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TREX

The Transcript Explorer tool can be used to search for candidate Lotus genes using user-defined keywords, or to comb a specific genomic interval—a combination of chromosome and position range—for genes/transcripts of interest.

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  • IPR036691
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We have found 161 results. Now displaying 1 of 4 with 50 rows per page. This search has taken 5.693s to perform.

Transcript Name Description Chr Start End Strand Domain predictions GO predictions
n.a. LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0012000_LC LjG1.1_chr1 1492990 1497101 -
n.a. LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0015200_LC LjG1.1_chr1 1960853 1983039 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9Y0Y2|PURA_DROME Adenylosuccinate synthetase; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0083900_LC LjG1.1_chr1 12052832 12053302 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SYN1|PEN6_ARATH Seco-amyrin synthase; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0111900_LC LjG1.1_chr1 17433525 17434981 -
n.a. Calcium-binding endonuclease/exonuclease/phosphatase family; TAIR: AT5G54130.4 Calcium-binding endonuclease/exonuclease/phosphatase family; Swiss-Prot: sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270; TrEMBL-Plants: tr|A0A1J7GVC6|A0A1J7GVC6_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0127100 LjG1.1_chr1 20293072 20304165 -
n.a. LINE-1 reverse transcriptase like; TAIR: AT3G51740.1 inflorescence meristem receptor-like kinase 2; Swiss-Prot: sp|O83890|Y920_TREPA TPR repeat-containing protein TP_0920; TrEMBL-Plants: tr|A0A0B2RFW9|A0A0B2RFW9_GLYSO Uncharacterized protein; Found in the gene: LotjaGi1g1v0163200_LC LjG1.1_chr1 30684367 30684880 -
n.a. Retrovirus-related Pol polyprotein LINE-1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P08548|LIN1_NYCCO LINE-1 reverse transcriptase homolog; TrEMBL-Plants: tr|A0A151U6Y2|A0A151U6Y2_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0167300_LC LjG1.1_chr1 31806679 31809266 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P22098|TRPC_VIBPA Tryptophan biosynthesis protein TrpCF; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0200800_LC LjG1.1_chr1 42485457 42487393 +
n.a. Glucosamine-6-phosphate deaminase; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|A6T6C1|NAGB_KLEP7 Glucosamine-6-phosphate deaminase; TrEMBL-Plants: tr|A0A151S8Y9|A0A151S8Y9_CAJCA Retrovirus-related Pol polyprotein LINE-1; Found in the gene: LotjaGi1g1v0203100_LC LjG1.1_chr1 43598739 43603502 -
n.a. 1-deoxy-D-xylulose 5-phosphate synthase 1; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCF7|F4NCF7_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0206900_LC LjG1.1_chr1 45086350 45094135 -
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0228200_LC LjG1.1_chr1 52830968 52832873 -
n.a. DNA-(apurinic or apyrimidinic site) lyase; TAIR: AT3G48425.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q5XF07|APE1L_ARATH DNA-(apurinic or apyrimidinic site) lyase; TrEMBL-Plants: tr|I1JXF2|I1JXF2_SOYBN DNA-(apurinic or apyrimidinic site) lyase; Found in the gene: LotjaGi1g1v0231200 LjG1.1_chr1 54177619 54185018 +
n.a. Transposon TX1 uncharacterized; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P51173|APEA_DICDI DNA-(apurinic or apyrimidinic site) lyase; TrEMBL-Plants: tr|A0A151U069|A0A151U069_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0236800_LC LjG1.1_chr1 56396498 56397927 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G68740.1 EXS (ERD1/XPR1/SYG1) family protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A061GZ42|A0A061GZ42_THECC Uncharacterized protein; Found in the gene: LotjaGi1g1v0238700_LC LjG1.1_chr1 56837169 56839046 +
n.a. Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151R3M6|A0A151R3M6_CAJCA Putative ribonuclease H protein family; Found in the gene: LotjaGi1g1v0262600_LC LjG1.1_chr1 64252045 64253129 +
n.a. Transposon TX1 uncharacterized; TAIR: AT3G24255.7 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|A5BA98|A5BA98_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0263700_LC LjG1.1_chr1 64564994 64577402 -
n.a. Calcium-binding endonuclease/exonuclease/phosphatase family; TAIR: AT5G54130.2 Calcium-binding endonuclease/exonuclease/phosphatase family; Swiss-Prot: sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270; TrEMBL-Plants: tr|K7KUX2|K7KUX2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0301200 LjG1.1_chr1 73477118 73482110 -
n.a. Calcium-binding endonuclease/exonuclease/phosphatase family; TAIR: AT5G54130.2 Calcium-binding endonuclease/exonuclease/phosphatase family; Swiss-Prot: sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270; TrEMBL-Plants: tr|I1KB30|I1KB30_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0301200 LjG1.1_chr1 73477158 73482054 -
n.a. Calcium-binding endonuclease/exonuclease/phosphatase family; TAIR: AT5G54130.2 Calcium-binding endonuclease/exonuclease/phosphatase family; Swiss-Prot: sp|O81916|YC22_ARATH Uncharacterized calcium-binding protein At1g02270; TrEMBL-Plants: tr|K7KUX2|K7KUX2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0301200 LjG1.1_chr1 73477709 73481614 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|G5ECQ2|FRIZ2_CAEEL Frizzled-2; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0302600_LC LjG1.1_chr1 73778393 73786711 -
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A5CAA2|A5CAA2_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0310100_LC LjG1.1_chr1 75264986 75269843 +
n.a. Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0313700_LC LjG1.1_chr1 75856858 75859180 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G51460.1 ABC-2 type transporter family protein; Swiss-Prot: sp|Q42777|MCCA_SOYBN Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial; TrEMBL-Plants: tr|A0A1D5SYD6|A0A1D5SYD6_WHEAT Uncharacterized protein; Found in the gene: LotjaGi1g1v0328500_LC LjG1.1_chr1 78330173 78333195 -
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A5CAA2|A5CAA2_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi1g1v0344200_LC LjG1.1_chr1 80998453 81003086 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P0C7A6|BTBBB_DANRE Ankyrin repeat and BTB/POZ domain-containing protein BTBD11-B; TrEMBL-Plants: tr|A0A151QR03|A0A151QR03_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0443100_LC LjG1.1_chr1 94034764 94039250 -
n.a. Transposon TX1 uncharacterized; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P05008|IFNAB_BOVIN Interferon alpha-B; TrEMBL-Plants: tr|A0A151U069|A0A151U069_CAJCA Uncharacterized protein; Found in the gene: LotjaGi1g1v0513300_LC LjG1.1_chr1 103537358 103538028 -
n.a. LINE-1 reverse transcriptase like; TAIR: ATMG00310.1 RNA-directed DNA polymerase (reverse transcriptase)-related family protein (ChrM); Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0570500_LC LjG1.1_chr1 110403053 110409094 -
n.a. Transposon TX1 uncharacterized; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8XE35|YFAS_ECO57 UPF0192 protein YfaS; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0621800_LC LjG1.1_chr1 116912291 116916166 +
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|O00370|LORF2_HUMAN LINE-1 retrotransposable element ORF2 protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0627300_LC LjG1.1_chr1 117647751 117651694 +
n.a. Endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|P27695|APEX1_HUMAN DNA-(apurinic or apyrimidinic site) lyase; TrEMBL-Plants: tr|A0A061DW40|A0A061DW40_THECC Uncharacterized protein; Found in the gene: LotjaGi1g1v0664400 LjG1.1_chr1 122627622 122632871 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G37440.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q0WT19|IP5P8_ARATH Type I inositol polyphosphate 5-phosphatase 8; TrEMBL-Plants: tr|K7KFP0|K7KFP0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0697900 LjG1.1_chr1 126578653 126586437 +
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G37440.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q0WT19|IP5P8_ARATH Type I inositol polyphosphate 5-phosphatase 8; TrEMBL-Plants: tr|K7KFP0|K7KFP0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0697900 LjG1.1_chr1 126579384 126583863 +
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131705857 131712995 -
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|V7CXW0|V7CXW0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58560.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q8W0Z9|CCR4A_ARATH Carbon catabolite repressor protein 4 homolog 1; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|V7CXW0|V7CXW0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707283 131712481 -
n.a. Carbon catabolite repressor 4-like protein; TAIR: AT3G58580.1 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9M2F8|CCR4B_ARATH Carbon catabolite repressor protein 4 homolog 2; TrEMBL-Plants: tr|I1JQF1|I1JQF1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0743500 LjG1.1_chr1 131707296 131712481 -
n.a. LINE-1 reverse transcriptase like; TAIR: AT3G24255.4 RNA-directed DNA polymerase (reverse transcriptase)-related family protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi1g1v0781300_LC LjG1.1_chr1 135410763 135416918 +
n.a. LINE-1 reverse transcriptase like; TAIR: AT4G29090.1 Ribonuclease H-like superfamily protein; Swiss-Prot: sp|P0C2F6|RNHX1_ARATH Putative ribonuclease H protein At1g65750; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0003500_LC LjG1.1_chr2 1478582 1482824 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT2G37900.1 Major facilitator superfamily protein; Swiss-Prot: sp|A5FDF9|HEM12_FLAJ1 Glutamyl-tRNA reductase 2; TrEMBL-Plants: tr|F4NCI4|F4NCI4_BETVU Uncharacterized protein; Found in the gene: LotjaGi2g1v0017500_LC LjG1.1_chr2 5997898 6005811 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G01900.3 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9; TrEMBL-Plants: tr|G7IBG6|G7IBG6_MEDTR Type I inositol-1,4,5-trisphosphate 5-phosphatase; Found in the gene: LotjaGi2g1v0024400 LjG1.1_chr2 8469959 8475213 -
n.a. Type I inositol-1,4,5-trisphosphate 5-phosphatase; TAIR: AT2G01900.3 DNAse I-like superfamily protein; Swiss-Prot: sp|Q9SIS4|IP5P9_ARATH Type IV inositol polyphosphate 5-phosphatase 9; TrEMBL-Plants: tr|G7IBG6|G7IBG6_MEDTR Type I inositol-1,4,5-trisphosphate 5-phosphatase; Found in the gene: LotjaGi2g1v0024400 LjG1.1_chr2 8469959 8475213 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A5CA21|A5CA21_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0066000_LC LjG1.1_chr2 15479794 15484495 +
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT1G40390.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A5CA21|A5CA21_VITVI Putative uncharacterized protein; Found in the gene: LotjaGi2g1v0073200_LC LjG1.1_chr2 18765703 18770625 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT4G36050.2 endonuclease/exonuclease/phosphatase family protein; Swiss-Prot: sp|P37454|EXOA_BACSU Exodeoxyribonuclease; TrEMBL-Plants: tr|A0A0B2RQP7|A0A0B2RQP7_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0080500_LC LjG1.1_chr2 21432687 21441594 +
n.a. LINE-1 reverse transcriptase like; TAIR: AT1G43760.1 DNAse I-like superfamily protein; Swiss-Prot: sp|P14381|YTX2_XENLA Transposon TX1 uncharacterized 149 kDa protein; TrEMBL-Plants: tr|A0A151RYW3|A0A151RYW3_CAJCA Transposon TX1 uncharacterized; Found in the gene: LotjaGi2g1v0087300_LC LjG1.1_chr2 25381219 25387112 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT5G05520.1 Outer membrane OMP85 family protein; Swiss-Prot: sp|P37454|EXOA_BACSU Exodeoxyribonuclease; TrEMBL-Plants: tr|A0A0B2PJ66|A0A0B2PJ66_GLYSO Uncharacterized protein; Found in the gene: LotjaGi2g1v0087300_LC LjG1.1_chr2 25381219 25387112 -
n.a. Endonuclease/exonuclease/phosphatase family protein; TAIR: AT2G41460.1 apurinic endonuclease-redox protein; Swiss-Prot: sp|Q73GP1|PYRB_WOLPM Aspartate carbamoyltransferase; TrEMBL-Plants: tr|A0A072VJ84|A0A072VJ84_MEDTR Endonuclease/exonuclease/phosphatase family protein; Found in the gene: LotjaGi2g1v0107400_LC LjG1.1_chr2 36589604 36594142 +