Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0297000 |
Transcript ID | LotjaGi5g1v0297000.5 |
Related isoforms 4 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Ferric reductase oxidase; TAIR: AT5G23990.2 ferric reduction oxidase 5; Swiss-Prot: sp|Q9FLW2|FRO5_ARATH Ferric reduction oxidase 5; TrEMBL-Plants: tr|G7IEN0|G7IEN0_MEDTR Oxidoreductase/ferric-chelate reductase; Found in the gene: LotjaGi5g1v0297000 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61390453..61394406) extracted from Lotus japonicus Gifu genome v1.2.
TTTAAAAAATAGAAGGTTTCTTTGTGTCTTTTGTATTTTGAACTGCTGTTTTTTTGGCATGCAAAATCAATAAATTTCTT GTTTACAAAATTGTAGGTGATTAATGTGGGAACTTCCATTGCCAAGGTAGGGCTTTTTGGAGAGAGTTATCAGAAGCTTT GGTGTTTAACGCATATTGAAACCTTGGGGTACAGTTTATTTCGGTTATCTGTTTAGTTCAGGTTACAAAGGTATATGAAA GTCTTTTCCCTTTCGCTGTGTTTGGAATCCTTAAAATCATCATGGAATTGGAATGAATTCTCGTATGAATCTGGTTTTAA ATTGTCATGGTTTAAGACTTTAATTCATTTACCAATCATCGTGTTTGTAAATTGTAATATCTCATAATTTGTTACTTTTA ATGGATTTGTAAATCATTTTCATTCAACTGAATTCTTTTCATTTTTTAAGCTTTCCCAACATAGGATTTGTGCATTTCGT GTATTTCTCTGTCCAGTTCTTCAGCAGTTCAGTATTTTAATTGATGTGTTCTTTTGAAAATTTTGAACCCCCTGACCTCG GGGTCCTGGATCCGCCACTGACCGCAACACAACAACTAGTGTCAGACACTACACTTAGCGGCTATTCTTAACTGTCACAA AGTTTAGTGTGATGTATGACAGTGATCAATACTGTGTCGCGCGGTCTATTTGTAAGACCTGTAAAATTAATTAACCTAGC TAACGATTGTATGTACTTTTTGCAGGTGGGAAGCAAAGTTCAGGAGTGTATCTCTGAGACTTGGGTACATAGGAAACATA TGTTGGGCGTTTCTTTTTTTTCCAGTCACAAGAGGATCTTCTATTTTGCCTCTTGTTGGACTCACTTCTGAATCAAGCAT CAAGTACCATATCTGGCTTGGTCATACATCAATGGTTCTTTTTGCTGCGCATACTATAGGTTTCATCATCTATTGGGGCA TAACAAACCAAATGAAAGAGGTACATATTTTTTAAGGAAAATAAATATGGTGAGCCACCCAAGAATGAAACAAGACATTT TTAACTATATATGAAAGACATATGCATAATTTTATGACTAACATTTTTGTGTGATGGCCAAGATGCTAGAATGGAGCAAG ACATATGTATCCAATGTAGCAGGGGAGATTGCAAGTTTAATTGCTTTAGCCATGTGGGTGACAAGTTTTCCCCGGGTTAG GCGTAACATGTTTGAGGTGTTCTTCTACACTCACCATCTCTACATTCTCTACATCTTATTTTATGCCATCCATGTTGGAG TTGCATACATGTGCATGATAGCTCCTGGGATTTTCCTATTCCTCGTTGATAGACACCTCAGATTCTTACAATCTCGCCAA CATGCTCGGTTACTATCAGGTCGCCTCTTGCCTTGTGATGCACTTGAGCTCAACTTCTCCAAGACCCCAAGTAAGGGAAT CAAAAATTTATTTCTTCCCCAATTTTTCTATTTGAACCTTAGGCTTAATTACATTTTTGGTCCACTTAGTTTTTTTTCCA AGCCAATTGAGTCTTTATACTTTTAAGAATTTAGTCTCTCTCATTTTTCATAAAATTTGCTAAATCTTCATTTGTTTTTG AATTATTAATGATACAATTTTATGGTTAGATAAGAATTATATGTTTTCAAAAATGTGTTTTATTTTCTATCCTGCCAGTA AAATTTAGACATTTAAAAATCATCATGTAAGTTTGTAACTATATATGACAAGATTTTCTGGCTGAGATAAAAAGTTAAGA CGCCATTTGAAGACTTGGTAACCCAACTAAGAAAAAGACTTCCATTACTAGACACTAGTTAATCAGACCCTTTAATATCA TAAACCAACTATCCTAATCGTTTAAGCTATGGGTAAAAACACATAATGATTTTCTATTTTATTTCTGACATTTATATATT TTGTCTAAATCCTAATTTCAGGTTTACACTATAACCCCACGAGCATAGTGTTCATAAATGTTCCTAAGGTTTCCAAGCTG CAATGGCACCCTTTTACAGTGACTTCTAGCTCTAACATGGAGACAAATTGCCTCAGTGTTGCCATAAAAAATGTTGGTAG CTGGTCAAACAAGCTGTACCAGGAACTTTCTAATTCTTCTTTGGATCATCTCAACGTTTCTGTTGAAGGGCCATATGGAC CGCATACTGCACAATTTTTAAGGTTTGGTGTTCACAACAAACATGAAATAGGAAAATGCTTCTTGTTTATATATGATACT GTATAAATGAAGAATTCAATTGGGGTCTTTTTTTTTTTAATTATGCTTTAATTTGCAACTCGTCTCATTAAGCTCATGTA AATATAAATTATCTGTAAGTATTTTTTGAGTTCGACTAATTTTCTCTGCCTGATCAATTTGTCGTCTAACAGGCACGATG AACTAGTGATGGTGAGTGGTGGAAGTGGCATCACACCCTTCATATCCATAATCCGAGATCTCATATTCCAAAGCCAACAA CAAGAATCTCACACTCCAAAACTCCTCCTTGTTTGTGCTTTCAAGCATTATGCTGATCTAACCATGTTAGATCTTGTGCT TCCTGTTTCTGGCTCAACAACTGAAATCTCACAGCTTCAGTTACAAATTGAAGCCTATATTACAAGAGATAAAGAAGAAC CCCCAAGAGATTCTCAAAAACAAATCCAAACCATTTGCTTTAAGCCCTCCTTCTCAGACTCTCCAATCTCAGCTGTATTA GGCCCCAACAACTGGTTATGGCTTGGTGCTATAATCTCATCATCATTCCTCATGTTCCTCCTCCTTTTAGGGATTGTCAC TCGTTTTTATATTTACCCAATTGAAAATAACTCAGATGAAGTTTATGACTGGAGCTTCAAGGTTTTGTGGTTCCTGTTTC TACTCTGTGCATGCATATGTATCTGTTCTAGTGCAATTTTTCTATGGTGGAAGAAACAAAACGTTGTTGAAATTAATAAG CAGATTATGAATGTAGAACTTTTTACACCAGAAAGATCACCAGGTTCATGGATTTATGGCTCGGAAAGAGAGCTGGAAAG CCTTCCTCATCAATCTTTAGTGCAAGCCACCAATGTGCATTTTGGTGCAAGGCCTGATCTCAAGAGTAAGTGGCAAGTTT TTTATTGTCAACCCGTAATGATACGTACTTGGATTGCTGGAACCTGCATTTACTGAAGTCATGGATCCATGACCTTTTGA TCTTACTAAGACGACTCTTATTCAAATAGTTTGATCCTAAGTGCACATAAAAGTCTTAAAATCGGAGCCATCCCATTTAG ATCGGACGGTCACGAACCCCTGACTTTAGTGAATGTAGAATCTCTTGGCTGAATCTAATCTGAATTCGCAATGCACTTAG TTGACTGAATAAAAAGTTTATGTTTTCATACTTTCTAACGGTAAACCAAACTGACACTTAGACATTCAAACAGTGTAAAC ACTTTATAGACACTCAATTTTTCTCTTCTTATCACATTCATTTTATATCACATCAATTCTCTTTAATCTCTTCATTTCTC ACTCTAAATGTGTATGTTCGGTATTTGCATTATGCAGATATTAATAGTAAAGTGACTATATTTGTATTTACTATTATAGG ATAATGATACAAATTGTCAATGTTACAGAAATTCTGTTTGAGCGCAAAGGAAAAGATGTTGGAGTCCTTGTTTGTGGCCC TAGAAACCTGAGACATGAAGTTGCCAGAATTTGTTCTTCGGGTTTGGCTGATAATCTTCACTTTGAATCCATCAGCTTCA ATTGGTGATGTATATACTTTGTCTGCCCTTAGTTTGGTTTTTGGCGGTTTGGGTTCTCTTTTTTTTTCAATCAGTTTGGA TTGTCTTTAGTTGCCGTAATGTTCTATGGGCCTTGGATATATTGGTTTGGTTTTCTGATGTTGCCTACAATGGGTGGGTA CTTTTCAAAGTACACTCACCCCCCTCAAGTTTTG
CDS sequence (LotjaGi5g1v0297000.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTTCTTTTTGCTGCGCATACTATAGGTTTCATCATCTATTGGGGCATAACAAACCAAATGAAAGAGATGCTAGAATG GAGCAAGACATATGTATCCAATGTAGCAGGGGAGATTGCAAGTTTAATTGCTTTAGCCATGTGGGTGACAAGTTTTCCCC GGGTTAGGCGTAACATGTTTGAGGTGTTCTTCTACACTCACCATCTCTACATTCTCTACATCTTATTTTATGCCATCCAT GTTGGAGTTGCATACATGTGCATGATAGCTCCTGGGATTTTCCTATTCCTCGTTGATAGACACCTCAGATTCTTACAATC TCGCCAACATGCTCGGTTACTATCAGGTCGCCTCTTGCCTTGTGATGCACTTGAGCTCAACTTCTCCAAGACCCCAAGTT TACACTATAACCCCACGAGCATAGTGTTCATAAATGTTCCTAAGGTTTCCAAGCTGCAATGGCACCCTTTTACAGTGACT TCTAGCTCTAACATGGAGACAAATTGCCTCAGTGTTGCCATAAAAAATGTTGGTAGCTGGTCAAACAAGCTGTACCAGGA ACTTTCTAATTCTTCTTTGGATCATCTCAACGTTTCTGTTGAAGGGCCATATGGACCGCATACTGCACAATTTTTAAGGC ACGATGAACTAGTGATGGTGAGTGGTGGAAGTGGCATCACACCCTTCATATCCATAATCCGAGATCTCATATTCCAAAGC CAACAACAAGAATCTCACACTCCAAAACTCCTCCTTGTTTGTGCTTTCAAGCATTATGCTGATCTAACCATGTTAGATCT TGTGCTTCCTGTTTCTGGCTCAACAACTGAAATCTCACAGCTTCAGTTACAAATTGAAGCCTATATTACAAGAGATAAAG AAGAACCCCCAAGAGATTCTCAAAAACAAATCCAAACCATTTGCTTTAAGCCCTCCTTCTCAGACTCTCCAATCTCAGCT GTATTAGGCCCCAACAACTGGTTATGGCTTGGTGCTATAATCTCATCATCATTCCTCATGTTCCTCCTCCTTTTAGGGAT TGTCACTCGTTTTTATATTTACCCAATTGAAAATAACTCAGATGAAGTTTATGACTGGAGCTTCAAGGTTTTGTGGTTCC TGTTTCTACTCTGTGCATGCATATGTATCTGTTCTAGTGCAATTTTTCTATGGTGGAAGAAACAAAACGTTGTTGAAATT AATAAGCAGATTATGAATGTAGAACTTTTTACACCAGAAAGATCACCAGGTTCATGGATTTATGGCTCGGAAAGAGAGCT GGAAAGCCTTCCTCATCAATCTTTAGTGCAAGCCACCAATGTGCATTTTGGTGCAAGGCCTGATCTCAAGAAAATTCTGT TTGAGCGCAAAGGAAAAGATGTTGGAGTCCTTGTTTGTGGCCCTAGAAACCTGAGACATGAAGTTGCCAGAATTTGTTCT TCGGGTTTGGCTGATAATCTTCACTTTGAATCCATCAGCTTCAATTGGTGA
Protein sequence (LotjaGi5g1v0297000.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLFAAHTIGFIIYWGITNQMKEMLEWSKTYVSNVAGEIASLIALAMWVTSFPRVRRNMFEVFFYTHHLYILYILFYAIH VGVAYMCMIAPGIFLFLVDRHLRFLQSRQHARLLSGRLLPCDALELNFSKTPSLHYNPTSIVFINVPKVSKLQWHPFTVT SSSNMETNCLSVAIKNVGSWSNKLYQELSNSSLDHLNVSVEGPYGPHTAQFLRHDELVMVSGGSGITPFISIIRDLIFQS QQQESHTPKLLLVCAFKHYADLTMLDLVLPVSGSTTEISQLQLQIEAYITRDKEEPPRDSQKQIQTICFKPSFSDSPISA VLGPNNWLWLGAIISSSFLMFLLLLGIVTRFYIYPIENNSDEVYDWSFKVLWFLFLLCACICICSSAIFLWWKKQNVVEI NKQIMNVELFTPERSPGSWIYGSERELESLPHQSLVQATNVHFGARPDLKKILFERKGKDVGVLVCGPRNLRHEVARICS SGLADNLHFESISFNW
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 495 | 495 | 3.0E-227 | – | |
SFLD | 1 | 496 | 496 | 0.0 | – | |
SFLD | 1 | 496 | 496 | 0.0 | – | |
Phobius | 1 | 30 | 30 | - | – | |
PANTHER | 1 | 495 | 495 | 3.0E-227 | – | |
Pfam | 2 | 76 | 75 | 6.0E-9 | ||
TMHMM | 4 | 18 | 15 | - | – | |
TMHMM | 30 | 52 | 23 | - | – | |
Phobius | 31 | 50 | 20 | - | – | |
PRINTS | 35 | 58 | 24 | 1.1E-7 | ||
Phobius | 51 | 69 | 19 | - | – | |
PRINTS | 60 | 80 | 21 | 1.1E-7 | ||
TMHMM | 67 | 98 | 32 | - | – | |
Phobius | 70 | 98 | 29 | - | – | |
Phobius | 99 | 326 | 228 | - | – | |
ProSiteProfiles | 106 | 210 | 105 | 12.035 | ||
SUPERFAMILY | 106 | 188 | 83 | 9.83E-5 | ||
Pfam | 116 | 207 | 92 | 3.1E-20 | ||
CDD | 117 | 291 | 175 | 2.5936E-35 | – | |
SUPERFAMILY | 198 | 268 | 71 | 4.85E-12 | ||
Gene3D | 198 | 324 | 127 | 6.6E-17 | ||
Pfam | 214 | 480 | 267 | 2.0E-31 | ||
Phobius | 327 | 352 | 26 | - | – | |
TMHMM | 328 | 350 | 23 | - | – | |
Phobius | 353 | 371 | 19 | - | – | |
TMHMM | 370 | 392 | 23 | - | – | |
Phobius | 372 | 392 | 21 | - | – | |
Phobius | 393 | 496 | 104 | - | – | |
Gene3D | 393 | 494 | 102 | 1.1E-5 | ||
PRINTS | 412 | 430 | 19 | 1.1E-7 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. | ||
Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi5g1v0297000.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…