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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0301500 |
| Transcript ID | LotjaGi5g1v0301500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Remorin; TAIR: AT5G23750.2 Remorin family protein; Swiss-Prot: sp|P93788|REMO_SOLTU Remorin; TrEMBL-Plants: tr|I3T094|I3T094_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0301500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:61859160..61866203) extracted from Lotus japonicus Gifu genome v1.2.
GCCTGAGTTTCTAAATTAACATCAATACATGGCTGAAATTCTTCATTGCTTATCCATTTGCTTTGCTTATTGGAAGAGTG CTGCCTTTCAAGTTTCTTCTTTATAAAACAAAGTAACAATTGTGTTTTTAAGCGAGTTATTATTCATGCGAAACAGTTAT ATTCGAGTTTGAGAACTTTCATGAGAATTTTATTTATATAACAAATTAAGTAAATAAGAATTAACTATATATACTTTTCA TTAAAACAAAATATAAATTTATGTGTCATATAATAATAACAATATATTCACTCATTAAAAAAAATTAATTATTGATTAAT TTAATTTATTGAGTTTATATGAATACAAGATTCTATTCTATAGAAATGTTTGTACACAACTGAGGCTGTCTCTATTAATG TGCTGTGCCAACTCATTGGAGGGGAATTGTGTTTGTACCTACTACATCCACCCAGCTAAGCTTTTGGTATTTCAGTTAAC AGTTACTTCCTTCAACCACAATATCCCAAGTTCCCAACCAACCAACCCTTTCCCTCTTCTCCTATTTCTAGATCTTTTCC TCTCTCATATCAATTGCCATGTTTTTAACTTTCCTATAAAAATATCTCTGAGTTTTGTTACAACACTTCCCAATTCCCAT CACTTTGTGTGTGCAAAGAGTTCTAAGTTTGAAAGATGACAGAGGAACAACCAAAAAAGGTAGAATCTGAATCACCATCA AATCCTCCACCACCAGCTCCAGCTCCAACTGAGAGTACTCCTGCACCTGAAGCTGAAGCTAAACCAGAACCTGTGGTTCA TGATGCTCCAAAGGAGGATGTGGCTGAGGAGAAATCTATAATTCCACAACCCTCTCCTCCAGAAAGCAAGCCTGTTGATG ACTCCAAAGCTATTGTCAAAGTGGAGAGTATGACACTTTTTTTCACTTAATTGTTATTAATTCTTTATCTGCTCCTAAAA GGATTGTATTATATGTGTTTAATCAGTTGGTGAGGAATTGAATTCAAAAGAAGAAGAAAAAAAGGAAAACTGATATAGTT TTTATGTGTTATGCTTTATAACTATCTGTTTGTCTTTTTTTAAAAACTGGTTAAGGTGACCACTGATTAGTTTTGGATTT CCATTTCAGTTACATGGTGAGTTTAGCATAAGAGAAACAGTTGTGACATTTTTTTTTCAAAATTTTTTCTTCAGTTTTTT TGGCAAAATTGACTTAAGGGTCTCATATTCCTTTTCCTCTGTCTCCTGGTATCTGTTTCTCTAACAATTATAAACAATTT TTGTAAATTAATTATACTTTTAGGGAATAGTCTTTTTTTTTATCTACCATGTTTCCTAAAGGGGTTCTCGAAAGTTGACA AAAAAAAACCAAACTCATTATTTACTAAGTTTATGTTTAAAAACATGCTTTACTATTTTGTAAACTACTACTCAGTTTCT TGTATTCAAATTGCTCTGTGTCTCACCATCCAACTGCATGCTAATTAAGACTTGGTATTCAAGTAAAGCTCCAATTTTTG CATATTAAAACTCAAAATATGTGCAAATTCAAAGGAAGAAAGTCCTTCAATTGGCCTTTAATTATAATAAAGCTGTTCCT TATGATTATGTTAAGATCACCAATGTTGACATTTTCCTTTTCTTTTTACTTGAGTGACCTTTACATGGCCTTGAAATTCA AGTGTTATCTTGCATGAATTTTTCACTTTTGAGCCACTTATTTAGTGGCCTCCTGTTTTATTCTTCAGGCATATTTTACT TTTGGTTAGCAATCTGAGCTATACAGCTCAATTAGAACAAGAGAGAAATTTTTTCATATTTGTGTTGCAATGGAACCACT CTTTACAACTAATAGCATGTGCGAATCAGTTTCTCTTTCCACATAATCAATTATTACACCCAGAAGTTACTCACATAATC TTCTTCCCAAAACTAATTATGAGTATAGAATTTCATGTAGAAAGGTTCCAAAAAGGCACTAAGCAAAGCTTCAAATGTCT ATTCTGTTCATAGCTACAAATAGTTGCTTTCACATTTTCTTGCTTTGTAATTCATGCCAATGTACAACCAAACATACGCT TACTTATTGTCCCTTTAATTCACCATACTGTAACTTCCTATTTAATCATCATAGTTATTACCATAAAACATAATATTTAT GTTGATATTGTGTTTATTGTTGTTAATTTGGTTACTGTCAGAGACTCAAGAAGCTGCAGAAGAGAAACCACTTGAGGGCT CTATCAACCGAGGTATGTCATTTTGTCAGTCACACTTGATTTCCCTTTATTCACTTCATATACTGACATTACATACTATG TTATCTCATTCTTCCTCAGATGCTGTGCTTACAAGAGTTGCAACTGAGAAGAGGCTGTCACTAATCAAAGCATGGGAAGA AAGTGAAAAGTCAATTGCAGATAACAAGTAAAAGCTTGCACCACCTGCTTAAGTAGCTATGCTAGTTTCATATTTTAAGT GGATTCAATTCTATCAAATATGGATTTGCAATTAGAAATATATGAAAGCAATTTGTTTAACCAAATCAGCTATAGTTACT GCAACATCAGATGTTCATAGTATTTTATCAGGATTTTGTTATTCAACAAGCTTTTGATTATTTGTCTAAATGAATTTGGT GGACAGAGCTCACAAAAAGCTTTCAGATATTTCAGCATGGGAGAACAGCAAGATAGCTGCTAAGGAGGTTGAATTGAGAA AGATTGAGGTATGAACATTTTCCCCCTCAACCCATAGGGAGTTCGGTTTGCTTTTTATCTCAAAGAAGTGTCAACGTCCG TTTGCACTTGTTTTAATGTGTATCCAAACCTATGTTATAACTTGTAACATATATTGAATTTGTACAATTTCAATATATGT TACAAAAAATGTTTATGTAAGGTCAATCAGGATTCAACATTTGAGTTTAATAACTATGCACACTGATGGTGTAAAAATAC AGACATCCAATCAAGATTCAACATTTTGTCACATCATTGATAAAATAAGTATATAGAAAAAGAAATGTCAAAATATGATT GGATATTTGTGAAAAACTCGTTATACTGTCACGACATATTTGTGAAATGCCAAAGATACGACACAAATGTGGCAAAAGAT AGGGGAAAACAACTGACTTTTCACTGTGAGCAGGAAAACCTGGAGAAGAAAAAGGCAGTATATGTAGAGAAACTGAAAAA CAAAATAGCTATGGTCCACAGGGAAGCTGAAGAAAAGAGGGCATTTATTGAGGCCAAGAAAGGGGAAGATCTTCTGAAGG CAGAGGAGTTAGCTGCAAAATACAGGGCAACTGGAACAGCTCCCAAGAAACCCTTTAGTTTTTTCTAATACCACAACCCT CTAGCCTGATTCACAAAAATGTTGTTGCATTCCTTGTCAGTTCATTAGTCAGTACATGTGTGTGATTTGATTGTCTTTTT GTGAGTTTTAGTGCTTTCAATCTATTATGTGTGAATAGTTATACATATTGGGGGTGTATATACCTACCATTTACTCAGTC TGAATAAAATTGAACTATTCAATTTGTGTAATATGAATTTCTTGTGGCATTAAACCACTAACCCATGCCAGTCACAGATG GATAATTTTGCTAAGCAGGCAATTCATCCAATCCAAGTACTAATTATGCCACGACATAACAGAAAGTTGAACCTTTTTGT TTTATGATTTGAAGTTCAAACTGTGTTTCTCAAGTTATTATTGCCATGTGTTCAAACTTAGTATAGTACAACCCCCATCA TTTGACACATTTAAGCCCTGTACATTTTTTTTTTGAATAAAACACACATTAAGAGCTCAGAGCAGTATATACTCATAAGT CACAAGTAGCAGTTGTTGAAGGGCAAGAACAATATCATTAACTCTCATCCATTAATGTAACTTTTGCCATAAAGTTGTAA GCAAACTTGAACTCTAGAAACTATTCCTCTATCTACCCTTTCCCCCCTCTAAACCAACAAGCAACTAGCAAACAGATCCA GATTCATAGAGTCAATTTTCCTAAATTCACTGCAGTCACGGCTTTGTAGAGTTGTGAAATAAGGGCTCAAGTGAATTTAG GAAATTTCAACAGCAGGAAATCCCTACAAAAAACTCAGACCCTAGGCTGCATTTACAAAAATGAAGAAAATCATACTATC AGATCAAAGTATTGCCTTTCCCTAAGGAGAAGATAATCTTAGTCAAATCTACCATCAAGGAGATTCAGAAAATTGTCTGT TTGTCCCAAGAATCCTATATCACCATCAGGAATATCTAGCAGGTGCTTTAGTGCAGAATCAGAAGTGTCAAGAAATTCAT AATTTCCCGACTCTAACACAGCTTTATCATCTTCAAGCTTTGGTTTGTAGCTACTTGCTTGTTCTTGAATCATGTTGACA TCTTCAAGCTTTGCTATGTGGCTACTGGTTCCAGTGCTTTTCCCTTGCAATGAGACATCAGAACATGACTCCAATTTCGA TGATGATGATGATGATCGTGATGCTTGTGAGACAAGGATTTCACACACTAATCCTTCCTTTCCCTTGAGCATGCGAAATG ACTGCCCAACCTCAGAATGCCAAAGTTGAAGGATGTGATCAGGGCATGTTTTCCCTGCTGAACATGGATTGAGCAATGAA GACTCCATTGACAACCTTGCCTCTGCCTCAACTCTGGCACTCTCCCATTGCACCATATGGCGCGTAGAAGGAGATTCAGA GTGGACCTTGTTTCCATCAGGAATCACAGATGGCTGTTTTTCCCCTAGGGAATGACCAGACCGAAGGAAGCGTTTCTTTA TATGGGTGTTCCAATAGTTCTTAATCTCATTGTCTGTTCTTCCTGGTAGTTGGGATGCTATAGCAGCCCACCTAAAAGAA TGTATGGTTACTGGTTACATGCAAAGTAAATGAATGTAACATCAAAAGTATAGATCTATACAACCAAATATTGAAGTACA ATCAAGAAGTGACGGGGATTTCATTTTCTATTATGAAATTTGAAAGTGCATGTTTGTAAACAAGCCCTTCTGTAGTGAGT AGCTTCTGAGTTTTCTCAAAATAGATTCTAATGAAAGAAAAGCTGATCCAAACATGCTAAAAGTTTTCCTTTTCTTAAGT TTTTGGTCGATAAGGATCCTTGGTGACAGAAAGTATTAAAAGAATGGCAACAAAATGAGAATATGAAACTCTGAAATTGA ACCAGACTCTGTTCAAAGATGTCACATTTTTCCTTACAGCAAGATTTTAAAACTAGCAAGCTTGAAGGTTTCATAATTTA GAAGCATGCGACATGTTCACTGTTCAACTTATGAGCAAAATGAACCTTCAGAACCAAGAGGGGTTGGTTATATCACTTAT ATGAATGAATTTACATGTTCATGAAAAATCAGCAAAAGGTGCGGTGTGGTACCTGTTGCCAAGCAAGCCATGAAGTTGAA TAATAGTACTTTCTTCTTCATCAGTAAATGGGCCACGCTTGATGCCAGGGCGAAGATAGTTTATCCACCGAAGTCGACAA CTTTTTCCACATCGTAGGAGACCTAGTTGTAATTATACATTCACTAAATGAGTTAGATTTAGGGCCTGTTTGTCATTGAG TTTCAATAGATAAAATCCGTAATCCACCTAGGATAGAATCCTTGGACTAAGTTAGATTCATGTCTTCACCTTTCTTCTCA ACAGTGTGTCAACTTTTCCCTCTATTCATAGCATTTCAAATCCCTCATCCAACAAGGTTTTGCAAATCATTTTACAAAGG GGAAAGTATAAGTGAATCAAAATATAACATATGGCAACAAATTTTGTTATAGTAGTAGATATTGAGTGACAATGTAATCA AATTAGCAACATAGCATTCACATTAGCCCATTGCTGATACACTAATACTATCATAACCTGCACTAGAGGAAGGAACTGTA TTTAACACCAAAGAAGCACTATTACACGCAGAAATTGCTACTAAGAGAACAGGCACAAGCAACAAAGAAGTTTTCTTCAT TATTAAAACAAGGACATATTGTGCTTGGAATTTCTTCAACTAATTAAGGTCTATAACCTTGAAGAAATGAAAATTGCAGT TGTAACTTGTAAGAAAACAACAACACAAACTTTTGCCCTATTCCTATGTATCTTCCAAATTTTCCAAATACTTCTAGAAA GAAAGGAACAAAAAAGGTGGGGGTCACACATAAAGCACCTCACAAGAAAAGCAAAATCAGAGAAGAAGAAAATGATAAAG AAACTACAGAAAAAAGGGCATAGGAAGCTGCACCTGCATGTTTTGGAAGTGAACGCCAGCTTCCATGACCATGCTTCTTG ATGTAGTCAGCTAATGCTTCATCTTCTTCAGGAGTCCAAGCACCCCTTCTCACTCCATGTTTCTCACAACAAGGTGCTTT ACCCATTTTCCACCAACTCACCCCCTAACCACACACCCCAACAATAAATTCACCACATTAATAACCCAAAGTTTATTTTT TTATAGTATTTCTGAACATTAAATACCATAACTTGCACAAACAGATGAAAAAAAAGGAAGAAGAGTGTTGCAGAAGGAAA CCAAGTTAAGGGTTATAAATGCATATGAACAGGGCGGCTAAGAGGGTCAGGGTGAAATTGAGAGGTACATTTATACCCTT GTGGTTATTAATGGTGAAAATGCAGATGAGAAGAAGGAAGAAAAAAACAGAATTGAAGCTGGGAAGTGAGGGTTGCAGAA AAGCCCCACTGAAGAAAGAAGCAGCACTCAACCCGAAAAGGGTAATGTAATCAAGGCTTGGAGATGCAGAAAACGAGGGT GGCAATGAATGAAGGAAGAAAAAGGGTCCACAAAAATATCATCATCCCTTGAGGACAGTGCTGTGCCTGTGATCAGTTTG ACGTCATGGTTTGAGAGTTGTTGAGTTGAGTGAGTGAGTTCAGCTGGTTCAGGTTCAGGTTCAGGAGCATCCTTTTGTGT GAAAAATGAAAATGAAGCGGTGGAGAGAAGAGAGAATGCAGAAAAGACAAGACAGTGATGTGGGAACCGTATCTCTAATC TAAT
CDS sequence (LotjaGi5g1v0301500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACAGAGGAACAACCAAAAAAGGTAGAATCTGAATCACCATCAAATCCTCCACCACCAGCTCCAGCTCCAACTGAGAG TACTCCTGCACCTGAAGCTGAAGCTAAACCAGAACCTGTGGTTCATGATGCTCCAAAGGAGGATGTGGCTGAGGAGAAAT CTATAATTCCACAACCCTCTCCTCCAGAAAGCAAGCCTGTTGATGACTCCAAAGCTATTGTCAAAGTGGAGAAGACTCAA GAAGCTGCAGAAGAGAAACCACTTGAGGGCTCTATCAACCGAGATGCTGTGCTTACAAGAGTTGCAACTGAGAAGAGGCT GTCACTAATCAAAGCATGGGAAGAAAGTGAAAAGTCAATTGCAGATAACAAAGCTCACAAAAAGCTTTCAGATATTTCAG CATGGGAGAACAGCAAGATAGCTGCTAAGGAGGTTGAATTGAGAAAGATTGAGGAAAACCTGGAGAAGAAAAAGGCAGTA TATGTAGAGAAACTGAAAAACAAAATAGCTATGGTCCACAGGGAAGCTGAAGAAAAGAGGGCATTTATTGAGGCCAAGAA AGGGGAAGATCTTCTGAAGGCAGAGGAGTTAGCTGCAAAATACAGGGCAACTGGAACAGCTCCCAAGAAACCCTTTAGTT TTTTCTAA
Protein sequence (LotjaGi5g1v0301500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTEEQPKKVESESPSNPPPPAPAPTESTPAPEAEAKPEPVVHDAPKEDVAEEKSIIPQPSPPESKPVDDSKAIVKVEKTQ EAAEEKPLEGSINRDAVLTRVATEKRLSLIKAWEESEKSIADNKAHKKLSDISAWENSKIAAKEVELRKIEENLEKKKAV YVEKLKNKIAMVHREAEEKRAFIEAKKGEDLLKAEELAAKYRATGTAPKKPFSFF
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 72 | 72 | - | – | |
| PANTHER | 1 | 215 | 215 | 7.2E-79 | – | |
| PANTHER | 1 | 215 | 215 | 7.2E-79 | – | |
| MobiDBLite | 12 | 27 | 16 | - | – | |
| MobiDBLite | 36 | 53 | 18 | - | – | |
| Pfam | 47 | 101 | 55 | 7.3E-21 | ||
| Pfam | 105 | 210 | 106 | 4.7E-29 | ||
| Coils | 140 | 167 | 28 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0301500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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