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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0314600 |
| Transcript ID | LotjaGi5g1v0314600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Polyamine aminopropyltransferase; TAIR: AT5G19530.1 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; Swiss-Prot: sp|Q9S7X6|ACL5_ARATH Thermospermine synthase ACAULIS5; TrEMBL-Plants: tr|I3S1F7|I3S1F7_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0314600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63278791..63281288) extracted from Lotus japonicus Gifu genome v1.2.
ATGGGTGAGGTAGCTTTCTCAAATGGAATTAGCAATGGCAGTGTTAATAATGGAGTCAATGGCCAAAGCCATTCCCTGAA TGGTTATAGGAAGAGTTGCTGGTATGAAGAAGAGATTGAAGAGGACTTAAGATGGTGCTTTGCTCTCAATAGGTACATTA CTTATATCTAGATATATATAGTTTTTATGTTCTTTAGGCAACCCAAAGTATCATATCTGATATAATATCTAGTTGTAATG TAGTAACACATTACTACCATCTTGCGTAAATTTCCAAATAAAATAGTTTCCTCTGTCAGATCGTTCAAATTTATGTTCTG CATAATTAGTTCTCCATGTTGATTTTATAATCAATTATTATTTCTTTTAGAAGATTCAAGAATAAAGGCACAAAACAAGA AGGTAAAAGGTGAAAGAAGCAAGTGCTTTTGAGTGAGACAAAAATACAGCACTAGTTGTCTAGTTTTGTTGGCAGATCAC GGCCAATTTGGCGATTTCAGCTTCTCATGCTGGGAAAAAGTAAAGGGATACTAAAAAGTCATGAACTCTTTTTGCCTGTG GCCATAAAAAAGGCAGACAACATATAACCAAAATGAAAATAAGACTATAGCTTTGTCCAACAATGTCATCTGGTTTATTG ATGTAGATAGTGTACTATTAGAACACAAACTTTATACATCTGAATTTTTTAATACTGTTGGCAGCATTTTTCAAGTGAGA AAAATAGCTTTGAATGAAACTTGTACGTATCATTCATATATATCGTTTATCCTTTCTTTTCCTTTACTATCTTTGGTATG GTTGCAGTATATTGCACACAGGAGCTAGCCAGTACCAGGACATTGCATTGTTGGATACAAAGCCCTTTGGAAAGGTGCAC ATGTTCTGCAATTAGTGCTTATACAACAGATAGTAGTTATCTTTGCTTATCTGGAAGCTAAATTAAACTAGCCTCTTACC TGTTATTTTCTTGTGTCCTCTTGCAGGCTTTGGTAATTGATGGAAAGCTTCAGAGTGCAGAGACAGATGAATTTATCTAC CATGAATGTCTTGTTCATCCAGCTCTGCTTCACCATCCTAAGTACTACCTCCTTTACTCTTTAAAGATTAAAGATCTTAT GAGATATACATAGCATTTTAAAATTTGTTTCAATCATGTTTTGTGTGCCATGTTATAGCCCAAAGAATGTTTTTATTATG GGAGGAGGAGAAGGGTCTACTGCAAGGGAATTACTCAGGCATAAGACCATAGACAAAGTTCTAATGTGTGACATAGATGA GGTGAAATTTCCTATGTACAAAGTTAGCTCTTAATTGTACATTTATATATACCATGGAATAATCTGATTAAAATCTCTGT CTCTGTGCTTGCTGGAGCAGGAGGTGGTGAACTTCTGCAAATCATACTTAGTTGTGAACAAGGAAGCATTCTGTGATCTG AGACTTGAAGTCATCATCAATGATGCCAGGTTTGATAATCGTATAATATCCTGTTCTTGCTGGATCATAGTGTTCATTAT CTTTGCCACCAAGTTCCAATTATTATGTGTCATGTTGCAGGAGTGAGCTAGAAGCCAGAGAGGAAAACTATGATGTGATA GTTGGTGACTTAGCAGACCCAATTGATGGTGGCCCTTGCTATAAACTGTACACCAAGTCCTTCTATGAGTTCACTGTTAA GCCTAAACTGAAGCAGGGTGGCATCTTTGTCACACAGGTATATGGGTACTAGGAGTCTAGGACCATTGTCTATATGTATC AAATACTTAGAAAATGAAACATAAATTAACTTACCCATGTTTTGTTACTATGTTAAGGCTGGGCCAGCTGGAATATTTAG CCACAAAGAAGTATTCTCTTGTATCTACAACACCTTGAGACAAGTTTTCAAGTGTAAGTGATCTTCCAAGGGAAAAGAGA ACATTTATGTGATGCTCTCTATCTAGATATCTGAATACATCAAATTAACATTTTGCTTTTGTTTGCAGATGTTGTGCCTT ATTCAGCTCATATCCCATCCTATGCTGATATCTGGGGATGGGTCATGGTAAATATAACTTAAAATAAATTTCAAGTTGTT TTGTATTATTTGTTTTGTATGCTATATAGTCTGTCCTTAGAAAATACCCCAAGTATAAAAAAACAGTTGTTCAACTATTG GAAAGATCTTAATAAGACTTTTTTTGTCTCTTGGAATATAATAGGCTTCAGATTCTCCAATAGACCTTAGTGCAGAAGAG CTAGACCTCAGAATGAAGCAGAGAATTCTGGGGGAAAATAGATATCTAGATGGAAAAACATTCTCATCATCCTCAACTTT GAGCAAAACTGTTCGCAATTCGTAAGCGAAAATCGCACTTATCCTCTTATATTTGTTCCCGTGCAACATTCTGTTCTTGA CACACTTTTGACACTTTTATAACAGGCTAGACAATGAAACTCATGTGTACACTGAGGAAGCTGCCAGGTTCATACACGGG CATGGCAAGCATGCATGA
CDS sequence (LotjaGi5g1v0314600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTGAGGTAGCTTTCTCAAATGGAATTAGCAATGGCAGTGTTAATAATGGAGTCAATGGCCAAAGCCATTCCCTGAA TGGTTATAGGAAGAGTTGCTGGTATGAAGAAGAGATTGAAGAGGACTTAAGATGGTGCTTTGCTCTCAATAGTATATTGC ACACAGGAGCTAGCCAGTACCAGGACATTGCATTGTTGGATACAAAGCCCTTTGGAAAGGCTTTGGTAATTGATGGAAAG CTTCAGAGTGCAGAGACAGATGAATTTATCTACCATGAATGTCTTGTTCATCCAGCTCTGCTTCACCATCCTAACCCAAA GAATGTTTTTATTATGGGAGGAGGAGAAGGGTCTACTGCAAGGGAATTACTCAGGCATAAGACCATAGACAAAGTTCTAA TGTGTGACATAGATGAGGAGGTGGTGAACTTCTGCAAATCATACTTAGTTGTGAACAAGGAAGCATTCTGTGATCTGAGA CTTGAAGTCATCATCAATGATGCCAGGAGTGAGCTAGAAGCCAGAGAGGAAAACTATGATGTGATAGTTGGTGACTTAGC AGACCCAATTGATGGTGGCCCTTGCTATAAACTGTACACCAAGTCCTTCTATGAGTTCACTGTTAAGCCTAAACTGAAGC AGGGTGGCATCTTTGTCACACAGGCTGGGCCAGCTGGAATATTTAGCCACAAAGAAGTATTCTCTTGTATCTACAACACC TTGAGACAAGTTTTCAAGTATGTTGTGCCTTATTCAGCTCATATCCCATCCTATGCTGATATCTGGGGATGGGTCATGGC TTCAGATTCTCCAATAGACCTTAGTGCAGAAGAGCTAGACCTCAGAATGAAGCAGAGAATTCTGGGGGAAAATAGATATC TAGATGGAAAAACATTCTCATCATCCTCAACTTTGAGCAAAACTGTTCGCAATTCGCTAGACAATGAAACTCATGTGTAC ACTGAGGAAGCTGCCAGGTTCATACACGGGCATGGCAAGCATGCATGA
Protein sequence (LotjaGi5g1v0314600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGEVAFSNGISNGSVNNGVNGQSHSLNGYRKSCWYEEEIEEDLRWCFALNSILHTGASQYQDIALLDTKPFGKALVIDGK LQSAETDEFIYHECLVHPALLHHPNPKNVFIMGGGEGSTARELLRHKTIDKVLMCDIDEEVVNFCKSYLVVNKEAFCDLR LEVIINDARSELEAREENYDVIVGDLADPIDGGPCYKLYTKSFYEFTVKPKLKQGGIFVTQAGPAGIFSHKEVFSCIYNT LRQVFKYVVPYSAHIPSYADIWGWVMASDSPIDLSAEELDLRMKQRILGENRYLDGKTFSSSSTLSKTVRNSLDNETHVY TEEAARFIHGHGKHA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 13 | 85 | 73 | 2.1E-14 | ||
| PANTHER | 18 | 333 | 316 | 3.8E-171 | – | |
| PANTHER | 18 | 333 | 316 | 3.8E-171 | – | |
| ProSiteProfiles | 32 | 269 | 238 | 93.292 | ||
| SUPERFAMILY | 32 | 314 | 283 | 4.66E-69 | ||
| Hamap | 33 | 314 | 282 | 30.369 | ||
| Pfam | 34 | 85 | 52 | 7.0E-13 | ||
| Gene3D | 86 | 335 | 250 | 3.7E-72 | – | |
| Pfam | 88 | 266 | 179 | 1.3E-40 | – | |
| CDD | 113 | 221 | 109 | 2.4741E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. |
Expression pattern of LotjaGi5g1v0314600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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