Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message

LotjaGi5g1v0311800.4

Overview

Field Value
Gene ID LotjaGi5g1v0311800
Transcript ID LotjaGi5g1v0311800.4
Related isoforms 4
Lotus japonicus genome version Gifu v1.2
Description Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; TAIR: AT2G32010.1 CVP2 like 1; Swiss-Prot: sp|Q0WQ41|IP5P7_ARATH Type IV inositol polyphosphate 5-phosphatase 7; TrEMBL-Plants: tr|A0A0B2Q3A0|A0A0B2Q3A0_GLYSO Type I inositol-1,4,5-trisphosphate 5-phosphatase CVP2; Found in the gene: LotjaGi5g1v0311800
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:62979761..62982377) extracted from Lotus japonicus Gifu genome v1.2.

GCATACTTCAAACTCTGAAAATTTGTTCCCCAAATCTGGTTCTGCTTATTTTGATTTGTTTTCTTATATAAACTCAATTA CTGTGGTTTCTTTTTGTGAATTAGATGTATTAACACTGCTTTGCTTCTTCAGGAAGTGATGTGGATTACAGAAGCAGGAG TAGCTGCTCTGAGAGAGAGCCACGCACGATCAAGAAGAGCAAAACAGGTAGAGAATCACTCAGTTCCATTTCTTGAACCA TGCTCATTTGAAGATCTTGGTATTATTTAAGACACTGAGTGACCAATCATTGAAATGAACAGAGAAATTTAGCAGGAGTG CTGATCAGGTCAGGCGAGGAAGAATGAATCTTGACCATCCTCGAATTATAGATGTGCAGAACTATAGGTATGTTGCTTCT CAGATTTTACCTTATTTATGCAGAAATCTAGAAATAAGGCTTTGTTCAATTCTCACAAGTGTCTCTTTCCTCTGGGAGCA GCATTTTTGTAGGTTCATGGAATGTAGCTGGAAGATCCCCACCAAGTAATTTGAGTTTAGATGATTGGCTTCATTCGTCA CCACCGGCTGATATTTACGTTCTTGGGTAGGGATTTGTACCTGTCAACGTGTATTCTCTTCAATCAAAGGTAGCATTAAC TTTATCAATGATGCATTTTTTCTTTTTCTCTTCAGATTTCAAGAGATAGTTCCCTTGAATGCTGGTAATATCTTAGGGGC AGAGGACAATGGTCCAGCCAAAAAATGGTTGTCTCTCATCAGAAAGACTTTAAACAATCTTCCCGGCACCAGTGGAAGCA GTGCATGTTATACACCCTCTCCCATTCCTCAGCCAGTTGCAGAGCTAAATGCAGATTTTGAGGGATCAGCAAGGCAGAAG AATTCTTCTTTCTTCCACCGACGGTCATTCCAGACAACTTCTAGTGGATGGGGAATGGACAATGATCCTTCAGTTATGCA ACCACGACTAGATCGAAGATACAGTGTCTGTGATCGTGTAATTTCCGGTCACAGGCCAAGTGACTTCGATCCCAGTCTTA GATGGGGTTATAGGTCAAGTGACTATTCCAGGGCAAGTGACTACTCAAGGCCAAGTGACTACTCAAGGCCAAGTGACTAT TCAAGATGGGGTTCATCTGATGATGATAACGGCCTTGGAGATTCACCGAGTACTGTCTTATATTCACCAATGTCTTATGG TGGACCTGCTGCCTCTAATGAAGATGGATATGGCATGCCAGGAAATTCAAGGTACTGCCTTGTTGCAAGTAAGCAAATGG TGGGAATATATCTTACCATATGGGTGAGAAGTGAGTTGAAAGATCATGTTCAAAACATGAAAGTATCATGTGTTGGTAGA GGATTGATGGGCTATCTTGGAAACAAGGTGAAATTTAAATCAGTCATGATAATGCTCATTTATATTTCTCTTTTTCTTAG ATAAATTTTCAGCTAAAATGACTATTGATTGAAATTAGCTTAAATAAGCGATTTTGCTTGTACTTGCAGGGATCCATCTC AATTAGTATGTCTGTCCACGAAACAAGCTTTTGCTTTATCTGTAGTCATTTAACCTCAGGACAGAAGGAGGGAGATGAAC TAAGAAGAAACTCTGATGTGATGGAGATTCTTAAGAAGACAAGGTTTCCTCGTGTTCATGGTGTGGACAACGAGAAGTCT CCTCAGACAATCCTTGAGCATGAGTAAGAATCTGCTCACACTCATATATTATTTAATAAAATTATCTTTGTAATTTAAGG AATTAAGGTCCCTTGCCATTATAATATACGACCACCTTGTCCAGGTTTCTAGTGTATAATGCATACACTAACCCTTCAGT TTCCCCTATGATTGTATTCCCTTCTCATTAAACAATTGTTTTGCACTTTCTCATATTTTTATTCATCAATGTAGTCGAAT TATATGGCTTGGAGATTTGAATTATCGGATTGCTCTTTCCTACCGTTCTGCTAAGGCACTTGTTGAGATGCAAAACTGGA GAGCATTGTTAGAGAATGATCAAGTATGTCTGTTTAATCCATGTTTATTGTTTGCCTTGAAATGTATAATTGTATGACAA GCTTATGGAGTCTTAATTATTGACATTCCTGGCAGTTGAGAATAGAGCAGAAAAGAGGTCGTGCGTTTGTGGGATGGAAG GAAGGGAAGATATATTTTCCTCCAACATACAAGTACTCAACTAATTCAGATAGATATGCAGGAGATGATATGCACCCCAA GGAGAAAAGGAGAACACCTGCTTGGTAAGATCATAACATCATCACCTAATAGGAATAGAGAATGAAGCATAAAGTATTTT TGATAGCTTATGATATAATTTTTAAAACTGTCTCAACATATATTGCTGATATAAGTATTATTCTTTTTTTTTAGGTGTGA CCGTATTTTGTGGTACGGAGAAGGTCTCCATCAGTTATCTTATGTCCGTGGGGAGTCAAGGTTTTCAGATCACAGACCAG TTTATGGCAGATTTGGGGCTGAGGTTGTGTCAACTCATGGCAAAATGAAGAAAAGCATGAGTTGTTCTCGTTCCAGAATT GAGGTGGAGGAACTTCTGCCATATTCTGGTGGATACACTGAGCTAACCTTTTTCTAA
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0311800.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTGGATTACAGAAGCAGGAGTAGCTGCTCTGAGAGAGAGCCACGCACGATCAAGAAGAGCAAAACAGAAATTTAGCAG GAGTGCTGATCAGGTCAGGCGAGGAAGAATGAATCTTGACCATCCTCGAATTATAGATGTGCAGAACTATAGCATTTTTG TAGGTTCATGGAATGTAGCTGGAAGATCCCCACCAAGTAATTTGAGTTTAGATGATTGGCTTCATTCGTCACCACCGGCT GATATTTACGTTCTTGGATTTCAAGAGATAGTTCCCTTGAATGCTGGTAATATCTTAGGGGCAGAGGACAATGGTCCAGC CAAAAAATGGTTGTCTCTCATCAGAAAGACTTTAAACAATCTTCCCGGCACCAGTGGAAGCAGTGCATGTTATACACCCT CTCCCATTCCTCAGCCAGTTGCAGAGCTAAATGCAGATTTTGAGGGATCAGCAAGGCAGAAGAATTCTTCTTTCTTCCAC CGACGGTCATTCCAGACAACTTCTAGTGGATGGGGAATGGACAATGATCCTTCAGTTATGCAACCACGACTAGATCGAAG ATACAGTGTCTGTGATCGTGTAATTTCCGGTCACAGGCCAAGTGACTTCGATCCCAGTCTTAGATGGGGTTATAGGTCAA GTGACTATTCCAGGGCAAGTGACTACTCAAGGCCAAGTGACTACTCAAGGCCAAGTGACTATTCAAGATGGGGTTCATCT GATGATGATAACGGCCTTGGAGATTCACCGAGTACTGTCTTATATTCACCAATGTCTTATGGTGGACCTGCTGCCTCTAA TGAAGATGGATATGGCATGCCAGGAAATTCAAGGTACTGCCTTGTTGCAAGTAAGCAAATGGTGGGAATATATCTTACCA TATGGGTGAGAAGTGAGTTGAAAGATCATGTTCAAAACATGAAAGTATCATGTGTTGGTAGAGGATTGATGGGCTATCTT GGAAACAAGGGATCCATCTCAATTAGTATGTCTGTCCACGAAACAAGCTTTTGCTTTATCTGTAGTCATTTAACCTCAGG ACAGAAGGAGGGAGATGAACTAAGAAGAAACTCTGATGTGATGGAGATTCTTAAGAAGACAAGGTTTCCTCGTGTTCATG GTGTGGACAACGAGAAGTCTCCTCAGACAATCCTTGAGCATGATCGAATTATATGGCTTGGAGATTTGAATTATCGGATT GCTCTTTCCTACCGTTCTGCTAAGGCACTTGTTGAGATGCAAAACTGGAGAGCATTGTTAGAGAATGATCAATTGAGAAT AGAGCAGAAAAGAGGTCGTGCGTTTGTGGGATGGAAGGAAGGGAAGATATATTTTCCTCCAACATACAAGTACTCAACTA ATTCAGATAGATATGCAGGAGATGATATGCACCCCAAGGAGAAAAGGAGAACACCTGCTTGGTGTGACCGTATTTTGTGG TACGGAGAAGGTCTCCATCAGTTATCTTATGTCCGTGGGGAGTCAAGGTTTTCAGATCACAGACCAGTTTATGGCAGATT TGGGGCTGAGGTTGTGTCAACTCATGGCAAAATGAAGAAAAGCATGAGTTGTTCTCGTTCCAGAATTGAGGTGGAGGAAC TTCTGCCATATTCTGGTGGATACACTGAGCTAACCTTTTTCTAA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0311800.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MWITEAGVAALRESHARSRRAKQKFSRSADQVRRGRMNLDHPRIIDVQNYSIFVGSWNVAGRSPPSNLSLDDWLHSSPPA DIYVLGFQEIVPLNAGNILGAEDNGPAKKWLSLIRKTLNNLPGTSGSSACYTPSPIPQPVAELNADFEGSARQKNSSFFH RRSFQTTSSGWGMDNDPSVMQPRLDRRYSVCDRVISGHRPSDFDPSLRWGYRSSDYSRASDYSRPSDYSRPSDYSRWGSS DDDNGLGDSPSTVLYSPMSYGGPAASNEDGYGMPGNSRYCLVASKQMVGIYLTIWVRSELKDHVQNMKVSCVGRGLMGYL GNKGSISISMSVHETSFCFICSHLTSGQKEGDELRRNSDVMEILKKTRFPRVHGVDNEKSPQTILEHDRIIWLGDLNYRI ALSYRSAKALVEMQNWRALLENDQLRIEQKRGRAFVGWKEGKIYFPPTYKYSTNSDRYAGDDMHPKEKRRTPAWCDRILW YGEGLHQLSYVRGESRFSDHRPVYGRFGAEVVSTHGKMKKSMSCSRSRIEVEELLPYSGGYTELTFF
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR45666:SF28
20 546 527 0.0 –
PANTHER
PTHR45666
20 546 527 0.0 –
Gene3D
G3DSA:3.60.10.10
28 132 105 2.1E-16
IPR036691
SUPERFAMILY
SSF56219
31 126 96 3.02E-13
IPR036691
MobiDBLite
mobidb-lite
216 248 33 - –
SMART
SM00128
217 515 299 1.9E-41
IPR000300
Gene3D
G3DSA:3.60.10.10
264 534 271 6.0E-92
IPR036691
SUPERFAMILY
SSF56219
277 511 235 2.36E-57
IPR036691

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0046856
Biological process Phosphatidylinositol dephosphorylation The process of removing one or more phosphate groups from a phosphatidylinositol.
Subterm of

Genome browser

Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0311800.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

Loading expression data from ljgea-geneid. Please wait…