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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0289800 |
| Transcript ID | LotjaGi5g1v0289800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Early nodulin-like protein 1; TAIR: AT1G21090.1 Cupredoxin superfamily protein; Swiss-Prot: sp|Q9SK27|ENL1_ARATH Early nodulin-like protein 1; TrEMBL-Plants: tr|I3T8U8|I3T8U8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0289800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:60650076..60652664) extracted from Lotus japonicus Gifu genome v1.2.
AAATAATATCAGTCCACCATCCCCAACACCCATGTCTGGCACCCATTCAAACACTTTCTTATCAAAAGCCAAACACCTCT GACAATTTAACAGTCTCCTTCCCCACTCTCTGTCTCTTTCCCCCACACAAAACACAGTTTTCAAAATCCTTTTTTATTTT CAATTTTTGCTATTCCATATTTACCCACAGAAATGGGCCAGACTCCAGAGATAAATACAAATACAGTGCAAAAGCTACAA AGCCTCTTCTAAATTCACTCTTCTCTCTGCTATTTTCCTCACAAAAAAACAAAGCACATTATCATAATGTCCTTCCCCAT CTTCTTCTTCTTTCTTCTACTTTCACTGTTCAAGCTCTCACATTCCACCACAATTGTAGTAGATGGATTTTCTGAGTGGA AGAACCCAACCGTTCACATTGGTGATTCTATCAGTAAGTACTACTAACACACAGGAACAAAAAAAAAACCATTTGGAATC TTCATACTCAATGTTTAACAATAGTAGCTAACATGATTACTCTGCCTCTCCTCTGTTTCAGTTTTCAAGCACAAGCAAAA TCACAGCCTCTACATTTTCAAGAACCAGAATGCCTTCAATATTTGCAATCTCACCCAAGCCACTCTTCTCACCAATCCCA CCACTACCTCCTACACGGTAAGGCTTTTTCAATTTCATCTGGGTGTTTGAAAACAGCTTCAAAATTCTTCCTTTATCTAA CACATGCAAAAACAGGGGAAACAGGGGAAAAGAGTTATTGAACTTTCTAATTTTCTTAACCAATTTTTTGTTCATGTTCC TAGTGGCATCCATCTCGCACTGGTTTCTTCTACTTCACCTTCAACAATGGCTCGCTCAAAACATGCCAAAATTCTCAGAA GCTAGCTATAAAGGTTTCTTCAGCAGCAGCAGCACCACCACAAGGTTCAGAAGTGACTCCAGAACCTTCTCCAGTGGTAA CTACTCCAGCTCCTTCTTCAGGTGGAGATGTGCCATCTTCTCCTTCATTTCCATGGCCTTTCCGTCCTCACCAAGCAGCA GCTTCACCTGGTCCAGCACCAGCAGCAAGTTCACCGGCGGAGACAGTTCCACTGGTACCAGGTAAAGGGGGTAGCACTAG CACTAGCATGCCCTTCATTAACAGCAACCCTGCAGTTCCTCTGCCTACTGGTGAAGTTGATTCTGCTACCATACGCCCCC TCCCAACCTCTGGCCATCAAGGACAGGTGCCCATACCCCTCTCTCACTCTCTCCAAAAAAAAGTATGCACTCAATAGTGT CTATCATTTCTGCATTGGGTCTGCTGTTATGCACTTTTCCTGAGAATGCAGAAACTTTAAATTATACTACATATCACATG TTATGTTGTAGTACCAATTAATGTTGATGCATCTAATAACATGTTAAGAAACTCTTCTGTAGTTACTAGTTAGTTTTAAA GTCTAAATCAATTATGGTTAAAAGTAATTATAGTTAGAAGCTTATATATGAGTACTTATTCTGATAAAAAAACATAAGTG TATGCTAAATGAGTGAATCTATGTTCTCACAATTGATTTTGGTAAAATTGATTATCAGTTAAAGTAAGTTGAAAGTGAAG TTTTTTTATACATTTGTGAAAGACGTGATTTTTGTAAGGTAATATTGTGAAATTCCACAGTTGATTATGTTTAACGCTGA ACCTACTCTCTCTAACTTCTAGCAAAATTGATTTTGAGACTGAAATCAATTTGCCAAAATGATTCTTAAATATCTACTAA GCCAATCGCCACATGCTATTAATGTGCGTGCTTGTCTCAAGAACTTCAATGTGATTTGTTAGCTAGCAAGCACGCACATA AATATAAATGTGTTTGTTTGATGCAATGCTTTAAGAAGTAGTGGGATTTATGGATTACTGATTGAGAGTTGAATTCTATT GTGCGTAACTGCAGGTGATGATTGGGTCATTTGGATTTCATATTGCTGTGTCCACCATGGCTTTACTGCTGCTGTAAGAG GAAGAGAAAGAAAGAACTATGGGGGCCATTTTATGTCACAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAACGGG GCAGGGAGGGTAATCCAATGAGCTAAGCATCATGGAGTGTCTAAAGTAGCTTTAAGAGTGATGATTATACCATGTATTAA GATGCTCTTACATTCTACTGTGGAATATTAAGCACTTTTAGTTTTTTGGATTTGGAAAGCAATTGATTGCTCTGCTTTTG CTTTTTTCCTTTTCCTCTAATTCCCCCCTCCTCTTTGCTTTGGTGCTTTTCATATGGATGTTACATTATTATGAGGTCGC TAACACCATTGCCCCATGATGAGCAGTGCAACAACAAAGCCATATGGTGGGGGATCTCTGAGGTCAGGCCAGTTCTAAAG CACCTCTGCCTCACTGACAGACAAAATTGTTGGTCTAAATTATAATATAAAGCCACTTTGATTTTTCAGGACACCTTGCT TGGTAATGGTCCCTTTGTGCTAATAGTCTCCAAAACTTTATAGGTGAAAAGAGGTTCATTTGTTTAATTAAAATGGTCCT GCAATAGAATAAGATCGAAGATGAATTAC
CDS sequence (LotjaGi5g1v0289800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCCTTCCCCATCTTCTTCTTCTTTCTTCTACTTTCACTGTTCAAGCTCTCACATTCCACCACAATTGTAGTAGATGG ATTTTCTGAGTGGAAGAACCCAACCGTTCACATTGGTGATTCTATCATTTTCAAGCACAAGCAAAATCACAGCCTCTACA TTTTCAAGAACCAGAATGCCTTCAATATTTGCAATCTCACCCAAGCCACTCTTCTCACCAATCCCACCACTACCTCCTAC ACGTGGCATCCATCTCGCACTGGTTTCTTCTACTTCACCTTCAACAATGGCTCGCTCAAAACATGCCAAAATTCTCAGAA GCTAGCTATAAAGGTTTCTTCAGCAGCAGCAGCACCACCACAAGGTTCAGAAGTGACTCCAGAACCTTCTCCAGTGGTAA CTACTCCAGCTCCTTCTTCAGGTGGAGATGTGCCATCTTCTCCTTCATTTCCATGGCCTTTCCGTCCTCACCAAGCAGCA GCTTCACCTGGTCCAGCACCAGCAGCAAGTTCACCGGCGGAGACAGTTCCACTGGTACCAGGTAAAGGGGGTAGCACTAG CACTAGCATGCCCTTCATTAACAGCAACCCTGCAGTTCCTCTGCCTACTGGTGAAGTTGATTCTGCTACCATACGCCCCC TCCCAACCTCTGGCCATCAAGGACAGGTGCCCATACCCCTCTCTCACTCTCTCCAAAAAAAAGTATGCACTCAATAG
Protein sequence (LotjaGi5g1v0289800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSFPIFFFFLLLSLFKLSHSTTIVVDGFSEWKNPTVHIGDSIIFKHKQNHSLYIFKNQNAFNICNLTQATLLTNPTTTSY TWHPSRTGFFYFTFNNGSLKTCQNSQKLAIKVSSAAAAPPQGSEVTPEPSPVVTTPAPSSGGDVPSSPSFPWPFRPHQAA ASPGPAPAASSPAETVPLVPGKGGSTSTSMPFINSNPAVPLPTGEVDSATIRPLPTSGHQGQVPIPLSHSLQKKVCTQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 225 | 225 | 2.1E-93 | – | |
| PANTHER | 1 | 225 | 225 | 2.1E-93 | – | |
| SignalP_GRAM_NEGATIVE | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 20 | 20 | - | – | |
| SignalP_EUK | 1 | 20 | 20 | - | – | |
| Phobius | 1 | 4 | 4 | - | – | |
| Phobius | 5 | 15 | 11 | - | – | |
| Phobius | 16 | 20 | 5 | - | – | |
| Gene3D | 19 | 116 | 98 | 3.1E-11 | ||
| SUPERFAMILY | 20 | 113 | 94 | 1.13E-12 | ||
| Phobius | 21 | 238 | 218 | - | – | |
| MobiDBLite | 117 | 187 | 71 | - | – | |
| MobiDBLite | 127 | 146 | 20 | - | – | |
| MobiDBLite | 199 | 238 | 40 | - | – | |
| MobiDBLite | 213 | 238 | 26 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0289800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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