Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0299700 |
| Transcript ID | LotjaGi5g1v0299700.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pectin acetylesterase; TAIR: AT5G23870.2 Pectinacetylesterase family protein; Swiss-Prot: sp|B9DFR3|PAE9_ARATH Pectin acetylesterase 9; TrEMBL-Plants: tr|K7LL20|K7LL20_SOYBN Pectin acetylesterase; Found in the gene: LotjaGi5g1v0299700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61648571..61656479) extracted from Lotus japonicus Gifu genome v1.2.
TTCTGTTACGCGGTGGGTCCACTACCCTTGTTTTCCAATATTTACTTATTAATCCTCAATACGACGCCGCACACCTTAAT TCCCTTCACGTCTCCCTCCTCTCAATCTCTCAAACAAACACCTTCTTCTCCTCTGTTTGTTTTCACTTTTCACGATTCCA AACAGTCACTACAATACAAGCTACTAATCGCATTTCTGAAAGTGATTCTCCCATTTTCACTCCTTTCACGATCCAATTTC CCTTTCTAGCTTCTAGATTCCGCGTGTGTGAGTGAGATTACTTACCATTACCATTCATAATTACTACTTGTTATCACACT GATTGCGACGGCGACGCCAATCTCTATCCGTTTCTCTTCACCAATCAATGACGCGTCCATTTCACTTGCGTGAATTTCCA ATTCCATTGTGATCTCTCTTTCTCCATTGCACTCTGAAAAGTGAAAAAACCAAGTCTAAACAAATAAGAACAAAGCAGCG AGCGAAGATGAACGCCGCCGCCGTGGCTTTGGCGTTGTTCTATCTAACCGCGGCGGTGGTGCCGTGGCGCGTTCTCTCGA AGGCAGAGCAGAGGCTTCAGGTGAACATGACGCTGGTGAAGAACGCTCGTGATACCGGTGCTTGTAAGTCATTTTTTTCA ATTATTAATTATCTTATTAAATTATTAACAACAATAATAATTGTTTATTGAAATTTGGAGAGTCTGAGAAATTTGCAGTG TGTTTGGATGGGAGTTTACCGGCGTATCATTTGCATAGAGGATATGGAGCAGGACAAGATAACTGGCTTCTTCAGTTTGA GGTACAAATTGCTTTCTCACACTGTTTTGCTTTTTTCTTTAATTGAAAAAATAAATGAAAAGATTGGTTGCCATGTGAAT AAAATACTTCTAGTATTATTATATCCAATTTATATGATCTTGTCTTGTGCTTATGAGTTGTTATTTGCATTTTTGCAAGG CTGACTATTATGTCGGGAAAGTAGAGAATACAAATTGATGTCAAATAGTGACAAAAAGATGTTAGTATTGCTAACCACAA ATTACCAACAACGTCTAGTAGAGATACAATAGTTGAGCTAGTAGTTTAATTTTAGACGGTATATGTGAAAAAATAATTTG TAAAAAGAAAATTTATCCATTTATTGTGATTTTCGAGCCATGAAATGTCAGTTTCATGACTGCCGTTGTGAAATATCTTG AAAAACAAAAAAAGTTAATTGTAGTTATTCACCTAAGCTATTAACCGCGAGGTTCGACCCTTGTTTGTATAATAGTACAT ATTTTTGGTCAGTCGTTTATTGCTTGGTGTAAGCAAACAATGTTTGATATCGTTTTCGTTATGATAGTGCTGATGTGGTT GTGTTTTTCTTTTGTAAAGTTTGGAAAAAATCGCAAATCAACACACAAAATCAAAACAATGTATATGAATAAAAAACTCA GTGTACATTTAAAGAACTTAATGTATACTTTGAACGATCAAATTTTGAGTTTTTTAATTATTTAGTCCAAATTTTGATCA TTAAACAATGTATATGAAAAAATATTTGACGAAAAAGATCTCAACTATTTATTTTCAAACCATGTGGAGATTAATCTAAT GCCCGCCCGTGAAATACCTTTGTAAAAAAAAAAGTAAGTAGAGATTATGAATGATATTTGAAAAAGTGATTGAAAAATAA AATATCATAGAAGAGTAAAAAAATATGAATGAATGTGTACAAAAATTCTTCTGGTGTTGGGCGTGGTGATTATGAACGAC AGTGCTTTTCTGTTGCCTCTGCCTAGAGTTTTGCGCGTGCACTTGCTTTGGGAGCTAAAATCCGCTGTTTCGCTTCCTCG CGCAGCGACACCATCTATGCTGACGTGGTTGCTCCCTATTGGTGACTAAAATGTTTTGGTATTCATCATCTTTCATCTCT ATATAGATTTTCAACCTTTTAAAGGACTTCTTAATAAAAATATAACTAAATAACATAAATAGGAGTATCTATTTGGCATG TTATTTCTCAAGACTTCTCAATCCGTTCACATTTTTGTACACTGTAAAACGTACAAGCAATGATTCACCTAACAGCATTC AAATTAAGAAATCATGTACCTGATCATGGCCACAGGGCCCAACTTACATAAGCAGAGTGCTTCGATAACGTGGAGTTAAA TTAAAGAAAGAAGGCATTTGCAATTTGACCCATCATGTGTCATGTCAGAGAATGAAGTATCATACCAAACTTTCAATCCA AGCAAGGAATTGGAAATCTGACATGATGGAATGAAATGCCAAAGTGAATAAACTAGCAACAAGTTAGTTCAGTTAGCTTG GTGGAGCCTGAAACCCCAATTGAAGCAATAAACACTTTAGTCCCACATTCAGAAATCATTAATGTTCATCAATTTATGGT ATATACCAGGGAGGTGGGTGGTGCAATGACTTGACATCATGCTTGGAAAGAGCCAATACTCGCAGGGGTTCAACACTTTA CATGACCAAGTGGGAGGTCTTCTCTGGTATTTTAAGCAACAATGCCACACTTAATCCAGGTAAAACAACAACTTTTACAT TCTTTACTTTTTTTCTTCTTTCATATGAGAAAGTTTCTTTAATATATGTCAAGAACTGCTAACAATTTTCTAATTGGAAA CATCTTTATATCATAGTAGTAGGTATTAGGGGGGACATCAACTTAGATCAACTCTCACTTTGCACTTTGGCTGTCACAAC ATATATATAATTGTAACACAGCTGTCCTTTGATTTTAGAATCTACGGTTGACTGACAAACAGGGCAATCCAATTGTTCAT GTTCCTCAAGATTCCTTTTCACGTGCTCTTGTTCCTCCATTGTTCTTTCACCTTAATTACTGCCATTTTCTTCCACTAGA AACTGCTCTTGTTCTTCAGCATAATGCTTCCCAATCCTCTCTGCTTCTGTTGGCATTTAGTTAGACCCGTGACTGTTTGT TCTGTAATGACAAATAACACCAATATTCCAGTTTCATAAACACCTGTGTCCTGTTTTCATTTCTTCATCCCCAGATCCAC ATTCTCCATAGACATACAACATTTCTAAACTAGAGATAATGTTTCTCATTCTAATATTTAAAAATGATCTAGACAAAAGT TATTTTAAAATATTTAGTAATTCTAAAGCGAGTAATTTTATAAAAAAGAACAGACATTTTAACTACAAATAAAAAATTGA GATTATAGTTTAGTTAAAAGATGTTTCAGTGTCTCACATAGGTGGTTCAAGAGCAAAACAATGGTTATAAGTGAGACCTT TTTTTGGTCAAATAAGTGTGAGACTTTGCGTCTGTTTGGTTTGGGGGAAGGGAAAGGAAAGATTTAATTGTGGAAAGAAA GCACACAAACCAATGCACCTTCCCCCGTTTGGTATGAATAAAAGAAGGAAGGAAAGAATGGTTTTTTGTGGACCCCTCCA GAAAAACTTTCATCCCAAAATGAAGAGAAAAGGACAGAATGTGTATGATTTTTGCTCAGAAGACAATTTTATCCCTACCA CTTTGCTTATTCTAACTGCCAATTTTTGTATAAATACGTTCTTTTACAAAACACAAAAGCTTTCATTCTTTTATATATAT TTTCCATTTGATTTAACTTAAATTATTTTACTTCTAAACTTTTAATGCGTGGAACAATTTATTAAAAAAATATTTTTAAA AAGGTTTTACATTAATTTGGAATAATGAATATAATATAAAAATGTTGAGGATGTTTATGTCATTTTATACATACACACTT TTCTTTCCACCCACTTTTTCTATTCCTTTCTCCCTAAACCAAACAACCTAAAAAATCATCTCACTTTCATTTCTCTTTCT TTCCTTTTCCTTTCCTTTCTTTTCCTTTCTTTCCTTCTACTTTTCTTTCCGAACCAAACATAGCCTTTGAGTGTTGGAAA TTGATTGTTAAACTTTATTTTTTTTTGTCAAAGATTGTTAAACTTTTTAGACTAGACCACATGTCACACACTCACACCCA TTCTGTTGAACCTTCTCCAAAGTTTTGGGCCACCGGCCCACGTGCATCTAGCCCAAAATATTTAAGCCATCCAATAATTC CTTTTATTTTTACAATTTCCTATTATTCTCTCCAAAAAAAATTGTTCACTATAAGAAAGAATAGGGCCTATTCCCCTATA TCCTATTTATTTCTTGCTCTTTGCTTTTTGGATTCTATGGACTGTTTTATTATTAAGTTCCTGCATTTGTCTGTGAATGC TTTGCTAGACTTTTACAATTGGAACCGAGTGAAGCTGAGATATTGTGATGGAGCTTCATTTACCGGAGATAGGGTGTTCA ATAATGGGGTAATTTCCTGTTTTCTCAATGCATCTCCCAAAAATCATTTTAAAAAAGGAAAGAACTTGACATATTCCTTT TATATTTCTTCAATACTACTGTAAAAAGAAATTGTTAGTGAATAAAATCTTGAAATTTGGAACTTTGCTTATATGTTCGG TTATTTAGTATAATCTTTCTCTCACAGATTCAATTAGTTTTAAAATTTAAAAAACTTGTGTTTATAATTAAATTGTTTTA ATTAATTCCTACTCTTTAAATTTTGAGAAAATAGTTGATGCGCGGTTGCAAACTTCCTTTACACATGTGTTCAATTGATT TTCATCACGTAATAATTCTCTTAATTAAAATTAAAAAGAGATGTAGTTTCTTGGTCCTATGTGATGGAATGTTTATGTAA AATTTCCTTACACGACAATGTATCTATTATATCTTGAAGTTTATTAAACTTTTATTTAATATTGATTTGTATAATGAATC ATGGCATAATCCTAAACCAGAACACCATTACTAGTTTTCCAAAATTACAATGAAATCAGGAGTGGATTGGGTTGATTCAC GATGATCCCAATACACCCACAATTCAGAACAAATGTTTAAATTCCATCTCACCATACATTAGACAAAGAACTTGAGATTT GTATATATAGTCTAGGACTCTCTCACCGCTTACTATTTTAGACAATGTAAGATTTTTCCAATATATTTTCCTTAACTGTT TTCTTCCTTTAACAACATTAGTAAAGTGTTACTTACATTACAATCAATCACAACAATCAACTTCACAAGCATAAGTGTTT CATCAACGTTTTTCATAATTTCCTTGCTCAAAGTATAAATTCAAGTTTACTGAATAACCTGTTTTTATTTGTGTACAACA GACAACAACGCTTTACTTCAAGGGGCAAAAAATTTGGGAAGCCATTATTCGCGATCTTCTACCAAAAGGTTTAGGAAAGG CACGCAAGGTATATATACATATTTGTGGACTCTGCTTATTTTAATAAGTTATTCATAATTTCATATATTATCTTATGAAT AAACGCTTATATTGCATATAGTCTATTTTAGATTTATTTGAATAAGTTTCTCAAATTAGTTTATTAATATATGATTAATT AAATTGGTTACACAAACTCTCTAATATATGTCTCTTGTGTAGGCTTTGCTTTCAGGCTGTTCAGCAGGAGGTTTAGCAAC CTTCCACCATTGCGACAACTTTGCCAAGTATTTGCCAGAGAATGCTAAAGTGAAATGTTTGAGTGATGCCGGTTTTTTTC TTGACGAGTATGTTAAATGTTCGGATTAGTTCCACTTTTATCAGTATCAATTCTCGCACCAAAAGCTTCTTCCTACAATA AGTTTTGACTTTAGAAACAATTGTATAAGGATTCCTAATCATTCACTAGGTCTATTTTGAGTCGTTACAACATAATGTCC ATCTCTTTTCTGTATTTCTTTAAACTATAAACATTAACATTTCCTTTACTCCCCTTTTTGCAGAAGAGATGTAGGTTTGA ATCACACTATGAGGTTCTTCGTCAAAAGTCTAGTATCATTACAGGTAACCCTTAGAAGTGTCACTTGCCTTTTGAAAATT TAGTTAGTTAATCATCTGACAAGAGCTTAGTGTGCTTTCTGATCAAAGATAAACTTAGAAGTTAAAATTCAAGCTGGAGA GCAAGTTTATTTCTTCATAATTCATACATATGCTATCTGTTTATCATCTTCTAAGCTGCGAGAGGTCAGAATAGTTGTAA TGTTGTATGGTTATGTGAACAAATCTTAATGAAAAGTAAAGCATAGTGCTCAATTAATAGATATTCTTAACATGGCAAAA TAATGATGATTGATATTTCTTAATCATTACTTCTAACCCATCACTTCAATATCTTAATAAAATAGACAAAGGAACCACAT GTTACATTCAATTTTCAAATTGCATCACAGAAAGTTACTTGACAAAGTCTTGTGCAACAGGGGATAGAGCAGAATCTGAA CAGAAACTGCACAAGTGCCTTGTTCTTTCCAGACTTGGTATGCTTTTTCATGAACCTGCATCATTTTCTCAGGAAAGTTA TGCAAGATATTGACTTGTGTTATGTTCCATGCAGTGTTTCTTTCCGCAATATGCGATACGATACATATCAACACCATATT TTATCTTGAACTCCGCCTATGATGTGTACCAAGTAATATATTGCGCACTATCTTATTCTTATAGATAGTTGATGAATTAT GAGATGAATACAATTTCTTAATGTCTGCAGTTTAACCATATATTGGTGCCACCTACTGCTGATATGCATGGACACTGGAA TCACTGTAAGCTGAACCCAGCAGCATGCACACCAGACCAAATTAAAACATTGCAAGGTTCCTCCTTCAATTTCTCTGCAT TCACTCTGCTTTTATTGGAACAGCTTCCACCCATTCAATCTTTTAACAAGTTTCTTTGGTGTTTATAAACATGTTGGTAT TTTTTCAGGAGAACTAATGTAGTTTATAAACTAGATAGAATTTGAATTGTGAAAATGGATGCTTTTTTATTTGTTACACT CTATTAACAAGGGAGTATACGTTTATACTAGGATTAAAAAAATCCTTTCCTCAACTAGTTGATACTATTCCAGGTAAGAA ATATCAAATTAAATGAAGTAATTACAAATTGGAAGAGATGATTCTGAGTGAAGATTTGCTCAGATTGGCAAGACACGTTT CATGTTATAGTGAGGATTTGATGCAATGAAATCTCCTCAGATTTTTACTCCATACATATGATCCTTCTTGTTGTAAATAA GACCGATTTTCCTCCCTTTTTATCAGGTTTTAGGCTCCACATGCTTGCAGCTTTGAGACCATTCACTATATACTCAGCAA GAGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAGTGAATCGCAAGATACATGGTTTGGGGATGATTCACCA AGAGTAAACAACAAGGTACCTATTTATAGTATGTGGAGTGTTTATGAATTCAATCTTGCTCAATAAAATCAATGAAATAA GAAAAGTGACTTCAGATGATTAAGAAAATCTGTAAGATAAGAAAAGGAGTTTGTTTGAATTGTAAAAAAAAACTCTAAGA TCTATGAACTGTGTCAATGTGCTAGTCTTATATTGTTTGATTTTCATCCTAGCCTAGCAATTTTCGTAGTAGCTACATGG TTAAACTGCTCTATCTTTTACAGACTATTGCAGAAGCAGTTGGTGGTTGGTATTTCAGCAGAAACAAAACCAAGGAAATA GATTGTGCATATCCATGTGATACAACTTGTCATAATCTTATACCATGACCTCAGGTAATGCCTTAAAAACGATTCTTAGT GTCTGGGATATCATGGTGAATTTATAGCCTATTGGTCTTACTCAATATGAAATGCAGGTAAAGATTGACAGAGATTTTTC ATACAAAGCAATATCAATACATAATGAATACTAGGCAGATAGAAAATTCTTTATAGGAGCAAGAAAGGGTGTAAAAGGAA CGAAAAGAGAAAATGTGATTGAATGGTTGTTTTTCAATTATTTCTTATTAATTACTAGTTTTTTTTACC
CDS sequence (LotjaGi5g1v0299700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAACGCCGCCGCCGTGGCTTTGGCGTTGTTCTATCTAACCGCGGCGGTGGTGCCGTGGCGCGTTCTCTCGAAGGCAGA GCAGAGGCTTCAGGTGAACATGACGCTGGTGAAGAACGCTCGTGATACCGGTGCTTTGTGTTTGGATGGGAGTTTACCGG CGTATCATTTGCATAGAGGATATGGAGCAGGACAAGATAACTGGCTTCTTCAGTTTGAGGGAGGTGGGTGGTGCAATGAC TTGACATCATGCTTGGAAAGAGCCAATACTCGCAGGGGTTCAACACTTTACATGACCAAGTGGGAGGTCTTCTCTGGTAT TTTAAGCAACAATGCCACACTTAATCCAGACTTTTACAATTGGAACCGAGTGAAGCTGAGATATTGTGATGGAGCTTCAT TTACCGGAGATAGGGTGTTCAATAATGGGACAACAACGCTTTACTTCAAGGGGCAAAAAATTTGGGAAGCCATTATTCGC GATCTTCTACCAAAAGGTTTAGGAAAGGCACGCAAGGCTTTGCTTTCAGGCTGTTCAGCAGGAGGTTTAGCAACCTTCCA CCATTGCGACAACTTTGCCAAGTATTTGCCAGAGAATGCTAAAGTGAAATGTTTGAGTGATGCCGGTTTTTTTCTTGACG AAAGAGATGTAGGTTTGAATCACACTATGAGGTTCTTCGTCAAAAGTCTAGTATCATTACAGGGGATAGAGCAGAATCTG AACAGAAACTGCACAAGTGCCTTGTTCTTTCCAGACTTGTGTTTCTTTCCGCAATATGCGATACGATACATATCAACACC ATATTTTATCTTGAACTCCGCCTATGATGTGTACCAATTTAACCATATATTGGTGCCACCTACTGCTGATATGCATGGAC ACTGGAATCACTGTAAGCTGAACCCAGCAGCATGCACACCAGACCAAATTAAAACATTGCAAGGTTTTAGGCTCCACATG CTTGCAGCTTTGAGACCATTCACTATATACTCAGCAAGAGGGGGAATGTTCATAAATTCATGTTTTGCTCATTGCCAAAG TGAATCGCAAGATACATGGTTTGGGGATGATTCACCAAGAGTAAACAACAAGACTATTGCAGAAGCAGTTGGTGGTTGGT ATTTCAGCAGAAACAAAACCAAGGAAATAGATTGTGCATATCCATGTGATACAACTTGTCATAATCTTATACCATGA
Protein sequence (LotjaGi5g1v0299700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MNAAAVALALFYLTAAVVPWRVLSKAEQRLQVNMTLVKNARDTGALCLDGSLPAYHLHRGYGAGQDNWLLQFEGGGWCND LTSCLERANTRRGSTLYMTKWEVFSGILSNNATLNPDFYNWNRVKLRYCDGASFTGDRVFNNGTTTLYFKGQKIWEAIIR DLLPKGLGKARKALLSGCSAGGLATFHHCDNFAKYLPENAKVKCLSDAGFFLDERDVGLNHTMRFFVKSLVSLQGIEQNL NRNCTSALFFPDLCFFPQYAIRYISTPYFILNSAYDVYQFNHILVPPTADMHGHWNHCKLNPAACTPDQIKTLQGFRLHM LAALRPFTIYSARGGMFINSCFAHCQSESQDTWFGDDSPRVNNKTIAEAVGGWYFSRNKTKEIDCAYPCDTTCHNLIP
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 24 | 24 | - | – | |
| SignalP_EUK | 1 | 16 | 16 | - | – | |
| Phobius | 1 | 3 | 3 | - | – | |
| Phobius | 4 | 15 | 12 | - | – | |
| TMHMM | 5 | 24 | 20 | - | – | |
| PANTHER | 7 | 398 | 392 | 1.8E-209 | – | |
| PANTHER | 7 | 398 | 392 | 1.8E-209 | ||
| Phobius | 16 | 24 | 9 | - | – | |
| Phobius | 25 | 398 | 374 | - | – | |
| Pfam | 26 | 379 | 354 | 1.1E-156 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Hydrolase activity | Catalysis of the hydrolysis of various bonds, e.g. C-O, C-N, C-C, phosphoric anhydride bonds, etc. Hydrolase is the systematic name for any enzyme of EC class 3. |
Expression pattern of LotjaGi5g1v0299700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…