Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0281900 |
| Transcript ID | LotjaGi5g1v0281900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Sucrose transporter; TAIR: AT1G22710.1 sucrose-proton symporter 2; Swiss-Prot: sp|Q39231|SUC2_ARATH Sucrose transport protein SUC2; TrEMBL-Plants: tr|Q9XHL6|Q9XHL6_PEA Sucrose transport protein SUT1; Found in the gene: LotjaGi5g1v0281900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:59813754..59817463) extracted from Lotus japonicus Gifu genome v1.2.
AACAACCCATCAATTATGCAAAGTGAGAGAGAAGCAATGTAAATAAAAGAAAAAGAGAAAGAAAAGCAGAATGTACTAAG ATTTACATTGTAAAAAATAAAATATTTATCCATATATATTTATAATAATTAATAGATTCATAATCTTAACTATAAGCAAA CAAACAAATCAATCTAACAAACATTCTAAAGTACCTAAAAGAAACTCAAGAAATATTAAATTAAGATAATCTATGATATT GATATATATCATTCTAATATCCCCTAACCAACTTGCTACTTGGTGAGGAAATTACTAACAAATTACTTGTTGAGGAAATT ATCCATTCCTTTTCACCCTACCACTCACACTCATATTGTTCTCAAAAAGCAAACCAAATCAGATTCTCTTCTCTATAAAA CATTACATGCAACCAACTCTCACTCTCCCTCCATCCCACACTATAAAACCCCCCACCACCTCAACACCAAACACAACCCC AAAACGCAAACACTCACTATGGAGCCTCTTTCCAAACACAACAACCTCAAGCCTTCCTCACTCCACGTAGAAGCACCACC ACCGGAGGCAAGTCCTCTCCGCAAAATCATCGTCGTCGCTTCCATCGCGGCCGGTGTCCAATTCGGTTGGGCCCTACAAC TTTCCCTACTCACCCCATATGTCCAACTTCTTGGAATCCCACACAAATGGGCCGCATACATCTGGCTCTGCGGCCCAATC TCTGGCATGCTGGTCCAGCCCATCGTCGGTTACCACAGCGACCGCTGCACTTCACGCTTCGGCCGCCGCCGTCCCTTCAT CGCCGCCGGCGCACTCGCCGTCGCCATCGCCGTCTTCCTCATCGGCTACGCCGCCGACTTCGGCCACGCCTTAGGCGACA GGCTTGACAAGAAGATTCGCACCCGCGCCATCGCCATCTTCATCGTCGGATTCTGGATCCTCGACGTCGCCAACAACATG CTCCAAGGCCCCTGCCGCGCTCTCCTCGCCGACCTCTCCGCCGGCGACCACCGCAAAACACGAACCGCGAATTCGTTCTT CTCATTCTTCATGGCCGTCGGGAACGTTCTCGGCTACGCTGCCGGAGCATACAGCAAGCTCTACCATGTCTTCCCGTTCA CGAAAACCACCGCCTGCGATGTCTACTGCGCGAATCTCAAAAGCTGCTTCTTCCTCTCAATCGCACTTCTCACAACTCTC GCCACCGCCGCGCTGGTCTACGTGAAGGAAGTTCCACTCTCGCCGGAGAAGGCGGTTATCGATTCCGACGATAACGGTGG CATGCCGTGCTTCGGGCAGTTATCCGGCGCGTTTCGCGAATTGAAGAGGCCGATGTGGATCCTTCTGCTCGTGACTTGCC TCAATTGGATCGCGTGGTTCCCATTCTTGCTGTTCGACACCGATTGGATGGGGAAGGAAGTGTACGGCGGAGAAGTTGGG GATCACGCCTATGATCAGGGTGTTCACGCCGGTGCTCTTGGCCTCATGCTGAACTCGGTGGTGCTCGGAGCGACGTCGTT GGGGTTGGAGTATCTGGCGCGCGGGGTTGGTGGCGTGAAGAGGTTATGGGGAATTGTCAACTTCTTGCTCGCAATTTGCC TCGGTTTAACCGTTCTCGTCACCAAGCTCGCCGAGCATTCCCGGCAATACACCACCGTGCACGGCCACCAGGAACCTCTG CCTCCTTCCGGTGGCATCAAGGCCGGCGCCTTAACCCTCTTCTCCGTCCTCGGAATCCCCCTCGCCGTAAGTATCTAACT TGCAATTTTGAATTATTTTCCTAATTAATTCATTTTTGAAATATGTACATGATTAAATTAATACTAATTAGGGTATGGGA GCTAGATTATAGACAAAAAGTGAGGTTACATAATTAATAATTTTTAATTTCCATGTTACTGTAAGACAATAGTAAAGTTA AACTACTTTAGCTATATTTAGTATTTATTTATTGATTTATTTATTGAGCTTATAAAAAAAAAGTATTTATTTATTGAATT ATTTTAGTAAAAGGGATTGGACTTGGAGGAGCAAATTTTTCAATTTTCATGCATGGAAGAAATCATGTGAATGTTATGAA TATGATCTGTGAGATTCTCTTTGGTTTTTTTGTGGCTGATAGTACAGAGCATTCAGTGTCTGGTTCAGTGAAAACAAAAC AGGGCTTTGAATTTTACACAGGCTTAATTGAACTTTGATTCTGAACTTGACAAATTTTGTTTGGATTCATTTTGGAAAAA CAAACTTTGCTTGGTTGTTTCCTTTTGTTTGAATTGGAAAGGACAATAATCAAACAATTGTGAAAAAAATAATAATTGTG ATTCCTTTTGAGTTTGATCATGAACTGTCAATTTAATTATAGTTACCAAACAGCAAGCCAACCTTGATCATTTTTAATAA TTTTGGAATAATTAAAAGTGTAGACAGGGTTGGCAACATATATACCCTATCCTGATTTAACCCTTTCAATAAATTAAATG AAAGATACCACCCATTCACATATCCAAAGTTTGAGGTCAGATTTTATGTACAGTTCATTGTATTCAATGGATTGAACTTT TTCATTGCAATTTCCTAACAGTAACCTAGCTTAAAGTAACATACAAATCTACTTCTTTAGCTTTCTTCAATTATCCATTC TATTTCCAAAGAGGAAATAGTTAAAAGCAAGCATAAGAAAAGTTACAAAACTTTATGCTGTGTAGTGTGTAAGATACATG GTTTTAATAAACTAACACTCTGTTGTGCATGTGTTCAGATCACTTACAGCATACCTTTTGCTCTAGCTTCTATATTCTCC AGCACCTCAGGGGCAGGCCAAGGTAGGACAATCATGGAACCCACTTAGCTAAATAATTTCAATTCAAGACCTTATCTTAA TCAAACAAAAATTGTTAACTTTGAATTTGTGTTCAAATGTTTCAGGGCTATCTCTAGGAGTGCTGAATCTTGCAATTGTC ATACCACAGGTAGAATCAAGTTCACTTCATATTTATCCACCTAATACTTAATTTTGTTTATTCATATCTTGTTTTGTGAA ATTTTTGTGACTAATTTTGAGTGCACCTGTATACAGATGTTGGTGTCAGTATCCAGTGGAAACTGGGATGATCTCTTTGG CGGCGGGAACTTGCCGGCGTTCGTGGTGGGTGCTGTGGCAGCTGCTATTAGTGGCATATTATCAATGGTTCTTCTGCCGT CTCCGCCGCCCGATTTGGTCAAGGCTGCAACCGCTTCCGGAGGAGGCTTCCATTAATCAGCAGGAACATTTTCATGACCT CTCCATTTTGTCGCCGTGTTTTAATATGCGAAAATGAGAACGTTTTTTATCTGGAACCGTTCTGTATAAGTTTTTTTTAG ATCCCAACAAGTGCTGAAAGTAGCCATTTTTGTGGCATCATCAATGACTAATAACACAGAAGTCATCATTTTAATTGTAA AGCTTGATGTGGCTGTATATAACCCTGTTCAATCAGGACCCAGCCCTGTCTTTTTAATTTATCTGATATTTAGTGCAATT TGGGTGTTGAGGGGAATGTAGTGATGTTAAGCATGTATGGTTGGTTGGTTAATCCATCAATAATGTTTCTGGGATGTAAA GTTCTGAATTGGACTAGACTACTTTCCTATTCTCCACTCACTTTCCATTGTCTTCTCATCTTGTTTAATTACTAGCACTA CAATTAATCACAATCTCTCTTATTCCCATC
CDS sequence (LotjaGi5g1v0281900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGCCTCTTTCCAAACACAACAACCTCAAGCCTTCCTCACTCCACGTAGAAGCACCACCACCGGAGGCAAGTCCTCT CCGCAAAATCATCGTCGTCGCTTCCATCGCGGCCGGTGTCCAATTCGGTTGGGCCCTACAACTTTCCCTACTCACCCCAT ATGTCCAACTTCTTGGAATCCCACACAAATGGGCCGCATACATCTGGCTCTGCGGCCCAATCTCTGGCATGCTGGTCCAG CCCATCGTCGGTTACCACAGCGACCGCTGCACTTCACGCTTCGGCCGCCGCCGTCCCTTCATCGCCGCCGGCGCACTCGC CGTCGCCATCGCCGTCTTCCTCATCGGCTACGCCGCCGACTTCGGCCACGCCTTAGGCGACAGGCTTGACAAGAAGATTC GCACCCGCGCCATCGCCATCTTCATCGTCGGATTCTGGATCCTCGACGTCGCCAACAACATGCTCCAAGGCCCCTGCCGC GCTCTCCTCGCCGACCTCTCCGCCGGCGACCACCGCAAAACACGAACCGCGAATTCGTTCTTCTCATTCTTCATGGCCGT CGGGAACGTTCTCGGCTACGCTGCCGGAGCATACAGCAAGCTCTACCATGTCTTCCCGTTCACGAAAACCACCGCCTGCG ATGTCTACTGCGCGAATCTCAAAAGCTGCTTCTTCCTCTCAATCGCACTTCTCACAACTCTCGCCACCGCCGCGCTGGTC TACGTGAAGGAAGTTCCACTCTCGCCGGAGAAGGCGGTTATCGATTCCGACGATAACGGTGGCATGCCGTGCTTCGGGCA GTTATCCGGCGCGTTTCGCGAATTGAAGAGGCCGATGTGGATCCTTCTGCTCGTGACTTGCCTCAATTGGATCGCGTGGT TCCCATTCTTGCTGTTCGACACCGATTGGATGGGGAAGGAAGTGTACGGCGGAGAAGTTGGGGATCACGCCTATGATCAG GGTGTTCACGCCGGTGCTCTTGGCCTCATGCTGAACTCGGTGGTGCTCGGAGCGACGTCGTTGGGGTTGGAGTATCTGGC GCGCGGGGTTGGTGGCGTGAAGAGGTTATGGGGAATTGTCAACTTCTTGCTCGCAATTTGCCTCGGTTTAACCGTTCTCG TCACCAAGCTCGCCGAGCATTCCCGGCAATACACCACCGTGCACGGCCACCAGGAACCTCTGCCTCCTTCCGGTGGCATC AAGGCCGGCGCCTTAACCCTCTTCTCCGTCCTCGGAATCCCCCTCGCCATCACTTACAGCATACCTTTTGCTCTAGCTTC TATATTCTCCAGCACCTCAGGGGCAGGCCAAGGGCTATCTCTAGGAGTGCTGAATCTTGCAATTGTCATACCACAGATGT TGGTGTCAGTATCCAGTGGAAACTGGGATGATCTCTTTGGCGGCGGGAACTTGCCGGCGTTCGTGGTGGGTGCTGTGGCA GCTGCTATTAGTGGCATATTATCAATGGTTCTTCTGCCGTCTCCGCCGCCCGATTTGGTCAAGGCTGCAACCGCTTCCGG AGGAGGCTTCCATTAA
Protein sequence (LotjaGi5g1v0281900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEPLSKHNNLKPSSLHVEAPPPEASPLRKIIVVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWAAYIWLCGPISGMLVQ PIVGYHSDRCTSRFGRRRPFIAAGALAVAIAVFLIGYAADFGHALGDRLDKKIRTRAIAIFIVGFWILDVANNMLQGPCR ALLADLSAGDHRKTRTANSFFSFFMAVGNVLGYAAGAYSKLYHVFPFTKTTACDVYCANLKSCFFLSIALLTTLATAALV YVKEVPLSPEKAVIDSDDNGGMPCFGQLSGAFRELKRPMWILLLVTCLNWIAWFPFLLFDTDWMGKEVYGGEVGDHAYDQ GVHAGALGLMLNSVVLGATSLGLEYLARGVGGVKRLWGIVNFLLAICLGLTVLVTKLAEHSRQYTTVHGHQEPLPPSGGI KAGALTLFSVLGIPLAITYSIPFALASIFSSTSGAGQGLSLGVLNLAIVIPQMLVSVSSGNWDDLFGGGNLPAFVVGAVA AAISGILSMVLLPSPPPDLVKAATASGGGFH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | - | – | |
| MobiDBLite | 1 | 22 | 22 | - | – | |
| PANTHER | 13 | 511 | 499 | 5.1E-251 | – | |
| PANTHER | 13 | 511 | 499 | 5.1E-251 | – | |
| TIGRFAM | 26 | 497 | 472 | 4.6E-250 | ||
| Gene3D | 27 | 249 | 223 | 3.7E-17 | – | |
| SUPERFAMILY | 28 | 496 | 469 | 7.19E-29 | ||
| Phobius | 30 | 52 | 23 | - | – | |
| CDD | 30 | 471 | 442 | 2.47614E-117 | – | |
| TMHMM | 32 | 54 | 23 | - | – | |
| Pfam | 37 | 292 | 256 | 6.4E-13 | – | |
| Phobius | 53 | 63 | 11 | - | – | |
| Phobius | 64 | 87 | 24 | - | – | |
| TMHMM | 64 | 86 | 23 | - | – | |
| Phobius | 88 | 98 | 11 | - | – | |
| TMHMM | 99 | 118 | 20 | - | – | |
| Phobius | 99 | 117 | 19 | - | – | |
| Phobius | 118 | 136 | 19 | - | – | |
| TMHMM | 133 | 155 | 23 | - | – | |
| Phobius | 137 | 155 | 19 | - | – | |
| Phobius | 156 | 175 | 20 | - | – | |
| TMHMM | 176 | 198 | 23 | - | – | |
| Phobius | 176 | 198 | 23 | - | – | |
| Phobius | 199 | 217 | 19 | - | – | |
| Phobius | 218 | 242 | 25 | - | – | |
| TMHMM | 223 | 242 | 20 | - | – | |
| Phobius | 243 | 278 | 36 | - | – | |
| Phobius | 279 | 299 | 21 | - | – | |
| TMHMM | 280 | 299 | 20 | - | – | |
| Phobius | 300 | 325 | 26 | - | – | |
| TMHMM | 321 | 343 | 23 | - | – | |
| Phobius | 326 | 347 | 22 | - | – | |
| Phobius | 348 | 358 | 11 | - | – | |
| TMHMM | 356 | 378 | 23 | - | – | |
| Phobius | 359 | 378 | 20 | - | – | |
| Phobius | 379 | 397 | 19 | - | – | |
| Phobius | 398 | 426 | 29 | - | – | |
| TMHMM | 404 | 426 | 23 | - | – | |
| Phobius | 427 | 437 | 11 | - | – | |
| TMHMM | 433 | 455 | 23 | - | – | |
| Phobius | 438 | 459 | 22 | - | – | |
| Phobius | 460 | 470 | 11 | - | – | |
| TMHMM | 470 | 492 | 23 | - | – | |
| Phobius | 471 | 492 | 22 | - | – | |
| Phobius | 493 | 511 | 19 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of plasma membrane | The component of the plasma membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Sucrose transmembrane transporter activity | Enables the transfer of sucrose from one side of a membrane to the other. Sucrose is the disaccharide O-beta-D-fructofuranosyl-(2->1)-alpha-D-glucopyranoside, a sweet-tasting, non-reducing sugar isolated industrially from sugar beet or sugar cane. | ||
| Biological process | Sucrose transport | The directed movement of sucrose into, out of or within a cell, or between cells by means of some agent such as a transporter or pore. Sucrose is the disaccharide fructofuranosyl-glucopyranoside. |
Expression pattern of LotjaGi5g1v0281900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…