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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0319100 |
| Transcript ID | LotjaGi5g1v0319100.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transmembrane protein, putative; TAIR: AT4G33740.1 myb-like protein X; TrEMBL-Plants: tr|A0A1J7FSX1|A0A1J7FSX1_LUPAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0319100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63655444..63663123) extracted from Lotus japonicus Gifu genome v1.2.
GCTAGTTGTAAACTATGTAGAAAGTCAAAGAGTATGATTATCTACAATTTATGTTGAGTTCAATGAGAATCTAAATTGTT ACTGAAAAACTGAAAATTTTTCAACGCTAACAGTTATCAATAATTATCATAACTGGAATCCAGAAACCAGACAAGGATGC TGGGGTCGGTTACAGTACACTCCTTGTCAATTTGTTTGTCATGGTCAAGGCATGTTACTTGTTTTAGATCGCATCCACTA ACTCTGCAAACTGCAAAGCAAAATAAACTTGTACAACTATCCTTAAATGTGTCTACTTTTGTCGTTCTTTTTCCAACTGC TTCTTACTACTTCTTGTGACTTGTGACTGCTTCCTTCCTTCTTCTCTGTTTGCTCATTCAGGTAAATTCCTATCCTCTCT CCTACTCACTTGCTTCTTTCCTTTTCCTTTTCCTTTCCTGTAGTTTTGAAATAACAAGGGTATGTATGCTCAATCTCTCT TCATCATTCATTCAACCTTTCTTCTTGCTGTGAAATTGCTATTTTTTCAATAGTCAAAACCCTCTATCTGTTTGCATCTT TCATTTTTGCTTCAAATTGATTGGGACCCTTCAAGCATGCTTTTAATGAAGAATGGTGTTTCAGTGGCAAAGTCAAAATA TGGGCTTGTATTGTTTGTACCTGTTCTTTACTGATTGATCTGTGGTGGACTTTTCTTATCTGAAATTTGTGCTTGATGGT TGTAGATGGGGGGTTGTAGGAATTGCTTGTGGTTTCTTCTGTGTGCCTTATTTACACTTTGTTACTTTCTTTGATTGTTT TACTGAAAGCCCATAGTCACTGGGTTTCCTTTTTGACTTGCCAATTATATGGATTTTTGTGGTGAAAGTGTAGAGCACTA GAGCATAATACCCGAATGAGCAATTATATTGTTTTTCTGATTTGATTTTCCCAGTTTGTTTGATTGACAGTTTCAGTTGC CGAGGACGTTGAGAATTAAAGTTGAAACCTTTTGTTGTTTAACATGGATCAGTGAAAAACTATTTTCTGTAATTGGAAAG GAATAAAGGATACTTAGAAAGAGTACCTTAATTAAATGTCTGCTATACCCGCAATTTCTTTCGATATAATTGCTTTTTCA GTGAACTGTTACTGTTTAGAGCTTTCACTTCTAGTCCCAGTGGAGAAATAAATTTTGGAGTGGAGCTTAAATATTTTCCC CTTTTATAGTCTTTTTGTTTTTCATTTCTAGATGCAAAACTAAGGGTATTTTAAGCTTGGTGTAAATCTTTCCTTTTGAT TATACCTTTACATTGATGATGATACCTTCCTGAGATCTTTATTAATGCATTTCCAATCCAAAGCAGGTGGCCTGCCCTTG CTATTAGGAGAAGATAAAGCAGGGGTTTTCGAGTAAGTTAAGCATGATAAAGCGGTTTCCAAATAGGAACCCTAGGTCCA AAGGCATCAAGGTAAAACATATTCTGCAAATTGTTCTGTTGCTTGGTATTTGCTTCTGGTTGATCTATCAGGTTAAGCAC AATCGTGGTAGGAAAAAGGAATTTGATGAGAATGATGCAAAACTGTCAGTCAGAACTCATCAGACAGATCAAATTGTGAA ACTTGGTAGAAAAGACCTTCATCCGGGTAAGGATGAATTAAATCAGAATGAAAAGCATGAGGAGGATGAGGAAGATGAAC ATGTTGTAGAGGATGAAGAGAACAAACATGAACATGATGAACAAGAAGAAGAGGGAATCAGGCTTGAAACTGAAGAAAGC AAAGACGACAAGCATGAAGGGAGAGAACAAGAGGAAGAAGAAAATAAGCATGGAGCAGAAGTGCTAGAGGAAGAAAATCA ACATGAACATGATGAACACGAACAAGAGGAAGAAAGAAACCAGCATGAAACAGAAGAAAGCAAAGACAACAACCATGAAG GGGGAGAACAAGAGGAAGAAGAAAATAAGCATGGAGCAGAAGAACTGAAGGAAGATGATAACAAAAGTGAGGAGATGGAA GATGCAGGAAAAGGAGGAGGAGGGGGAGATGATGATGAGATAGATGAAAATGATCAAGAGAAACCAGAGGTGGATATGGA TCGTGATGATGGGAAAGATAAGGAAGAAGAGGGTGACGCAAAGGAGAATGAAGACAGCGAGGATGAGGAAAAGGGGGGTT CAGCGGAAAACCACGGAAATCATATGGCACGCGAGGAGCATTACAAGGGGGATGATGCCTCTAGTGCAGTGGCTCATGAT ACTCATGCAACTAGCACTGAAAATGAAACATTTAGCATGGAAAACTCTGATCTAAACATAGAAACAAATATTACAAAACC AGAAAATGAGACGGCTTATTCAGATGAAAGCAACCAGAATCGAAATGATTCAAATTTGAATGTTATAGAAGGGGAAGGGG TAGACAGGATTTCTTCAAATGCAAGTTCTGATAAAGAGACTGGAAATGATAATTTGTTCAACTCTGTGGATATCTCATAT CTGAATAAAACATTCAAAACAAGCAGTAACTTGATAGAAGATGATGCAAACACTTCAATTTCATCCGAACACAATAAAAC AGTTGATACGACAATGATCACTGGAGATATAAAAAATTTGCAAACAGAGGGATCACAGCAGAGTGGCAATGGAATTTCTG AAGAAAACCTGCCTGATACTGATTCAACGGTCGCTGTTAAAACTGAAAATGGAGGTCCAGCTGCAAGAGAATCTTCTAAT CAAAGGGATGGTGAATCAGAGAAGGTAATCGGATTTGTAGCTTCAAATGAAACTGAGAACTCTTCTTCGAATTTGGATAG AAATGAGAGCTCTGGTACCACTGAAAGTGATGAGTCCAATGGTAGTAACGAATCAAATGAATCTCAGAATACTGATGCCA CTGAGGATGAGACATTCAAGGGTGATACTTCAATGGGTGGAACTGATGAAACATCAGGCTCTTTCTCTGCTGACGAAATT CTGGATTCAGTTGAACATGATGCCATCGATTCTTTTGATACTCATATCCAGGACCACAGGGATGTGAGCGAGGTTCGAAC TGATCTCGATACATTGCCAGATATTAGAAATGAAGGATATAATGGTGATGAAACTGCAGCAGAGTAAACTTAAATTGGAT CCACCTAGTTGTTAGAACATCTTTGCTTTACCAAGAAATGTGTGAAGACAAAGATCTTCAGAAAGGTACAAACATTGTTG TGGATATTTTTGTGATTATATCAGTCTGGATATGTATAATTTATTTCTACATTCCACTATCCACTGCTACTGTTTCTCTC TCACTCTCTCTCTCTTTTCCAGAAGTGTGAGCAACACACTTTTTTAACACACTCTTCCAGGCATTTGATATGATTGATTT ATTTTTTAAATATCAATACATGCTTAGTATGGTTAGTTATCTATACCTTTTTAAATTTAAAATGGAAAAGAACTGTCACT TAACACTACTTCTGTAAAAGAAGAGTACTGAATACCCAGTTCCTTGGATAGACACCATCTGGGTATGACTTGAAAATATA TAATTATGGTAAAGACAAGACAATGCTAAGCATTGGCCATTAAGTTAGATAATTTATTAGTGATTAAGAATAAATTTGAA GGCATCATTATAAAGCATACAATCAGAAGAGATTAATCATTTTCTGGAAGCTACTGATAGCAATTCTGGTCATTTGAGCT GTCAAAACCCAAGTTTAAAACAATAATGTGTTGTTAAGGTGACTAAAAAGATCTATAAATGGTTTCCAGTAACAAATTGA CTGGTAGTTTCTAACTTGATTGATACAAAATAAATGCAACAAGCTAGAAATCAAATTTTGAACACCTGTAGAGATAAAAT TGGTGTGGAAAGAACACCAAGTGGCACTACTAGAAGAATAGCAAACCATATCATACACTTTAAGACATATTAAATGTCAT ATTACAGTCTTTGTCTAAGTGTAAACAAATAGGCTTCATGGAATTGTGATTTAAACATTGATGGTAAGTTATTATATCAC CCCTATGACTAGAATCTAACAAGCGGATAACTCAGTGATTGAAACCTCGTTTACAGATTCTCGAGTTGATTTACTCGTGG ATTCACTTGATCTTGTTGCCCTTGAATCATCTTCCAACAATTGCATGTCTTAAAGGCTTCTATGTATTGTCCATGAAAAG TGCAGGTTGGTAAGGTACTGAGAGACTAAGAGAGTAACTATTAAACATGAGTGATAATGTAAACCAATGTGGATGAGTAA TAAGGTTTGGTCTATTAGCTGAATTTCGTGGACGGAGAAGGGGTTAAACCACAACAGCGTCATCTAATATGGTGGTTTCA TTGAAGAAACGGTAGGGATCAAATCTAAGTCGACAACTGGGTTTAAGAATATTTCCCCCCATCCTACCCTCACAACATGA TGGGATTTCAGAGATAGCGATCTCCAAGCAGTCATTGCATTGAACCCCAGTCAAATCAGCCATACACTGCACAAGGCCAT ACAAGGTCGTATAACCTGTGGTCACCTTATCTGAGGCGTACTTGCGACGAGAGTCACCGGATGCAGCTTTGTCTTTCAGA TTTCTCATCAAGTTACTCAGTACCTGTTAAACAGAGAAAAATGAAGTTCATTATTATTTTTTTGGACTATGATGAGTTTC GCCATTGGATAAACTGTGACACTCTCTCTCAATAAATGACAGGATTCCAAAATCTAGCTTGCCTACTGCTAGACAACCCA TTGATTGTTTAGTTAATTGTATATACACAGTGATAAAAAACTCACTGTAATGTAACTAACTCACCATTCTCTAACAGAAT CTGCTAACCTCTGCCTGAATTAAGAACAAATAACAAACTCTAATAGTTACCTGATCAAACTCATTCACCGACCCAGTTAC ATTTCTTAGGTAGATCAAGTATATAGTAGGTTGAGTTTCCATGATGCCAAATATTGAGCGGTTGGAGTACCAGACGCCAC AGTCTCCAGTCCACACAATTGCTTCTTTTTGGTTTGGACACTGCTTTTTGAGATAGAATGCAGAATCCTTAAGTCGTCTT CGGCAATCATCTGGCTCTAGATCTCCTCTGCACAACCCGACCGCGTACACTTTGTCTGCGTTTTGGCCGTGTGAGAGATT GTAGAAACCATAGTTAACTTCTGTGTGTGTAGAGAAACTGGATAAAACAGTGTTGAGGTTGTTGTCATAGGTGCTGTTGG TTGTGTAGTTGCCTCTTCCGTTATCACAGTTAACAGGATCCTGGGCGCTAACTAATTGCAGTGGTACCATTATGGCAAAG AGACAGCAGCAAAGAGAGGAAAACAGCCTATAAAACGTTGCAGGCATTGTTCTCTACTAGCAACAAGCCCAAGAGTGAAG CTTTAGCTATGAAGGAACATTAACTCTTCTTGTGGAAAGGCGAAGTAGTTGACTGAGTAAAAGCTCTTACTTTTCGTTGG GAGAAATTTCATACGTATTAGGTAAGGCATTTGACGGGCACTAACGCTATGCTTGAGTATTCGTTATCACATTAAGACGT TAACTAGGGGTCCTTTTAGGATAGACCATTAGTATAGGGGTCCTATTAGGATGGACCATTAGTATTTTAATCGACCAGGG CACCATTCATTAAACAACATTCGGTCATATATAGTGAGAGAAATGATCTTCTAACGTCCAAACTACTAGTATAGGACGCC AGTGACATGCTGAGGAGATGGATGGACAGAGACTCAAGTTATCCACCAACTGAAATTTTAGTGGATGCATACGGATTCGA ACCGTTGACCTATAGGAATGTGGGAGGTAAATCCGGAATCTGTGCTCAGCTGTGTCAATTCAAGTTGGCAGTTCCCACTT CCCAAGTATTATTGATCACATGACTTTAATTTTAATTGAAAAAAGGTCTTATTCTTCCTTTTGTTGTATATAGGAATTTT TCAAGGAAATATTAAGGATGGAAGCATTGTGAACCGTGTAGGATGGGAAAAAAATTTGTGGATCTCATGTGTTAAAACTT GAGGTTCTCATAGCATAAAAGTTGATGTAAGACCAGAAGAGATGAGCCGTTGACTTGGAAAATATTGGATAGATACTCAA TCAGTGTTTGGGTATGTGTTCTCCCATGTATCTCACTCAGAAATGTTAGGTTCTTTTTTCTTATAATTTCAATTCCACCA ATGTTGATAGATTTTTGAATCCCCCATTTCAATTGCCTCATCAGAGCTAATTTAGGGTTTCAATTTTGTATTTTTGGATT CCTCTGGAAAAAGCATCTGTTGACTTATCACTAGGTATATTATCGATTTAACAAATTAGAAAACATTTAAGTTGGTGATT AGAAAGATCAATAAATGGTTTCCAGTAACAAATTGCAAGGTAGTTCCAAACCTGCATTGATACAAAATAAATGCAACATG CCAGAAACCAAATTTTGAACACCAATAGAGTTAAAATTGGTGTCAAAAGAACACAAAGTGGCACTGCTAGAAGAATAGCA AACCATACACTTTAAAACACTAAATGTTGTATTACAGTTTTTGTCTAATTGTAAACAAATAGGATTCATAGAATTGTGAT CAAAACATTGATGATAAATTATTATATCAGCCCAATGTCTAGCGAGCGGATAGCTCAGTGATTGAAGCCTCGTTTACAGA TTCTCGAACTGATTTACTCGTGGATTCAGTTGATCTAGTTGCCCTTGAATCATCTTCCGACAACTGCATGGCTAGAAGGC TTTCAGTTGTATTCTCCATGAAAAATGCAGGTTTGGAAGGTACTGGGAGAGAAAGAGAATAGCTATTAAGCATGAGTGCA ACAGAAGCCATGTTTGGTCTATCAGCTAAATTTTCTTGAACACAGAGTAAGCCAATGTGGATGCATCTTATGATTTCATC TGCTGAAATGCTGTTTAATGATGGATCTATTACATTTGTAGCTGTCCCCTCCCTCCAGTTTCTCCATGCCTGTAACAATT TGCTCAATTTCAGATAACCAGATACTATTTATTAGGCCTTCTATTCAATTTCTACCATAATGTGGGAACACATAATCTTC TTATTACTTTTAATGGCCAGAAAGAAATAATAGTGAGAAAGATAAGACTTACAAAGCTCAGTAGATACTCCGCATTCTCC CCCTGATGAATGGCATTATTGTTTTTTAGGCCACTTACAATTTCAAGAACCAGAACTCCAAAACTGAAGACATCTGATTT CACTGAAAAATGTCCATGCATTGCATACTCTGGTGCCATATATCCACTGGATGCCAATATGAACAAGCTTAATTAGTAAA GAATATTAGAATTCAGGCTCTGGTCCTAACTCTACCCAAAAACTAGTTCAGAGGTGACTAATAACGTAAAAAATTTAACT GAATTCAAATCAAGCACTTACAACAATTAGCAAAGTCGAGTATATTGTAATACTTACTAGGTTCCAACAATTCTCTTTGT ATTTCCTTGAGTTTGATCCACAACAAACAATCTTGCCATTCCAAAATCTGCTATCTTAGGATTCATCTCTTCATCTAAGA GAATATTGCTTGCTTTTAGATCACGATGTATTATGCGCAGTCGAGAATCTTCATGAAGGTAAACAAGGCCTCGAGCAATA CCCTTGATGATGTTGAAGCGCATTTCCCCATCCAGTTGTGCTTTCCTAAGAGGATCTACATACACAACAAAGCCAAATGA
CDS sequence (LotjaGi5g1v0319100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATAAAGCGGTTTCCAAATAGGAACCCTAGGTCCAAAGGCATCAAGGTAAAACATATTCTGCAAATTGTTCTGTTGCT TGGTATTTGCTTCTGGTTGATCTATCAGGTTAAGCACAATCGTGGTAGGAAAAAGGAATTTGATGAGAATGATGCAAAAC TGTCAGTCAGAACTCATCAGACAGATCAAATTGTGAAACTTGGTAGAAAAGACCTTCATCCGGGTAAGGATGAATTAAAT CAGAATGAAAAGCATGAGGAGGATGAGGAAGATGAACATGTTGTAGAGGATGAAGAGAACAAACATGAACATGATGAACA AGAAGAAGAGGGAATCAGGCTTGAAACTGAAGAAAGCAAAGACGACAAGCATGAAGGGAGAGAACAAGAGGAAGAAGAAA ATAAGCATGGAGCAGAAGTGCTAGAGGAAGAAAATCAACATGAACATGATGAACACGAACAAGAGGAAGAAAGAAACCAG CATGAAACAGAAGAAAGCAAAGACAACAACCATGAAGGGGGAGAACAAGAGGAAGAAGAAAATAAGCATGGAGCAGAAGA ACTGAAGGAAGATGATAACAAAAGTGAGGAGATGGAAGATGCAGGAAAAGGAGGAGGAGGGGGAGATGATGATGAGATAG ATGAAAATGATCAAGAGAAACCAGAGGTGGATATGGATCGTGATGATGGGAAAGATAAGGAAGAAGAGGGTGACGCAAAG GAGAATGAAGACAGCGAGGATGAGGAAAAGGGGGGTTCAGCGGAAAACCACGGAAATCATATGGCACGCGAGGAGCATTA CAAGGGGGATGATGCCTCTAGTGCAGTGGCTCATGATACTCATGCAACTAGCACTGAAAATGAAACATTTAGCATGGAAA ACTCTGATCTAAACATAGAAACAAATATTACAAAACCAGAAAATGAGACGGCTTATTCAGATGAAAGCAACCAGAATCGA AATGATTCAAATTTGAATGTTATAGAAGGGGAAGGGGTAGACAGGATTTCTTCAAATGCAAGTTCTGATAAAGAGACTGG AAATGATAATTTGTTCAACTCTGTGGATATCTCATATCTGAATAAAACATTCAAAACAAGCAGTAACTTGATAGAAGATG ATGCAAACACTTCAATTTCATCCGAACACAATAAAACAGTTGATACGACAATGATCACTGGAGATATAAAAAATTTGCAA ACAGAGGGATCACAGCAGAGTGGCAATGGAATTTCTGAAGAAAACCTGCCTGATACTGATTCAACGGTCGCTGTTAAAAC TGAAAATGGAGGTCCAGCTGCAAGAGAATCTTCTAATCAAAGGGATGGTGAATCAGAGAAGGTAATCGGATTTGTAGCTT CAAATGAAACTGAGAACTCTTCTTCGAATTTGGATAGAAATGAGAGCTCTGGTACCACTGAAAGTGATGAGTCCAATGGT AGTAACGAATCAAATGAATCTCAGAATACTGATGCCACTGAGGATGAGACATTCAAGGGTGATACTTCAATGGGTGGAAC TGATGAAACATCAGGCTCTTTCTCTGCTGACGAAATTCTGGATTCAGTTGAACATGATGCCATCGATTCTTTTGATACTC ATATCCAGGACCACAGGGATGTGAGCGAGGTTCGAACTGATCTCGATACATTGCCAGATATTAGAAATGAAGGATATAAT GGTGATGAAACTGCAGCAGAGTAA
Protein sequence (LotjaGi5g1v0319100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MIKRFPNRNPRSKGIKVKHILQIVLLLGICFWLIYQVKHNRGRKKEFDENDAKLSVRTHQTDQIVKLGRKDLHPGKDELN QNEKHEEDEEDEHVVEDEENKHEHDEQEEEGIRLETEESKDDKHEGREQEEEENKHGAEVLEEENQHEHDEHEQEEERNQ HETEESKDNNHEGGEQEEEENKHGAEELKEDDNKSEEMEDAGKGGGGGDDDEIDENDQEKPEVDMDRDDGKDKEEEGDAK ENEDSEDEEKGGSAENHGNHMAREEHYKGDDASSAVAHDTHATSTENETFSMENSDLNIETNITKPENETAYSDESNQNR NDSNLNVIEGEGVDRISSNASSDKETGNDNLFNSVDISYLNKTFKTSSNLIEDDANTSISSEHNKTVDTTMITGDIKNLQ TEGSQQSGNGISEENLPDTDSTVAVKTENGGPAARESSNQRDGESEKVIGFVASNETENSSSNLDRNESSGTTESDESNG SNESNESQNTDATEDETFKGDTSMGGTDETSGSFSADEILDSVEHDAIDSFDTHIQDHRDVSEVRTDLDTLPDIRNEGYN GDETAAE
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 150 | 150 | 2.2E-182 | – | |
| Phobius | 1 | 19 | 19 | - | – | |
| PANTHER | 1 | 150 | 150 | 2.2E-182 | – | |
| TMHMM | 20 | 37 | 18 | - | – | |
| Phobius | 20 | 37 | 18 | - | – | |
| Phobius | 38 | 567 | 530 | - | – | |
| MobiDBLite | 66 | 353 | 288 | - | – | |
| MobiDBLite | 66 | 88 | 23 | - | – | |
| MobiDBLite | 97 | 209 | 113 | - | – | |
| Coils | 138 | 164 | 27 | - | – | |
| PANTHER | 143 | 369 | 227 | 2.2E-182 | – | |
| PANTHER | 143 | 369 | 227 | 2.2E-182 | – | |
| MobiDBLite | 223 | 238 | 16 | - | – | |
| MobiDBLite | 246 | 275 | 30 | - | – | |
| MobiDBLite | 277 | 326 | 50 | - | – | |
| MobiDBLite | 335 | 353 | 19 | - | – | |
| MobiDBLite | 366 | 438 | 73 | - | – | |
| MobiDBLite | 366 | 567 | 202 | - | – | |
| PANTHER | 383 | 567 | 185 | 2.2E-182 | – | |
| PANTHER | 383 | 567 | 185 | 2.2E-182 | – | |
| MobiDBLite | 452 | 488 | 37 | - | – | |
| MobiDBLite | 503 | 517 | 15 | - | – | |
| MobiDBLite | 519 | 552 | 34 | - | – | |
| Coils | 565 | 567 | 3 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0319100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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