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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0297000 |
| Transcript ID | LotjaGi5g1v0297000.4 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ferric reductase oxidase; TAIR: AT5G23980.1 ferric reduction oxidase 4; Swiss-Prot: sp|Q8W110|FRO4_ARATH Ferric reduction oxidase 4; TrEMBL-Plants: tr|G7IEN0|G7IEN0_MEDTR Oxidoreductase/ferric-chelate reductase; Found in the gene: LotjaGi5g1v0297000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61388017..61393702) extracted from Lotus japonicus Gifu genome v1.2.
ATGAGGAGCCTGCGCACATTCCTAAGGACCATGTTTCTTTTGGTATTTCTTGGGTGGCTCACCATTTGGATCTTGTTGCC CACAAATATCTACAAGAACACATGGACTCCCAAGCTTCAAAGCAACCTAAATTCCACTTACTTTAGAGAGCAAGGTTCAT CTTCTTGCACTCCATAAGATTATTATGAGAGTTCCTCTTAATTTCCCTTATCTCTATCTCCTCCTTCCTTTTAATAATTA TACTAAATAGTTACAAGGTCAACTATTTTTTAGGGAAAAATCTCCTGCTTTTCACATTCCCCATTATGTTCATTGGGGCT TTGAGTTGCATCTATCTCCATCTTCATCAGAATAGAACACAAAAATCATACACAAGGTAGGTAGCACATATACATGTATA TATGTTTGGATCCAGTTCAAATAACATTTCTTGTAACTTATGCAATGTTTTTTTAAAAGATAAGCGGTAATAAGTGTTAT TTGGTTTATATCCGATCATACCCAGTGAACTAAGATCTTTAATTGTTCTGGTTTCAGGGAAGATGTAAATAGATATCTAT GTTCCTTGAGACGTCCATTGCTAGTGATGTCTCCGATAGGGGTTGTCACATCTATGGAGCTTATTTTTGTAGCCATGTTT GGTGTGCTCTTGATATGGTCCCTCTCCAATTACTTACAAACCAGCTTTTCCCACCTTCATATGCACATGGAAGGAGAAAA AGTGTAAGTATGCTGTATATACTCTAAAGTTTTGTTAAAATTAACGAAAAAGTTACATAAACCGCAACCAGGGGCGGACC CACGTTCAGTTCAGGGGGTTCAGTTGAACCCCCTGGAAAAAAAAAATTCCTACATACCCCCCTATAGTAAATTTTTTTTG AACCCCCTGAAATTAAAAAATTGCACCCAGGTCCCAGACAGCCTCACTCTCTCTCACGCACTCATTCTCACTCTCAGTCT CTCTCTCACCACACTCACGAATCACGATTCTGTCATTCACACGGTCACACCTCTTCTCCTTCTCTTGACCACCACCGATC CAGTCCACCACCACCAGCCGACGCACCACCGCCACCGGCCACCAGCCCACCACAATCCTTCTCTGCTCACTACCTTCTCT CTCTCTCACGACTCTGGTTCTACACTTCTACTTCTCAACTCTCAAGCACAACACACACCAGTGACACCACGCGGCCACGC CACCAGTCCACCACCACCGGCGGCCGGCGCACACTGCACAACGCCACCACCCACTCTCTCTCTCTCTGTTGAAGCTTGAA GGTTGGTTGGAATTGAAAACCCCCAAATTGAAAACCTAAACCCCAAATTGAAAACCCTAACTGCTATTATTTTGATTTGC TTTCCCTTTTCTGAGTTTGAAAGTAGCGTATGTTGTCAATTGTTGAATTTGCTGAAATCAATTTGTCAATTGTTGGCTGG AATATTAGATATTTCTGATTTTTTGATTATTTTCTACTTTTGTTTCGCCTTCTGGGATTTCTGTGATATTGTAAATTAGG TTTGAAGAGGAACACTAATTTTATTTGAAGATTTCTTGCATAGGTTTTGGAGTCAACATGTTCCTTCTTAGAAGGCAAGC CCAGAATCAACAAGAGAATGGTCCTGCGCAACAGGATGCAAAGGTAATCTTCAATTTGTATTTGACATTGTTTCTTGATT CAATTTGCAGCTATGTAGTATAAAATTGATTTGCTTGAAAGTTGCTTTATTGGGTAAAATTTGATGTGGGTATATGAGAA TTGATGAATAAAATGGCTTTAATTATTTATTTATTTATTTAATGGGAGGTGTGTATTCATGTCTGATATGTTGAAAGTGT GTGATTGGTGCTAGGTTCATTTTGTCCCTGATGAACGAGGCTAGCTTATTTCTGCTTCAGAAGATGGTTTGATCTGCACA TTTGATACCACGGGAGATATCAATGATGATGATCATCTAGAGTCAGTAAGTCCAGGACTTCAAATTGAATTGCAATCTGT GTGTAATTCTTGCACCTTGCAACCTTCTTAAATGACCAAAGATATCAAAGAGCTAAGCAATCATATGAAAAATTGTGTTC TTGGTCTCTCTGGTTATATGCTATTGGGTATTTAGGGATTCAGCAGTCTTGCTAGTTGCTACATTTTTAATTCCATTTCA CTTGATGTATCATGCTCTTCATTTTGAATGGATTTCATATCTTCTTTAGCGGTATTTTTTCCTTCTTTGTTTAAATAAAA ATGTTCTTTGTATTTATGTATGTATTGTTTTCATGAAGAAAGTTTCAAAATGGTCTCTTTGAGTTTCTTCTCTTTTTTGT TTCTTTTAGTTACTTTTTATTTTACTTCCGTAGCTATGCAAATTAATGGTGAAATTGATATTACTGATCCTATCTGTTGC TAGGATGCTTATTTATGCAGAGCTCAAGCTTCACATTTTAAAAAATAGAAGGTTTCTTTGTGTCTTTTGTATTTTGAACT GCTGTTTTTTTGGCATGCAAAATCAATAAATTTCTTGTTTACAAAATTGTAGGTGATTAATGTGGGAACTTCCATTGCCA AGGTAGGGCTTTTTGGAGAGAGTTATCAGAAGCTTTGGTGTTTAACGCATATTGAAACCTTGGGGTACAGTTTATTTCGG TTATCTGTTTAGTTCAGGTTACAAAGGTATATGAAAGTCTTTTCCCTTTCGCTGTGTTTGGAATCCTTAAAATCATCATG GAATTGGAATGAATTCTCGTATGAATCTGGTTTTAAATTGTCATGGTTTAAGACTTTAATTCATTTACCAATCATCGTGT TTGTAAATTGTAATATCTCATAATTTGTTACTTTTAATGGATTTGTAAATCATTTTCATTCAACTGAATTCTTTTCATTT TTTAAGCTTTCCCAACATAGGATTTGTGCATTTCGTGTATTTCTCTGTCCAGTTCTTCAGCAGTTCAGTATTTTAATTGA TGTGTTCTTTTGAAAATTTTGAACCCCCTGACCTCGGGGTCCTGGATCCGCCACTGACCGCAACACAACAACTAGTGTCA GACACTACACTTAGCGGCTATTCTTAACTGTCACAAAGTTTAGTGTGATGTATGACAGTGATCAATACTGTGTCGCGCGG TCTATTTGTAAGACCTGTAAAATTAATTAACCTAGCTAACGATTGTATGTACTTTTTGCAGGTGGGAAGCAAAGTTCAGG AGTGTATCTCTGAGACTTGGGTACATAGGAAACATATGTTGGGCGTTTCTTTTTTTTCCAGTCACAAGAGGATCTTCTAT TTTGCCTCTTGTTGGACTCACTTCTGAATCAAGCATCAAGTACCATATCTGGCTTGGTCATACATCAATGGTTCTTTTTG CTGCGCATACTATAGGTTTCATCATCTATTGGGGCATAACAAACCAAATGAAAGAGGTACATATTTTTTAAGGAAAATAA ATATGGTGAGCCACCCAAGAATGAAACAAGACATTTTTAACTATATATGAAAGACATATGCATAATTTTATGACTAACAT TTTTGTGTGATGGCCAAGATGCTAGAATGGAGCAAGACATATGTATCCAATGTAGCAGGGGAGATTGCAAGTTTAATTGC TTTAGCCATGTGGGTGACAAGTTTTCCCCGGGTTAGGCGTAACATGTTTGAGGTGTTCTTCTACACTCACCATCTCTACA TTCTCTACATCTTATTTTATGCCATCCATGTTGGAGTTGCATACATGTGCATGATAGCTCCTGGGATTTTCCTATTCCTC GTTGATAGACACCTCAGATTCTTACAATCTCGCCAACATGCTCGGTTACTATCAGGTCGCCTCTTGCCTTGTGATGCACT TGAGCTCAACTTCTCCAAGACCCCAAGTAAGGGAATCAAAAATTTATTTCTTCCCCAATTTTTCTATTTGAACCTTAGGC TTAATTACATTTTTGGTCCACTTAGTTTTTTTTCCAAGCCAATTGAGTCTTTATACTTTTAAGAATTTAGTCTCTCTCAT TTTTCATAAAATTTGCTAAATCTTCATTTGTTTTTGAATTATTAATGATACAATTTTATGGTTAGATAAGAATTATATGT TTTCAAAAATGTGTTTTATTTTCTATCCTGCCAGTAAAATTTAGACATTTAAAAATCATCATGTAAGTTTGTAACTATAT ATGACAAGATTTTCTGGCTGAGATAAAAAGTTAAGACGCCATTTGAAGACTTGGTAACCCAACTAAGAAAAAGACTTCCA TTACTAGACACTAGTTAATCAGACCCTTTAATATCATAAACCAACTATCCTAATCGTTTAAGCTATGGGTAAAAACACAT AATGATTTTCTATTTTATTTCTGACATTTATATATTTTGTCTAAATCCTAATTTCAGGTTTACACTATAACCCCACGAGC ATAGTGTTCATAAATGTTCCTAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACTTCTAGCTCTAACATGGAGAC AAATTGCCTCAGTGTTGCCATAAAAAATGTTGGTAGCTGGTCAAACAAGCTGTACCAGGAACTTTCTAATTCTTCTTTGG ATCATCTCAACGTTTCTGTTGAAGGGCCATATGGACCGCATACTGCACAATTTTTAAGGTTTGGTGTTCACAACAAACAT GAAATAGGAAAATGCTTCTTGTTTATATATGATACTGTATAAATGAAGAATTCAATTGGGGTCTTTTTTTTTTTAATTAT GCTTTAATTTGCAACTCGTCTCATTAAGCTCATGTAAATATAAATTATCTGTAAGTATTTTTTGAGTTCGACTAATTTTC TCTGCCTGATCAATTTGTCGTCTAACAGGCACGATGAACTAGTGATGGTGAGTGGTGGAAGTGGCATCACACCCTTCATA TCCATAATCCGAGATCTCATATTCCAAAGCCAACAACAAGAATCTCACACTCCAAAACTCCTCCTTGTTTGTGCTTTCAA GCATTATGCTGATCTAACCATGTTAGATCTTGTGCTTCCTGTTTCTGGCTCAACAACTGAAATCTCACAGCTTCAGTTAC AAATTGAAGCCTATATTACAAGAGATAAAGAAGAACCCCCAAGAGATTCTCAAAAACAAATCCAAACCATTTGCTTTAAG CCCTCCTTCTCAGACTCTCCAATCTCAGCTGTATTAGGCCCCAACAACTGGTTATGGCTTGGTGCTATAATCTCATCATC ATTCCTCATGTTCCTCCTCCTTTTAGGGATTGTCACTCGTTTTTATATTTACCCAATTGAAAATAACTCAGATGAAGTTT ATGACTGGAGCTTCAAGGTTTTGTGGTTCCTGTTTCTACTCTGTGCATGCATATGTATCTGTTCTAGTGCAATTTTTCTA TGGTGGAAGAAACAAAACGTTGTTGAAATTAATAAGCAGATTATGAATGTAGAACTTTTTACACCAGAAAGATCACCAGG TTCATGGATTTATGGCTCGGAAAGAGAGCTGGAAAGCCTTCCTCATCAATCTTTAGTGCAAGCCACCAATGTGCATTTTG GTGCAAGGCCTGATCTCAAGAGTAAGTGGCAAGTTTTTTATTGTCAACCCGTAATGATACGTACTTGGATTGCTGGAACC TGCATTTACTGAAGTCATGGATCCATGACCTTTTGATCTTACTAAGACGACTCTTATTCAAATAGTTTGATCCTAAGTGC ACATAA
CDS sequence (LotjaGi5g1v0297000.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTCTCCGATAGGGGTTGTCACATCTATGGAGCTTATTTTTGTAGCCATGTTTGGTGTGCTCTTGATATGGTCCCTCTC CAATTACTTACAAACCAGCTTTTCCCACCTTCATATGCACATGGAAGGAGAAAAAGTGTGGGAAGCAAAGTTCAGGAGTG TATCTCTGAGACTTGGGTACATAGGAAACATATGTTGGGCGTTTCTTTTTTTTCCAGTCACAAGAGGATCTTCTATTTTG CCTCTTGTTGGACTCACTTCTGAATCAAGCATCAAGTACCATATCTGGCTTGGTCATACATCAATGGTTCTTTTTGCTGC GCATACTATAGGTTTCATCATCTATTGGGGCATAACAAACCAAATGAAAGAGATGCTAGAATGGAGCAAGACATATGTAT CCAATGTAGCAGGGGAGATTGCAAGTTTAATTGCTTTAGCCATGTGGGTGACAAGTTTTCCCCGGGTTAGGCGTAACATG TTTGAGGTGTTCTTCTACACTCACCATCTCTACATTCTCTACATCTTATTTTATGCCATCCATGTTGGAGTTGCATACAT GTGCATGATAGCTCCTGGGATTTTCCTATTCCTCGTTGATAGACACCTCAGATTCTTACAATCTCGCCAACATGCTCGGT TACTATCAGGTCGCCTCTTGCCTTGTGATGCACTTGAGCTCAACTTCTCCAAGACCCCAAGTTTACACTATAACCCCACG AGCATAGTGTTCATAAATGTTCCTAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACTTCTAGCTCTAACATGGA GACAAATTGCCTCAGTGTTGCCATAAAAAATGTTGGTAGCTGGTCAAACAAGCTGTACCAGGAACTTTCTAATTCTTCTT TGGATCATCTCAACGTTTCTGTTGAAGGGCCATATGGACCGCATACTGCACAATTTTTAAGGCACGATGAACTAGTGATG GTGAGTGGTGGAAGTGGCATCACACCCTTCATATCCATAATCCGAGATCTCATATTCCAAAGCCAACAACAAGAATCTCA CACTCCAAAACTCCTCCTTGTTTGTGCTTTCAAGCATTATGCTGATCTAACCATGTTAGATCTTGTGCTTCCTGTTTCTG GCTCAACAACTGAAATCTCACAGCTTCAGTTACAAATTGAAGCCTATATTACAAGAGATAAAGAAGAACCCCCAAGAGAT TCTCAAAAACAAATCCAAACCATTTGCTTTAAGCCCTCCTTCTCAGACTCTCCAATCTCAGCTGTATTAGGCCCCAACAA CTGGTTATGGCTTGGTGCTATAATCTCATCATCATTCCTCATGTTCCTCCTCCTTTTAGGGATTGTCACTCGTTTTTATA TTTACCCAATTGAAAATAACTCAGATGAAGTTTATGACTGGAGCTTCAAGGTTTTGTGGTTCCTGTTTCTACTCTGTGCA TGCATATGTATCTGTTCTAGTGCAATTTTTCTATGGTGGAAGAAACAAAACGTTGTTGAAATTAATAAGCAGATTATGAA TGTAGAACTTTTTACACCAGAAAGATCACCAGGTTCATGGATTTATGGCTCGGAAAGAGAGCTGGAAAGCCTTCCTCATC AATCTTTAGTGCAAGCCACCAATGTGCATTTTGGTGCAAGGCCTGATCTCAAGAGTAAGTGGCAAGTTTTTTATTGTCAA CCCGTAATGATACGTACTTGGATTGCTGGAACCTGCATTTACTGA
Protein sequence (LotjaGi5g1v0297000.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSPIGVVTSMELIFVAMFGVLLIWSLSNYLQTSFSHLHMHMEGEKVWEAKFRSVSLRLGYIGNICWAFLFFPVTRGSSIL PLVGLTSESSIKYHIWLGHTSMVLFAAHTIGFIIYWGITNQMKEMLEWSKTYVSNVAGEIASLIALAMWVTSFPRVRRNM FEVFFYTHHLYILYILFYAIHVGVAYMCMIAPGIFLFLVDRHLRFLQSRQHARLLSGRLLPCDALELNFSKTPSLHYNPT SIVFINVPKVSKLQWHPFTVTSSSNMETNCLSVAIKNVGSWSNKLYQELSNSSLDHLNVSVEGPYGPHTAQFLRHDELVM VSGGSGITPFISIIRDLIFQSQQQESHTPKLLLVCAFKHYADLTMLDLVLPVSGSTTEISQLQLQIEAYITRDKEEPPRD SQKQIQTICFKPSFSDSPISAVLGPNNWLWLGAIISSSFLMFLLLLGIVTRFYIYPIENNSDEVYDWSFKVLWFLFLLCA CICICSSAIFLWWKKQNVVEINKQIMNVELFTPERSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLKSKWQVFYCQ PVMIRTWIAGTCIY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 553 | 553 | 3.0E-266 | – | |
| Phobius | 1 | 11 | 11 | - | – | |
| PANTHER | 1 | 553 | 553 | 3.0E-266 | – | |
| SFLD | 4 | 557 | 554 | 0.0 | – | |
| SFLD | 4 | 557 | 554 | 0.0 | – | |
| TMHMM | 4 | 26 | 23 | - | – | |
| Phobius | 12 | 30 | 19 | - | – | |
| Phobius | 31 | 50 | 20 | - | – | |
| Phobius | 51 | 73 | 23 | - | – | |
| TMHMM | 54 | 76 | 23 | - | – | |
| Pfam | 59 | 177 | 119 | 9.3E-17 | ||
| Phobius | 74 | 92 | 19 | - | – | |
| Phobius | 93 | 119 | 27 | - | – | |
| TMHMM | 96 | 118 | 23 | - | – | |
| Phobius | 120 | 130 | 11 | - | – | |
| TMHMM | 131 | 153 | 23 | - | – | |
| Phobius | 131 | 151 | 21 | - | – | |
| PRINTS | 136 | 159 | 24 | 1.6E-7 | ||
| Phobius | 152 | 170 | 19 | - | – | |
| PRINTS | 161 | 181 | 21 | 1.6E-7 | ||
| TMHMM | 168 | 199 | 32 | - | – | |
| Phobius | 171 | 199 | 29 | - | – | |
| Phobius | 200 | 427 | 228 | - | – | |
| ProSiteProfiles | 207 | 311 | 105 | 12.035 | ||
| Pfam | 217 | 308 | 92 | 4.0E-20 | ||
| CDD | 218 | 392 | 175 | 2.29637E-34 | – | |
| Gene3D | 299 | 425 | 127 | 8.4E-17 | ||
| SUPERFAMILY | 299 | 369 | 71 | 6.29E-12 | ||
| Pfam | 315 | 553 | 239 | 3.4E-22 | ||
| Phobius | 428 | 453 | 26 | - | – | |
| TMHMM | 429 | 451 | 23 | - | – | |
| Phobius | 454 | 472 | 19 | - | – | |
| TMHMM | 471 | 493 | 23 | - | – | |
| Phobius | 473 | 493 | 21 | - | – | |
| Phobius | 494 | 574 | 81 | - | – | |
| PRINTS | 513 | 531 | 19 | 1.6E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0297000.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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