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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0281800 |
| Transcript ID | LotjaGi5g1v0281800.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sucrose transporter; TAIR: AT1G22710.1 sucrose-proton symporter 2; Swiss-Prot: sp|Q39231|SUC2_ARATH Sucrose transport protein SUC2; TrEMBL-Plants: tr|Q9XHL6|Q9XHL6_PEA Sucrose transport protein SUT1; Found in the gene: LotjaGi5g1v0281800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59791163..59795184) extracted from Lotus japonicus Gifu genome v1.2.
AATTACACTACCCATTCAACACTAAACTACCCTCTCAACACCACCATTGTAGGTGGTCTTATGAGCTCTTTCTCAATAAA AGTGTTCCTCCATGTGAACACAAGTCAGAACTCACTGCCACACTGAAATAAGGACACTCACAATCATTACCACATTGCGT GCAAGTCCACGCCTCTACAACACCACCATTCTTGGTAATGCATTCTCCTCCACTAACACTCACATTCACACAAACAAACA CCGTTGTCATCAGATTCTCAATTTCATGCAACTCACTCACTCCCTCATATTATAAATTAAGCCCACATTAACCAAACACC ACACTCTTCACAACACCACATAACTCACTTAATCACACCATGGCACACAACAATGAAACCAAGCCTTCTTCTCTTCACGT GGAAGCCCCACCACCAGTACCACCGGAGGAACCTAGTCCTCTCCAGAAGATCATCGCCGTGGCTTCAATCGCTGCCGGCG TGCAATTCGGGTGGGCCCTGCAACTATCCCTACTCACCCCCTACGTCCAGTTACTCGGAATACATCACAATCAAGCAAAC TTAATCTGGCTCTGCGGCCCAATCTCCGGCATTCTAGTCCAGCCCATCGTCGGCTACCACAGCGACCGCTGCACCTCCCG CTTCGGCCGCCGCCGTCCCTTCATCACCGTCGGAGCATTCGCCGTCGTCATCGCCGCCTTCCTTATCGCCTACTCCGCAG ACATCGGTCACTCCACTGGAGACTCCATCACCAGAAAAGCTCGTCCCCGCGCCATCGCCGTCTTCGTCGTCGGATTCTGG ATCTTCGATGTCGCAAACAACATGCTCCAAGGCCCGCTCCGCGCCTTCCTCGCCGACCTAGCCGCCGGCGACCGACGCAA AACTCGCACAGCAAACTCCTTCTATTCCTTCTTCATGGCGATCGGAAATGTTGGCGGCTATGCTGCCGGCGCCAACGGCA AACTCTACCACCGTTTCCCCTTCACCAAGACAATCGCCTGTGATGCCTCGTGCGCGAACCTGAAGAGCTGTTTCTTCATC TCTGTCACTCTTCTCTTGATTCTCGCCACCGGAGCGATGATCTACGTGAAGGAGCAACCGCAAACGGCGCTGTTTCAGAA AACCGACGACAGTTACGGCGGTGATGATGGTGATCACGCTCACGCGGGTGGCATGCGCTGCTTTGGGGAATTATTCGGTG CGTTTCGCACCCTGAAGAGACCCATGTGGATCCTTCTGTTGGTGACGTGTCTGAATTGGTTAGCGTGGTTTCCGTTTTTT CAGTTTGATACTGATTACGTGGGGAGAGAGGTGTACGGTGGGGAAGTTAGACAACCAATTTATAACGCGGGGGTGCGATT GGGTACGTTCGGGCTCATGTTAAACTCGGTGGTCCTCGCTGCGACGTCGTTGGGGATGGAAGCGTTGTCGCGTGGGGTTG GCGGAGTTAAGCGGTTGTGGGGGATCGTTAACTTGCTGCTTGCGGTTGGTTTGGGTATGACTGTTTTGGTGGCCAAGCTG GCGAAGCAGTCGCGTCATTATGGCGGCGTCAGCGAGTTGCTACCGCCTGACGGTGGCATCAAGGCCGGCACGTTGGTTCT CTTTACTATCCTTGGCATCCCACTCGCGGTAAATTTCTTTGCAATTTCAAATATTTTCCTAATATTTATTTCTTAAATTT ATTGAAACTTTTTTCGGGCACAATGTCAGAAAAAGAAATTCAAAATATTAATTGGTAGAAATTCAAAATAATTTTTTTTA GTGCATGGGAAAAAAGAAATTCAAAATAATAACTAATAACATTTGTTTTCTATTTTTTTGTTCTCTTAGGTGATAGTGAG GGATTAAGATCTTCTCTGTTCTGTTTCTCTTTCCCTATTCCACTAATTGCATTGTGACACATTATTTTAAAATTACCCTA TAATAAGGCTATAGCTGTAATATTCATGTATTTTATTTTTTTCCGATGAAGCCAAAAAATATATTTATGTATTTTTTTCC GATGAAGCCAAAAAATATATTTATTATATTATATGGCACAATGTGATCTGTGAGATGGGCTGAGACACAAAACAGGACAC ATGATTTCAGTAGTCCGATACTGAGGGGCATTGGGTTCCAACTAGTAAAAACAAAATAGGACCACAACTTTTACACAAAG TTGAAGACTATGCTAATTTGCTTCTCCAAATCAATAAATTCTATTTGGACTTCAATTGGAATTTCATTTCTTTTTGTTTG GCTGCTGTTTTTGGTTGAGCTGGAAGGAAAACAATAATCAATTTGTTTTGAACTTTTTTCTTTGATTGTGATTTCGTTTG ATTATGAACTTTGAGTTTAAATAAAATTATTTGATTGTGACACATAGTTACTGAACAACATGATTTTTTATTTTAAATTA AAATTATTTGACCCAAAAATATTATTGGATGTCACAGAAAAATTTTATACATCAAGTTAAATATTAATGGATGTATGTAC CCAAAAAAAAATATTAATGGATGTACTAACTAATCAATAGATTAATAGAAAATAATAAATTTGAATATTTAAAACCATGA TATTTGAAGAGTAAATGAAACCTGTGTAGAGCATATGATTGAACTAATTTTACATAAGCATGCATTTATATTGATTGTAA AAACTATTCCATCATAACATTCTCTAATTGAATAATTAGATGCACCTTCTGAAATTATTTTATTAAATTAACTTTTGTTC TCTAATTCATCTCTTTTTTATTTTCTTTTAAAATATTATCATTAGAGTTATTATGCACAAAACGAATATTAATAAATTTA GAAATAGTACTGAAAAACCAACACTCTTTGTTGTGCACGTACTGTTCAGGTTACTTACAGCATACCCTTTGCTCTAGCAT CAATATTCTCCAGCACCACTGGGGCAGGCCAAGGTAAGACATTCATAACCACTCAATTAAACAACTTACCAATGGAGGGT CTATTATTCACAAGGTTCATCTTAAACAATAATGCATAACCTCATTTTATGTTCAAACTTTTCAGGGTTATCTCTAGGAG TTCTGAATATTTCAATTGCCATACCACAGGTTAGAATTAAGTTCACTTCATATATATTTTCCAAGTAATAACTTCATTTT ATATGCTCAAATCTTCATTATTATTGGCTAATTATGATTATATGTGCACATAGATGGTGGTGTCTCTTGCCATTGGAAAA TGGAATGACCAATTTGGAGGAGGTAATTTGCCAGCTTTTGTGGCGGGTGCTGTGGCGGCTGCAGCCAGTGGCATTTTATC CTTAGTCCTACTGCCGTCTCCACCGCCGGATTTGGCCAAGGCTGTAACTGCTGCCGGAGGAGGCTTCCATTAAGCAGGGG GAACATTTTCAGCTCTCCTTCTTGTCCCCATGTGAGAAAATGAGTATGGTTTTTATTTGGAGGTATTAGGCTTTTAGAAC CCAACAAATTCTACAATATATTGCCATTTTTTGTGGCACAAGTGACTATTTAATAACAGTCATTTTAAGTGGAGTTTGTT GTGGCTGTACATATCCATGTTGAAGCTGGACTCAGCTCTGTATTTATGTAGTTTGGTACATTTTGGGTGCTTAGAGGAAT GTAGTGTTGAAGCAAGCGTGCATGAAGGGTAGTCCTTTAGTAAAAAGTGTGGGGAGAAAATCCTGAATAGTGAATAGGAC TAGACTATAGTTTCCTATTCCCCACTCACTTTCCACTGTCTTCTTTGATGATTACTAGTAGTACTGTAATAACAATCACT TTTCTTTCCATCACAGAGAAAGGGAAGCCTATGTAGTTGCATGTCTTAATAAGGGCAATGATTGCTCAAAGTGTTATAGA GTTCATTAAGCCTTGATTTTATGAACCATGTTTGTTATTAACTATGAAAATGCACAGGGTTCAAAATAGTTATTAGTTTG AGGGTTTTATTGTAAATAGAAGAGTTGATAGTTGGAGCTTTATATAGCTCATTAGTGTGTAATCAATTTAGATTGTGATA TTAGAATAACAGGAAAAAAAAA
CDS sequence (LotjaGi5g1v0281800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCACACAACAATGAAACCAAGCCTTCTTCTCTTCACGTGGAAGCCCCACCACCAGTACCACCGGAGGAACCTAGTCC TCTCCAGAAGATCATCGCCGTGGCTTCAATCGCTGCCGGCGTGCAATTCGGGTGGGCCCTGCAACTATCCCTACTCACCC CCTACGTCCAGTTACTCGGAATACATCACAATCAAGCAAACTTAATCTGGCTCTGCGGCCCAATCTCCGGCATTCTAGTC CAGCCCATCGTCGGCTACCACAGCGACCGCTGCACCTCCCGCTTCGGCCGCCGCCGTCCCTTCATCACCGTCGGAGCATT CGCCGTCGTCATCGCCGCCTTCCTTATCGCCTACTCCGCAGACATCGGTCACTCCACTGGAGACTCCATCACCAGAAAAG CTCGTCCCCGCGCCATCGCCGTCTTCGTCGTCGGATTCTGGATCTTCGATGTCGCAAACAACATGCTCCAAGGCCCGCTC CGCGCCTTCCTCGCCGACCTAGCCGCCGGCGACCGACGCAAAACTCGCACAGCAAACTCCTTCTATTCCTTCTTCATGGC GATCGGAAATGTTGGCGGCTATGCTGCCGGCGCCAACGGCAAACTCTACCACCGTTTCCCCTTCACCAAGACAATCGCCT GTGATGCCTCGTGCGCGAACCTGAAGAGCTGTTTCTTCATCTCTGTCACTCTTCTCTTGATTCTCGCCACCGGAGCGATG ATCTACGTGAAGGAGCAACCGCAAACGGCGCTGTTTCAGAAAACCGACGACAGTTACGGCGGTGATGATGGTGATCACGC TCACGCGGGTGGCATGCGCTGCTTTGGGGAATTATTCGGTGCGTTTCGCACCCTGAAGAGACCCATGTGGATCCTTCTGT TGGTGACGTGTCTGAATTGGTTAGCGTGGTTTCCGTTTTTTCAGTTTGATACTGATTACGTGGGGAGAGAGGTGTACGGT GGGGAAGTTAGACAACCAATTTATAACGCGGGGGTGCGATTGGGTACGTTCGGGCTCATGTTAAACTCGGTGGTCCTCGC TGCGACGTCGTTGGGGATGGAAGCGTTGTCGCGTGGGGTTGGCGGAGTTAAGCGGTTGTGGGGGATCGTTAACTTGCTGC TTGCGGTTGGTTTGGGTATGACTGTTTTGGTGGCCAAGCTGGCGAAGCAGTCGCGTCATTATGGCGGCGTCAGCGAGTTG CTACCGCCTGACGGTGGCATCAAGGCCGGCACGTTGGTTCTCTTTACTATCCTTGGCATCCCACTCGCGGTTACTTACAG CATACCCTTTGCTCTAGCATCAATATTCTCCAGCACCACTGGGGCAGGCCAAGGGTTATCTCTAGGAGTTCTGAATATTT CAATTGCCATACCACAGATGGTGGTGTCTCTTGCCATTGGAAAATGGAATGACCAATTTGGAGGAGGTAATTTGCCAGCT TTTGTGGCGGGTGCTGTGGCGGCTGCAGCCAGTGGCATTTTATCCTTAGTCCTACTGCCGTCTCCACCGCCGGATTTGGC CAAGGCTGTAACTGCTGCCGGAGGAGGCTTCCATTAA
Protein sequence (LotjaGi5g1v0281800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAHNNETKPSSLHVEAPPPVPPEEPSPLQKIIAVASIAAGVQFGWALQLSLLTPYVQLLGIHHNQANLIWLCGPISGILV QPIVGYHSDRCTSRFGRRRPFITVGAFAVVIAAFLIAYSADIGHSTGDSITRKARPRAIAVFVVGFWIFDVANNMLQGPL RAFLADLAAGDRRKTRTANSFYSFFMAIGNVGGYAAGANGKLYHRFPFTKTIACDASCANLKSCFFISVTLLLILATGAM IYVKEQPQTALFQKTDDSYGGDDGDHAHAGGMRCFGELFGAFRTLKRPMWILLLVTCLNWLAWFPFFQFDTDYVGREVYG GEVRQPIYNAGVRLGTFGLMLNSVVLAATSLGMEALSRGVGGVKRLWGIVNLLLAVGLGMTVLVAKLAKQSRHYGGVSEL LPPDGGIKAGTLVLFTILGIPLAVTYSIPFALASIFSSTTGAGQGLSLGVLNISIAIPQMVVSLAIGKWNDQFGGGNLPA FVAGAVAAAASGILSLVLLPSPPPDLAKAVTAAGGGFH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 30 | 30 | - | – | |
| PANTHER | 4 | 518 | 515 | 2.5E-225 | – | |
| PANTHER | 4 | 518 | 515 | 2.5E-225 | – | |
| TIGRFAM | 27 | 504 | 478 | 1.3E-226 | ||
| Gene3D | 29 | 258 | 230 | 4.9E-17 | – | |
| TMHMM | 31 | 53 | 23 | - | – | |
| CDD | 31 | 478 | 448 | 8.48967E-109 | – | |
| Phobius | 31 | 56 | 26 | - | – | |
| SUPERFAMILY | 31 | 503 | 473 | 5.62E-28 | ||
| Pfam | 38 | 304 | 267 | 2.5E-9 | – | |
| Phobius | 57 | 67 | 11 | - | – | |
| TMHMM | 66 | 85 | 20 | - | – | |
| Phobius | 68 | 88 | 21 | - | – | |
| Phobius | 89 | 99 | 11 | - | – | |
| Phobius | 100 | 118 | 19 | - | – | |
| TMHMM | 100 | 119 | 20 | - | – | |
| Phobius | 119 | 137 | 19 | - | – | |
| Phobius | 138 | 156 | 19 | - | – | |
| TMHMM | 139 | 161 | 23 | - | – | |
| Phobius | 157 | 176 | 20 | - | – | |
| Phobius | 177 | 197 | 21 | - | – | |
| TMHMM | 181 | 203 | 23 | - | – | |
| Phobius | 198 | 224 | 27 | - | – | |
| TMHMM | 224 | 243 | 20 | - | – | |
| Phobius | 225 | 243 | 19 | - | – | |
| Phobius | 244 | 288 | 45 | - | – | |
| TMHMM | 288 | 307 | 20 | - | – | |
| Phobius | 289 | 307 | 19 | - | – | |
| Phobius | 308 | 326 | 19 | - | – | |
| Phobius | 327 | 348 | 22 | - | – | |
| TMHMM | 334 | 356 | 23 | - | – | |
| Phobius | 349 | 368 | 20 | - | – | |
| TMHMM | 366 | 388 | 23 | - | – | |
| Phobius | 369 | 389 | 21 | - | – | |
| Phobius | 390 | 408 | 19 | - | – | |
| Phobius | 409 | 433 | 25 | - | – | |
| TMHMM | 413 | 435 | 23 | - | – | |
| Phobius | 434 | 444 | 11 | - | – | |
| TMHMM | 445 | 467 | 23 | - | – | |
| Phobius | 445 | 466 | 22 | - | – | |
| Phobius | 467 | 477 | 11 | - | – | |
| Phobius | 478 | 499 | 22 | - | – | |
| TMHMM | 480 | 499 | 20 | - | – | |
| Phobius | 500 | 518 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Sucrose transmembrane transporter activity | Enables the transfer of sucrose from one side of a membrane to the other. Sucrose is the disaccharide O-beta-D-fructofuranosyl-(2->1)-alpha-D-glucopyranoside, a sweet-tasting, non-reducing sugar isolated industrially from sugar beet or sugar cane. | ||
| Biological process | Sucrose transport | The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside. |
Expression pattern of LotjaGi5g1v0281800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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