGTATTTATTCTTTTATTTCGCTTAAGATTACCTCTCAAAAAGATGAATTATTCT TAAATCCCTTACAGCTTGTTGATAGCTATATGATTCGGGCTAATTACAACTTTACAAGCATTGTTTATAATGATTTTATT TATCCACCAAAATAACATTAACGTGAGAAATTTTGGACATAAATTCGTTCAGCGAACTGAAACATAGAAGGTGTCTAAAT AGATTTATATTTGTGAATGTTAACCCAGATTAGGCAATTTTGTAACTTGCATCTGAAAAAAAATGTGGTCACTTATTTCA TACTGATCAATGACTTCAGAAAATGCAGTTTGGAGCACAATCAGTTTGAAATAATGTACATGTTGGGTCATTCTTGTATT CAAAAGTAGCTTAATTAAAAATTTCCAGCAAAAGTAGCCTATTGGACATATATATTTGAGGACTCCTGCTACGGAGTCAG AGAGATTAAGCTCAAAAGCCTTATCCACTTAGAATGAATTAAAGAAACAAAGGATGAAAAAGCATTACCTTTATCATAAA TTTTTATGTTTTATTTCCCTATTTTAATTTTCCTGACCTTTATTGTAAATTTTCTGTTTTCTGTTAATTTTTCCATTATT GATGCTTTTGTTTAAAATCTAATATGGGTGAATATATTATGCAGCTGCAATTGCTTGGCATGAGAATAGAAAAAGATGGG TTGGTGATAAGTCTCGACATCCACCAAGAGAGGCTAAGGATCCAATTATTAGGTATACCTTAATCCTGTCTCCTTTTTGT CATTTACAATAGGAATCTCTGTTTCATAGTCATATTGAAAGGTCTAGAAGGGGTTTTATCCTACATATTTTTAGTTTCTT GTAGATATTTAGAGCCGCAGAAAAAAAAGTTTCTACACTCATGTCGCAGAGACGCAGCAAATCATTGTTCTCTAGCCTGT AATCTTAGATGTCTGTTTTATGTTCAATTTGATTCCTTACTTGATAAAACATCCTGGCCAATGAAATAAATATTACTTAT GCGCATTAAATATTACTTAAATACTGCATACTTCAACTTATTGAGACATGTCTCTTTTTAGGTTAAATTACAGTTTACGG CCTCTAGTTTACTCTTTCTCAAATTACCTCATCATCTTTTAGCTGTGTCAATTAACTCCCTTAACTTTGGACTGAACTGA AATCATTAACTTTTCTACCAATGATAATAACAGTTGAACCACATGCATAGCTCATGAATTCCAATATAAGACAGTCCACC ATATAGACCGCTCTCCATGGTGGCAACCTCTATAAGACTGCAAACCACAATGGAACTAAGAAAAGAGATGCATGTCCAAA CCTGGGGCCAACACTAAACCTAATATCACAGCATCACCAGAGCTACTGTGGTTGGACACTGACCAATGAACATCCAACCA TTTAAATCTCCATGCTATTCTCCCCTGCAAATCATGTCTAAGTGAAACCAAAATGGCATAAACAAAATGTATTTGCAGCC AAAATAAGGATTTCATATAAACACTTCAAACTGTCTCTGCTACACAAGTTTAATATATTCACTTCTCATGTAATAATTAT TTAATTACACAAATGGTTGTTAAATTCAAAATGGATTGAATTTTATTGATACATTATCCATTGTTAGAGTAATAACTAGT TATTGCTTATTCTAGAAGAGAAAAGTAATCTTTAACATGTATTGAAGGATAAACAACCAACACCAAAAACATTTTCCTGT TAAGTGGTGTGGTATTGAAGAGAAACAAGCACTCATACGCACACACACACATCTGTAGACAGAAAAGATAATAAGAGAAA GAAACAATGAATTTCAAGGTAAAAAGAATAAGAAAAAGGAATTGTAGGCTTTATAGAAAATCAGATTCCATGTGGACTCT CAGGTGCAATTTTATTTTTCTTGAACCATTTTGAGCAATCTGGTCCACTTGCATCTTTACTTCCGATGCAGCTTGGAAAA AGGAAGCCAAGTTCTTGGTACAACCAAGGTGAAAACTGGCTATTAATTTCATGCATGCATGTGTCTGATTGCCACTTTAA CTTTAGATGGCATAGTATACATGCTACGTGTATCCAAACTGCTTTGAGAACTTACTATGCCTCTCTTCTCACTTTATCTA ATATAGATAAATTATTGACTTCTGTTTGATTTCCCTTCAGGAACATACTAGTTTCCGTGATAAGGTCTAAACTTGTGTTT TAGTACAAATTGTTTTAAAATTCCAGTTATCAATGCTTTCAGTAGTTTTATGCATTTGTTTGACATAACATCTTACAACA ACAATTCTAAATTTTCTTTTACAGCTGGTCAACATCATATGAAGAGCTGCTTTCAACTAACGAGCCTTTTGCAGAGCCAA TACCCTTACCTGTAAGACTCTATACCAGTACCTGTGAGAATCTATCTAATTCATGAAATGTACGTTTTCACATGGATGTA TTACTTAAAAGAATGCACATAGCAATATTGAAAAAGTATTGTAGGAGCTTGTGCTTTTTAGAATGTGATTGATTGACAGA ATCTGGAAATTAAATCTTAAGAATAAAAAATCACTTGTAGAATTATGTCGATGCTCTTTAGAGTAGAAGTTTCTTCAGTC CCTTCTCTGTTTTAAGATTGAAGATGGTTTAGTAGCTTTACCTGCTATTAGATTCGCGTAAATCTTAAATGTTGTTGTCT TTTAAAGCATTCCAGTATTATATGGTTATTCAATTCAAAGCTTTCTGTATATCTCCTTCATGTACTGATGCAAATTTGGT GAACCGATTTCTCATGCAGGAGATGGTAGATTTCTTAGTAGATATTTGGTATGATGAAGAAGGCATCTTTGACTAAATTG TTGAAACTCCTAGTTAATGGCAACTGAAACAAGGAGCTGTGTAAAGCCTTTAACCTGCATTGACCTCCATTTCTCTTGTA GGTGTCCACTTACAGATCAATATCACAGTAGAGGGAGACTTTGATCTCCACATTAACCTCCTAGCATGAAATTTTTCTTG ATGTACTGATATTCTGATAAACTTCACGATTAGTGGGTTATTATTTTCCACCATTTATTTAGTGGTGGCAAATTTGATTA TTTGAAAAGATAAAAATATATGTATCTAATCTATTTGTATCTGCTGATCCATCAGCAAACATTCAAGATCTCATTCATGG GTGAAATAGTGGATTCTTCTTG
CDS sequence (LotjaGi5g1v0270000.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGTTTGTGCTGCAAGTTCCCATTCCAATGGGAAACATACTTTGAAGCATTCTAAATCTGCAGATGAAGTTAAAAG ATCCAATGAAAAGGCCTATAGAAGTTCTCATTCCAATGGGAAGCAAAATTTGAAGCAGACTTCCAATTTTGTCAATCATG CTGCAATTGCTTGGCATGAGAATAGAAAAAGATGGGTTGGTGATAAGTCTCGACATCCACCAAGAGAGGCTAAGGATCCA ATTATTAGCTGGTCAACATCATATGAAGAGCTGCTTTCAACTAACGAGCCTTTTGCAGAGCCAATACCCTTACCTGAGAT GGTAGATTTCTTAGTAGATATTTGGTATGATGAAGAAGGCATCTTTGACTAA
Protein sequence (LotjaGi5g1v0270000.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEVCAASSHSNGKHTLKHSKSADEVKRSNEKAYRSSHSNGKQNLKQTSNFVNHAAIAWHENRKRWVGDKSRHPPREAKDP IISWSTSYEELLSTNEPFAEPIPLPEMVDFLVDIWYDEEGIFD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 123 | 123 | 2.5E-58 | – | |
| MobiDBLite | 1 | 47 | 47 | - | – | |
| PANTHER | 1 | 123 | 123 | 2.5E-58 | – | |
| MobiDBLite | 16 | 34 | 19 | - | – | |
| Pfam | 83 | 119 | 37 | 5.3E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0270000.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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