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LotjaGi5g1v0297000.5

Overview

Field Value
Gene ID LotjaGi5g1v0297000
Transcript ID LotjaGi5g1v0297000.5
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Ferric reductase oxidase; TAIR: AT5G23990.2 ferric reduction oxidase 5; Swiss-Prot: sp|Q9FLW2|FRO5_ARATH Ferric reduction oxidase 5; TrEMBL-Plants: tr|G7IEN0|G7IEN0_MEDTR Oxidoreductase/ferric-chelate reductase; Found in the gene: LotjaGi5g1v0297000
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:61390453..61394406) extracted from Lotus japonicus Gifu genome v1.2.

TTTAAAAAATAGAAGGTTTCTTTGTGTCTTTTGTATTTTGAACTGCTGTTTTTTTGGCATGCAAAATCAATAAATTTCTT GTTTACAAAATTGTAGGTGATTAATGTGGGAACTTCCATTGCCAAGGTAGGGCTTTTTGGAGAGAGTTATCAGAAGCTTT GGTGTTTAACGCATATTGAAACCTTGGGGTACAGTTTATTTCGGTTATCTGTTTAGTTCAGGTTACAAAGGTATATGAAA GTCTTTTCCCTTTCGCTGTGTTTGGAATCCTTAAAATCATCATGGAATTGGAATGAATTCTCGTATGAATCTGGTTTTAA ATTGTCATGGTTTAAGACTTTAATTCATTTACCAATCATCGTGTTTGTAAATTGTAATATCTCATAATTTGTTACTTTTA ATGGATTTGTAAATCATTTTCATTCAACTGAATTCTTTTCATTTTTTAAGCTTTCCCAACATAGGATTTGTGCATTTCGT GTATTTCTCTGTCCAGTTCTTCAGCAGTTCAGTATTTTAATTGATGTGTTCTTTTGAAAATTTTGAACCCCCTGACCTCG GGGTCCTGGATCCGCCACTGACCGCAACACAACAACTAGTGTCAGACACTACACTTAGCGGCTATTCTTAACTGTCACAA AGTTTAGTGTGATGTATGACAGTGATCAATACTGTGTCGCGCGGTCTATTTGTAAGACCTGTAAAATTAATTAACCTAGC TAACGATTGTATGTACTTTTTGCAGGTGGGAAGCAAAGTTCAGGAGTGTATCTCTGAGACTTGGGTACATAGGAAACATA TGTTGGGCGTTTCTTTTTTTTCCAGTCACAAGAGGATCTTCTATTTTGCCTCTTGTTGGACTCACTTCTGAATCAAGCAT CAAGTACCATATCTGGCTTGGTCATACATCAATGGTTCTTTTTGCTGCGCATACTATAGGTTTCATCATCTATTGGGGCA TAACAAACCAAATGAAAGAGGTACATATTTTTTAAGGAAAATAAATATGGTGAGCCACCCAAGAATGAAACAAGACATTT TTAACTATATATGAAAGACATATGCATAATTTTATGACTAACATTTTTGTGTGATGGCCAAGATGCTAGAATGGAGCAAG ACATATGTATCCAATGTAGCAGGGGAGATTGCAAGTTTAATTGCTTTAGCCATGTGGGTGACAAGTTTTCCCCGGGTTAG GCGTAACATGTTTGAGGTGTTCTTCTACACTCACCATCTCTACATTCTCTACATCTTATTTTATGCCATCCATGTTGGAG TTGCATACATGTGCATGATAGCTCCTGGGATTTTCCTATTCCTCGTTGATAGACACCTCAGATTCTTACAATCTCGCCAA CATGCTCGGTTACTATCAGGTCGCCTCTTGCCTTGTGATGCACTTGAGCTCAACTTCTCCAAGACCCCAAGTAAGGGAAT CAAAAATTTATTTCTTCCCCAATTTTTCTATTTGAACCTTAGGCTTAATTACATTTTTGGTCCACTTAGTTTTTTTTCCA AGCCAATTGAGTCTTTATACTTTTAAGAATTTAGTCTCTCTCATTTTTCATAAAATTTGCTAAATCTTCATTTGTTTTTG AATTATTAATGATACAATTTTATGGTTAGATAAGAATTATATGTTTTCAAAAATGTGTTTTATTTTCTATCCTGCCAGTA AAATTTAGACATTTAAAAATCATCATGTAAGTTTGTAACTATATATGACAAGATTTTCTGGCTGAGATAAAAAGTTAAGA CGCCATTTGAAGACTTGGTAACCCAACTAAGAAAAAGACTTCCATTACTAGACACTAGTTAATCAGACCCTTTAATATCA TAAACCAACTATCCTAATCGTTTAAGCTATGGGTAAAAACACATAATGATTTTCTATTTTATTTCTGACATTTATATATT TTGTCTAAATCCTAATTTCAGGTTTACACTATAACCCCACGAGCATAGTGTTCATAAATGTTCCTAAGGTTTCCAAGCTG CAATGGCACCCTTTTACAGTGACTTCTAGCTCTAACATGGAGACAAATTGCCTCAGTGTTGCCATAAAAAATGTTGGTAG CTGGTCAAACAAGCTGTACCAGGAACTTTCTAATTCTTCTTTGGATCATCTCAACGTTTCTGTTGAAGGGCCATATGGAC CGCATACTGCACAATTTTTAAGGTTTGGTGTTCACAACAAACATGAAATAGGAAAATGCTTCTTGTTTATATATGATACT GTATAAATGAAGAATTCAATTGGGGTCTTTTTTTTTTTAATTATGCTTTAATTTGCAACTCGTCTCATTAAGCTCATGTA AATATAAATTATCTGTAAGTATTTTTTGAGTTCGACTAATTTTCTCTGCCTGATCAATTTGTCGTCTAACAGGCACGATG AACTAGTGATGGTGAGTGGTGGAAGTGGCATCACACCCTTCATATCCATAATCCGAGATCTCATATTCCAAAGCCAACAA CAAGAATCTCACACTCCAAAACTCCTCCTTGTTTGTGCTTTCAAGCATTATGCTGATCTAACCATGTTAGATCTTGTGCT TCCTGTTTCTGGCTCAACAACTGAAATCTCACAGCTTCAGTTACAAATTGAAGCCTATATTACAAGAGATAAAGAAGAAC CCCCAAGAGATTCTCAAAAACAAATCCAAACCATTTGCTTTAAGCCCTCCTTCTCAGACTCTCCAATCTCAGCTGTATTA GGCCCCAACAACTGGTTATGGCTTGGTGCTATAATCTCATCATCATTCCTCATGTTCCTCCTCCTTTTAGGGATTGTCAC TCGTTTTTATATTTACCCAATTGAAAATAACTCAGATGAAGTTTATGACTGGAGCTTCAAGGTTTTGTGGTTCCTGTTTC TACTCTGTGCATGCATATGTATCTGTTCTAGTGCAATTTTTCTATGGTGGAAGAAACAAAACGTTGTTGAAATTAATAAG CAGATTATGAATGTAGAACTTTTTACACCAGAAAGATCACCAGGTTCATGGATTTATGGCTCGGAAAGAGAGCTGGAAAG CCTTCCTCATCAATCTTTAGTGCAAGCCACCAATGTGCATTTTGGTGCAAGGCCTGATCTCAAGAGTAAGTGGCAAGTTT TTTATTGTCAACCCGTAATGATACGTACTTGGATTGCTGGAACCTGCATTTACTGAAGTCATGGATCCATGACCTTTTGA TCTTACTAAGACGACTCTTATTCAAATAGTTTGATCCTAAGTGCACATAAAAGTCTTAAAATCGGAGCCATCCCATTTAG ATCGGACGGTCACGAACCCCTGACTTTAGTGAATGTAGAATCTCTTGGCTGAATCTAATCTGAATTCGCAATGCACTTAG TTGACTGAATAAAAAGTTTATGTTTTCATACTTTCTAACGGTAAACCAAACTGACACTTAGACATTCAAACAGTGTAAAC ACTTTATAGACACTCAATTTTTCTCTTCTTATCACATTCATTTTATATCACATCAATTCTCTTTAATCTCTTCATTTCTC ACTCTAAATGTGTATGTTCGGTATTTGCATTATGCAGATATTAATAGTAAAGTGACTATATTTGTATTTACTATTATAGG ATAATGATACAAATTGTCAATGTTACAGAAATTCTGTTTGAGCGCAAAGGAAAAGATGTTGGAGTCCTTGTTTGTGGCCC TAGAAACCTGAGACATGAAGTTGCCAGAATTTGTTCTTCGGGTTTGGCTGATAATCTTCACTTTGAATCCATCAGCTTCA ATTGGTGATGTATATACTTTGTCTGCCCTTAGTTTGGTTTTTGGCGGTTTGGGTTCTCTTTTTTTTTCAATCAGTTTGGA TTGTCTTTAGTTGCCGTAATGTTCTATGGGCCTTGGATATATTGGTTTGGTTTTCTGATGTTGCCTACAATGGGTGGGTA CTTTTCAAAGTACACTCACCCCCCTCAAGTTTTG 

CDS sequence (LotjaGi5g1v0297000.5) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGTTCTTTTTGCTGCGCATACTATAGGTTTCATCATCTATTGGGGCATAACAAACCAAATGAAAGAGATGCTAGAATG GAGCAAGACATATGTATCCAATGTAGCAGGGGAGATTGCAAGTTTAATTGCTTTAGCCATGTGGGTGACAAGTTTTCCCC GGGTTAGGCGTAACATGTTTGAGGTGTTCTTCTACACTCACCATCTCTACATTCTCTACATCTTATTTTATGCCATCCAT GTTGGAGTTGCATACATGTGCATGATAGCTCCTGGGATTTTCCTATTCCTCGTTGATAGACACCTCAGATTCTTACAATC TCGCCAACATGCTCGGTTACTATCAGGTCGCCTCTTGCCTTGTGATGCACTTGAGCTCAACTTCTCCAAGACCCCAAGTT TACACTATAACCCCACGAGCATAGTGTTCATAAATGTTCCTAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACT TCTAGCTCTAACATGGAGACAAATTGCCTCAGTGTTGCCATAAAAAATGTTGGTAGCTGGTCAAACAAGCTGTACCAGGA ACTTTCTAATTCTTCTTTGGATCATCTCAACGTTTCTGTTGAAGGGCCATATGGACCGCATACTGCACAATTTTTAAGGC ACGATGAACTAGTGATGGTGAGTGGTGGAAGTGGCATCACACCCTTCATATCCATAATCCGAGATCTCATATTCCAAAGC CAACAACAAGAATCTCACACTCCAAAACTCCTCCTTGTTTGTGCTTTCAAGCATTATGCTGATCTAACCATGTTAGATCT TGTGCTTCCTGTTTCTGGCTCAACAACTGAAATCTCACAGCTTCAGTTACAAATTGAAGCCTATATTACAAGAGATAAAG AAGAACCCCCAAGAGATTCTCAAAAACAAATCCAAACCATTTGCTTTAAGCCCTCCTTCTCAGACTCTCCAATCTCAGCT GTATTAGGCCCCAACAACTGGTTATGGCTTGGTGCTATAATCTCATCATCATTCCTCATGTTCCTCCTCCTTTTAGGGAT TGTCACTCGTTTTTATATTTACCCAATTGAAAATAACTCAGATGAAGTTTATGACTGGAGCTTCAAGGTTTTGTGGTTCC TGTTTCTACTCTGTGCATGCATATGTATCTGTTCTAGTGCAATTTTTCTATGGTGGAAGAAACAAAACGTTGTTGAAATT AATAAGCAGATTATGAATGTAGAACTTTTTACACCAGAAAGATCACCAGGTTCATGGATTTATGGCTCGGAAAGAGAGCT GGAAAGCCTTCCTCATCAATCTTTAGTGCAAGCCACCAATGTGCATTTTGGTGCAAGGCCTGATCTCAAGAAAATTCTGT TTGAGCGCAAAGGAAAAGATGTTGGAGTCCTTGTTTGTGGCCCTAGAAACCTGAGACATGAAGTTGCCAGAATTTGTTCT TCGGGTTTGGCTGATAATCTTCACTTTGAATCCATCAGCTTCAATTGGTGA 

Protein sequence (LotjaGi5g1v0297000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.

MVLFAAHTIGFIIYWGITNQMKEMLEWSKTYVSNVAGEIASLIALAMWVTSFPRVRRNMFEVFFYTHHLYILYILFYAIH VGVAYMCMIAPGIFLFLVDRHLRFLQSRQHARLLSGRLLPCDALELNFSKTPSLHYNPTSIVFINVPKVSKLQWHPFTVT SSSNMETNCLSVAIKNVGSWSNKLYQELSNSSLDHLNVSVEGPYGPHTAQFLRHDELVMVSGGSGITPFISIIRDLIFQS QQQESHTPKLLLVCAFKHYADLTMLDLVLPVSGSTTEISQLQLQIEAYITRDKEEPPRDSQKQIQTICFKPSFSDSPISA VLGPNNWLWLGAIISSSFLMFLLLLGIVTRFYIYPIENNSDEVYDWSFKVLWFLFLLCACICICSSAIFLWWKKQNVVEI NKQIMNVELFTPERSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLKKILFERKGKDVGVLVCGPRNLRHEVARICS SGLADNLHFESISFNW 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER 1 495 495 3.0E-227
SFLD 1 496 496 0.0
SFLD 1 496 496 0.0
Phobius 1 30 30 -
PANTHER 1 495 495 3.0E-227
Pfam 2 76 75 6.0E-9
TMHMM 4 18 15 -
TMHMM 30 52 23 -
Phobius 31 50 20 -
PRINTS 35 58 24 1.1E-7
Phobius 51 69 19 -
PRINTS 60 80 21 1.1E-7
TMHMM 67 98 32 -
Phobius 70 98 29 -
Phobius 99 326 228 -
ProSiteProfiles 106 210 105 12.035
SUPERFAMILY 106 188 83 9.83E-5
Pfam 116 207 92 3.1E-20
CDD 117 291 175 2.5936E-35
SUPERFAMILY 198 268 71 4.85E-12
Gene3D 198 324 127 6.6E-17
Pfam 214 480 267 2.0E-31
Phobius 327 352 26 -
TMHMM 328 350 23 -
Phobius 353 371 19 -
TMHMM 370 392 23 -
Phobius 372 392 21 -
Phobius 393 496 104 -
Gene3D 393 494 102 1.1E-5
PRINTS 412 430 19 1.1E-7

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
Cellular component Membrane A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it.
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Biological process Oxidation-reduction process A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons.

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0297000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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