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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0287400 |
| Transcript ID | LotjaGi5g1v0287400.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Choline/ethanolamine kinase; TAIR: AT1G71697.1 choline kinase 1; Swiss-Prot: sp|Q9M9H6|CK1_ARATH Probable choline kinase 1; TrEMBL-Plants: tr|I3SYS4|I3SYS4_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0287400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:60427148..60431449) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCTGTTAAGACAATTGAATTGCTGAAAGGAAGTGCATCAATTGAAGAGATAATTGAGGTTCTGACAACAGTGGCTTC GGATTTGGGGGATGATGTGGTCGATGATTTGAGCACTTTGCAGGTGATTCCATTGAAAGGTGCAATGACCAATGAGGTTT TCCAGGTAAATTGGCCAACAAAAAATGGTGATGATCTGAGAAAGGTGCTGGTTCGATTGTATGGCGATGGTGTTGAAATT TTCTTCGACAGGGAGGAAGAAATTCGAACCTTTGAGTGCGTTTCAGAACATGGTCAGGGGCCACGCCTTCTTGGTCGGTT CACCTGTGGCAGAGTAGAGGAGTTCATTCATGCTAGGGTATGTCATTATCTTCTTCTTTTGTTCTATAATATTTTTATTT ATTAAATAACTTTATAGGTATGTTTCAGTAGAAAATTATCATTGATAGGTACTTAGCTAGGTAGATATATAATTGGAGTT GAATTTCTTTTTGCCTGGTTTAAAATTGGGGTTGGCGTTGCAGTGTAAAATTGCGGATAAATTCAGGTTGATGCAGTCCT CTAATTGCAATGCTGTTGCGGGTCTGACCACAATTGCACTTGCGGATTACAATTTGAAATTTTGACTTTGTCAACCCATC ATGTTTTAAGGGTACAAGTTGAGAATATTACTATAAAATGTATTCCTCCATTCACATATTGACACATGTTTCATGTTTTA TGAATAGTTAGTTTTAGGCATCATATGAAAAATTTGGTTTTATATACATCATCACTGTCATGACTAAGATATTGTTGAAG AAGTCAACAAATATAAATTATTTATTAATTTTTATAATTACTTATTTAAAAGGACAGTATTTAATATATCAGTAGCAATA AAGGGAGATTATTAAAAATATTTATTACTCAGTCAATAGTAAAAAATAGTCAATTGACTAATGCTCTTATTTAATTTTTT GATCGTGACTAATGCTCTTAACTTATAATCCTGAATATTTGGGTGCATTTAATATTATTATTTAAAGAGTGAACCCCATT TTCTTGCCCAACTCATCAAATTAGTCCCAATACTAAGGAAAATACAAAAAAGCCCTCAACTTATTCTTGCCATTTATTTT CTTTCATTACAGTTTTTGAAACTGTGTTTTCTAATTTAAAAAACTGAAAATTTAAAACATGTTCGTTTTTAAAATATATC TTTCAAAATCATTTTCAATTTCAATTTCTAAAACTAAAATACTAGAATAATTAAAATATATTTTATGTTTCAATTTTTAG TTTTCAAATTACAATTTTTTAATGTTGAAAAAAATCTCATTCAAACAATTTTTTATTTATTAAAAACACTTTCTAAAAAT AGTTTAACTATAGTTTTAAAAAACTGCAATCAAACGTTTACTTAATTCTTTGTGAATGACTAATGTGATTAACCAAAACA AAGATAGATAAGTGTTGGTCTAGTGGTGAGTGTTGTCTACGTATCTGTAAGTGTGAGAACATAAGTTTGAATCATTTGTT GTGGTTGACTGCTACATCTCTCTACTGATTAAAGAAAAAACAACAACTTAACACGTGAGTAACTGTGGGTTTGAGTGTTA GATTGCCTTTATTAAGTTATGAATTAATTTGAGGATCATTATCCAGTTTGGAATAAATTTGGGTCATTATTTTCAAAGTG GGTTAAGGCTTGTTATTAGTAGGTTATCCTTTGAGAAATATGGAGGTCTGTGTAAGAACCAAATGCCAGTCACCCTTCAC CATAAATTTAGTTTATATGAAAATAGAAAAATAGAACCCAGGACTAATTCAATTTATGTTTGAGCTTTGAGACTATATGC TCAGTTTGAAAGTTAAGTTACTTTATTCTTTAGTCAAGAGGAACTTTTCTTTTTGTCGTACTTTCTATTTTTCTTATTTT ATTCCCTTTTGGAACAATGAAGGGTAACCAGTACTTGTTAGTTGTCATTAGGAATAACTAATAATTAAGAAGCATCTTTA AGAAACTCAATTGAATGGTGTTGAGTCAATGGAACAGGATCAGGTGCTCTGCTCTTAGGTGCTTCTTTAACCATTCTTTT CCCCTAACTTCTTTCCTAAATATTATTTATTCCACTTAATAATAAAGAATTTTCAAAAAACTTAATAATAAAACAAATAT ACTAAGAACACCTTATTCAAAGGTCATCTGAGATTTTTTATTCATGCTCATGCATGGAAAGATCAGACTTGAGAGATCTT ATTTCCTGACTATTTCAGTCATAATATTATGAAGGGGAAAAATATATTGAACAAATTTAAAGGTGAGCACCTAAGTATTG AGTTCTAATGGTGATTAAAATCAATGAAAATTTTGTTTCAGAATTTAAAATCAATTAAGGTTATGTTTCAGTCATCATAA CTTGGTAGGCCTAATACCTCATCAGTATATCACTATGGGCTATGGTTTTCCTTGAGACCATCCACTCAGTGGTTTTATAC TGTTAAATCTGTTCCTTTCTATCTGCTGTTGATGTTACTTTCTAATTTCCAATTGATTAAACTTTAAAATCAACTGAAGG AGTCTTAGAAAAACAAAAATGATGAATCTGGCATGGTCTTTTGCACTCCTAGTATAACAATTGTGCATAACAAGTTTTTA TCTTTTTTTTTAGACTCTCTTGGCTGCTGACCTCCGCGACCCTGACATATCTGCTTTGATAGCATCTAAGATGAGAGAGT TCCACAACCTTCATATGCCTGGTGCAAAGAAGGTTCAGATTTGGGAGAGAATGAGGTAAATATAAATCAAATCAATATTC AAACCCATATTTGTCTCTATGCAGAATATTAAATGCTCTCCACATGTTATTTACTAGGAAGTGGCTTGGTGAAGCCAAAA GTTTGTGCTCCCCAAAGGATGCAACATTTTTTGGCTTGGAGAATCTGGATGAGGAAATAAATAGCCTTGAGAAGAAGTTA TCTGAAGGATATCAAGAGATTGGTTTTTGTCACAATGACCTGCAATATGGTAACATAATGATGGATGAAGAGACAAGATC ACTAACTATAATTGTGAGTTGTGGCTGTAAATTATTTACCTCTGGTTTCCCCTGTTCCATATTTTTTGTTCCTGTTCTAA TATTTTTAATGATGCAGGATTATGAATATGCGAGTTACAATCCTATTGCATATGACCTGGCAAATCATTTCTGTGAAATG GTGGCTGATTACCACAGTGACACACCTCATGTTCTTGACTACAGCAAATATCCTGGTAAAGTTTTGGTTTGTAATATTTT GATTGCTCGGTGAGATCTTTCTGCAATGCTAACACATCAATTTGCATATGTTAAAACAGGACTAGAGGAGCGTCAAAGGT TTATCCGTATCTACCTGAGTTCTCAAGGTGAGTCCAGTGACCTGTCCACTCCTTATCTCTATTTATTGTTTCTATACTTT TAGCATCTTTAAGCCAAAGCACAAGGAGACTTATATATGCAAAATGCCGAGACTAATTCTTTAACATAGAGCAAATTTTG CATAAGCACACTGTCTATAGGTACAAGTGATAAAAAGCTCAATGTATTTTCAAATTTAAAAAATAATCATTACTGATGTT GGTGTTATTGTATATTTTCTTGAACTTTTCATTAGTTGTATCTATAGACACTGATATCATACAAAAACTACTCCAGTCTG TGCTTTATGCGTAGCTTACATTCATTTGTTTTAATTTAAGCTTTAATTAATTAGATTACTTATCAAATTAGCTCATGAAC TCTACATTTTGAGTGTGATGTCTCATTCAGTCTTCAACTTCATGCCATGCTAATGTAGCTCTAAGAATCATTTCATGCAG GTCCAAAGTGATATGGCATACAGCCTGTCAAAACTCATAATCATGTTATTGAAGTTTAAATCATACCTAAATGCTTCTGA ATCTCATATAATTGTTTCTCAAATTTATTTGTCAATTCCTTGTATACATGCAGGCAAGAAACCCAACAATGCTAAAGTGA TCCAGTTAGTGAATGCTGCAGAAAAATACACGCTCGCAAACCATCTATTTTGGGGCTTGTGGGGACTTATTTCTGTAAGT TTCTGGTTACTTTAAACAATGTTGTCACCTTGAAATTCTAGCTATGTATGCTCATATATATTTTTACATGTGATTGCAGA GTTATGTCAATAAAATTGACTTTGATTACAAAGAGTATGCAAGACAGAGGTTTCAACAATACTGGTTGAGGAAGCCTACC TTATTGGACACACAAAGCATCCAACTATGAATTGCTAATTTTTAACTATCAATAACATCTAA
CDS sequence (LotjaGi5g1v0287400.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTGTTAAGACAATTGAATTGCTGAAAGGAAGTGCATCAATTGAAGAGATAATTGAGGTTCTGACAACAGTGGCTTC GGATTTGGGGGATGATGTGGTCGATGATTTGAGCACTTTGCAGGTGATTCCATTGAAAGGTGCAATGACCAATGAGGTTT TCCAGGTAAATTGGCCAACAAAAAATGGTGATGATCTGAGAAAGGTGCTGGTTCGATTGTATGGCGATGGTGTTGAAATT TTCTTCGACAGGGAGGAAGAAATTCGAACCTTTGAGTGCGTTTCAGAACATGGTCAGGGGCCACGCCTTCTTGGTCGGTT CACCTGTGGCAGAGTAGAGGAGTTCATTCATGCTAGGACTCTCTTGGCTGCTGACCTCCGCGACCCTGACATATCTGCTT TGATAGCATCTAAGATGAGAGAGTTCCACAACCTTCATATGCCTGGTGCAAAGAAGGTTCAGATTTGGGAGAGAATGAGG AAGTGGCTTGGTGAAGCCAAAAGTTTGTGCTCCCCAAAGGATGCAACATTTTTTGGCTTGGAGAATCTGGATGAGGAAAT AAATAGCCTTGAGAAGAAGTTATCTGAAGGATATCAAGAGATTGGTTTTTGTCACAATGACCTGCAATATGGTAACATAA TGATGGATGAAGAGACAAGATCACTAACTATAATTGATTATGAATATGCGAGTTACAATCCTATTGCATATGACCTGGCA AATCATTTCTGTGAAATGGTGGCTGATTACCACAGTGACACACCTCATGTTCTTGACTACAGCAAATATCCTGGACTAGA GGAGCGTCAAAGGTTTATCCGTATCTACCTGAGTTCTCAAGGCAAGAAACCCAACAATGCTAAAGTGATCCAGTTAGTGA ATGCTGCAGAAAAATACACGCTCGCAAACCATCTATTTTGGGGCTTGTGGGGACTTATTTCTAGTTATGTCAATAAAATT GACTTTGATTACAAAGAGTATGCAAGACAGAGGTTTCAACAATACTGGTTGAGGAAGCCTACCTTATTGGACACACAAAG CATCCAACTATGA
Protein sequence (LotjaGi5g1v0287400.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAVKTIELLKGSASIEEIIEVLTTVASDLGDDVVDDLSTLQVIPLKGAMTNEVFQVNWPTKNGDDLRKVLVRLYGDGVEI FFDREEEIRTFECVSEHGQGPRLLGRFTCGRVEEFIHARTLLAADLRDPDISALIASKMREFHNLHMPGAKKVQIWERMR KWLGEAKSLCSPKDATFFGLENLDEEINSLEKKLSEGYQEIGFCHNDLQYGNIMMDEETRSLTIIDYEYASYNPIAYDLA NHFCEMVADYHSDTPHVLDYSKYPGLEERQRFIRIYLSSQGKKPNNAKVIQLVNAAEKYTLANHLFWGLWGLISSYVNKI DFDYKEYARQRFQQYWLRKPTLLDTQSIQL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 347 | 347 | 3.7E-189 | – | |
| PANTHER | 1 | 347 | 347 | 3.7E-189 | – | |
| SUPERFAMILY | 36 | 342 | 307 | 8.31E-94 | ||
| Gene3D | 38 | 115 | 78 | 1.4E-97 | – | |
| CDD | 40 | 338 | 299 | 4.22127E-131 | – | |
| Pfam | 67 | 267 | 201 | 7.9E-71 | – | |
| Gene3D | 75 | 339 | 265 | 1.4E-97 | – | |
| Coils | 180 | 200 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0287400.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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