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LotjaGi5g1v0320600.1

Overview

Field Value
Gene ID LotjaGi5g1v0320600
Transcript ID LotjaGi5g1v0320600.1
Related isoforms 6
Lotus japonicus genome version Gifu v1.2
Description NAD(P)H dehydrogenase (Quinone); TAIR: AT4G27270.1 Quinone reductase family protein; Swiss-Prot: sp|Q9LSQ5|FQR1_ARATH NAD(P)H dehydrogenase (quinone) FQR1; TrEMBL-Plants: tr|I3T6Q9|I3T6Q9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0320600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:63806895..63810800) extracted from Lotus japonicus Gifu genome v1.2.

GTGCGAAATTGACATCTTCCTTACCAATTTCTCTCCCATTTCCATTATTCTAAATCATCCTTCACTTCACTAATGCATGA GTGAAGTGTGGAAATCATACTTCTGTAAACTATTGTCAAAGATACGTTTGGTGTGTTAGTGCAAACCACATCAAGAAATT CAAAGTATCCTGAAGGGAATTCGCCGGTTTTCTCAATTGCATCCAATATACAATAATTGGTGGGGGCGAATTGAACCTAA AACAGAAGATGAGTTTTTTCAATAGTTTTTCCAGCGAGGAACCTATCAGACGACGACACGAAAACATAGACCAATTTAAA GATTAACAGTTAATTTAACCTTAATATTACAAATCTCTATATAAGCATAGGTACGCTGTCAACGTTCTCACCCACTACCT TCTTGTTTTGCTTTCTTCACAGAGCAAGAGAGAAAGAGAGAGCACCACAGAGCAATCGACACCATCAATGGCCACCACTA AAGTTTACATTGTGTAAGCCATTCTTCCTTTTTCTTCTTCGCAACTTCTTTTCCTGATGTGCAAGTTTCGAGTAGAACTT TAATTTCATTGGGTTATCTTTCTTTTCAATTTTTCCCTTTGCTTTTCAATTGTACATGGTAAAGTTCTTTAATTTCTCAG TCTCTGAATTTTGGGTATGCTTCATTTTCTTCATATATGTAGTGAATTTTGGGTTACTATCCTCTTTTGTTTTGAATTTT GATGCTGTCTTATCATTTCGGGTGATACGATGATGTTGTTCCCTACCCAGTTTGTTGATTTGGTATTTGGTCTGAGAAAG TTTGAGAAACTGATGAATTGGAAGTGAATGAGTTGTCTCTCCAATTGTATGATTTTTATTTGGGAAAGTCAACTCTGCAT GTTAGTACTACTTTATCATTTCCTCTTTTTAGGGATTTTAATATATCAATTTTTTTTGTTGATGATAAACAGCTCTCAGA ATTTCATGCCAAAAATTGGTTGATTTTGTTGTTTGAATGTTTGTCATCAATTAATTTCTTTCTGTTGGCTATATGTAGAA TCCAATGAAGCCAGATTAGAGAATCATATGAATTATGTAACTCACAGATTTATGTTTGAGCATGATGAGAAATTAGTCTA TTGACTATTGTCCAGTTCTTCATACAGTTTGGTCCAAGGAGAAACTTTGACACAGATCTGTTTTCAGATTCTCAGTTGAT TAGTCATTTTATTTCAATCTGTTATCTTTTTTCTAATTTTTCTATCCTGGTTCACAAGGAAAATTTGCAAGAGAGAAAGA TATGATGCTGAACACTTTTCCCACCCCCAAACCCTCCTTTTTACTAGAAGGTTGTAAAGGCAAAAGCCATGGAGAAGACA GTGCAAGTGCAAGCCCCACTTGCTTTTGATAGTGTGTGGTCCTGGCATTCATCATTATTGATTCCTCTTCCTTGACTTGC AATTCCAATAAAACTTTAATATTTGAAAATGTTTGTTAGGACCCAACCGTTTCAATTATTTCTTATATAAATGCATAATT GAATGGTTTATTACTGTAGGGTGTGTGTTTTTTCAAGGTTATCATGTCTTGTCTGGTACTATAATGCTTACTTTTCTTTG GTGGTAAGTAAGTGCCACCCTGGTGCCACCTTAATCCTCGGTTGATGCATTGGTGGTAGGTAGAGTAATCTTTCGTGAGT AAGTGAATCACACCTTATTATGGGTTGTATTGACTTTGAGCTTTGGTGTTATTGACTTTTATTTCAACATTTATTGCCAA GTGCTTTTGTCTATGTACTAGGAAAGTCTGAAATGTGACTGTCACCACTCTCAACCCCCTTTGTGTGCTTTTTCTGCGGA TAATTATTAATTAGAAGTTTAGTGCCTTAAGCTATCGTCCATCCTAAGTTATACTTGATGTCTATCATTATGATTTGGTA TGAATCTGATTCAAAATCATGTTGCATGCGCAGTTACTATTCTATGTACGGACATGTTGAGAAGCTTGCTGAAGAGATTA AAAAAGGTGCAGCTTCTGTGGAAGGAGTAGAAGCAAAGCTATGGCAGGTTTGTAATGATAATTCTTCTTAGTTAATTTTT TTTTTGTGCACTTGTGGTCAATCATTCTTGACAAGGCTGGCTTCTAGTCACCATAGTGTTCAAACAATCATTGACATTGT ATATTATATTTCGATACCTGTTGGCACCACTGCAAAAAGACATTAACACTCACTTTGAGACAACAAGTGAACGAAACTCT TATGAATTGGGATGAAATTCTGTTCATGTTGCACTCAGCTGATATCCAAACACACACTAAGATGCTTTAACCAAGTTAAG TGTGTTTGGATTCACTTTTCATTGAGTCCAAAATCACTTCATGAAACTGCAGTTTGTAACTTTTTCATTTAACGTGTATT CCTTGGGTGTCAAATTTGCAACCAAGCTTGCACTTAGTCTCCACAGTCTATTATAACTTGTAATTAAAAACATGGGGAAT TTTCATCCTTCGTTTACAATATTCTTATCCATACAGGTACCTGAAACACTGTCTGAAGAGGTTCTTGGGAAGATGGGAGC ACCTCCAAGGAGTGATGTTCCAATTATCACACCCAATGAGTTACCTGAAGCTGATGGTTTATTGCTTGGTTTCCCCACAA GATTTGGAATGATGGCTGCTCAATTCAAAGCATTCATGGATGCAACTGGAGGTCTATGGCGTACACAGGCACTAGCAGGA AAGCCTGCAGGAATCTTTTACAGTACTGGTTCTCAAGGAGGTGGACAAGAGACTACTCCGTGAGTTGCCAAATCTCATTC AGTTTTTTCCCAGAAACTTAGGTCTTAAAATAAAGTGATTAAATGATACAGCCTTTCTTTAGAGTTGTTTGTTTTTTTAT TCTTCTTTTGTTAGAAGCATGTTTGGAAATTATTTTGTCAAAATCAATCATGGGAAGAAGATTTATATCATGTTTGAATC ACCTTATTTTTCCTCAGAAACAATTCCAGCACTCGAAAGCTACTCACAGAAACTTTTCTCCAGAGTTTTGGCTGTCTAAG TAGCTTTTGGATGTCAGAGTAGATTCTGAGGAAAGAGAAGCTGATGCAAACTGCTGTCATAACATCTCTTTTTTATACTT ATTATACTTTTTGAATTTTCTGAGAAACTTATTATACTTTTTGTAAAACATATCTTTTAATTTAAAAAGCATTTTTTCTG TATTGAAGTACAAGCAAATGGTGATCAATCCTTAGTTGTTTTCTGATTTTAAAAATTCTGCAGGTTGACATCCATTACAC AGCTGGTTCACCATGGGATGATTTTTGTTCCCATTGGTTACACATTTGGTGCTGGGATGTTTGAGATGGAGAATGTGAAG GGTGGATCCCCTTATGGTGCAGGTACCTATGCTGGGGATGGCTCCAGACAACCAACCGAGTTAGAACTAGCTCAAGCTTT CCATCAGGGGAAGCACTTTGCTGTGATTGCAAAGAAGCTCAAGGGATCTCAGTGATTTTTATCCTCGATACATCTTCAAT TTAAAGTTTCTTACATAAGAAAAAAGAGTGTTGCGTGTAATATTCAGTTTGATGTTCCCATAACGTTGAACAAAATAAGA TACATATTTCAATAATGCTGCATATTTCAATACAAATCTTGTCAATTATATCAGTGCATCCTAAAAAACAGTGTTATTGT ACAAGAATTTTGCAATTATTAGTTTCTATTTTCATCGAGATCAAAAGTGTTTGGCATAATGTTATGTTGAAAAAATGGGC TCTTCATCTCACGATGGATTCCGTCAGTATTCATAGTTTTTGTCTCTTGTTTGTTTTCCTGTCGAAAGTCATTTGTTTGG AGGGACAATTACAGTCTTCCCGAGTAGGTTTACACTTGTCAAAGACAAAAACAAAATGATTGAGCT
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0320600.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGGCCACCACTAAAGTTTACATTGTTTACTATTCTATGTACGGACATGTTGAGAAGCTTGCTGAAGAGATTAAAAAAGG TGCAGCTTCTGTGGAAGGAGTAGAAGCAAAGCTATGGCAGGTACCTGAAACACTGTCTGAAGAGGTTCTTGGGAAGATGG GAGCACCTCCAAGGAGTGATGTTCCAATTATCACACCCAATGAGTTACCTGAAGCTGATGGTTTATTGCTTGGTTTCCCC ACAAGATTTGGAATGATGGCTGCTCAATTCAAAGCATTCATGGATGCAACTGGAGGTCTATGGCGTACACAGGCACTAGC AGGAAAGCCTGCAGGAATCTTTTACAGTACTGGTTCTCAAGGAGGTGGACAAGAGACTACTCCGTTGACATCCATTACAC AGCTGGTTCACCATGGGATGATTTTTGTTCCCATTGGTTACACATTTGGTGCTGGGATGTTTGAGATGGAGAATGTGAAG GGTGGATCCCCTTATGGTGCAGGTACCTATGCTGGGGATGGCTCCAGACAACCAACCGAGTTAGAACTAGCTCAAGCTTT CCATCAGGGGAAGCACTTTGCTGTGATTGCAAAGAAGCTCAAGGGATCTCAGTGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0320600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MATTKVYIVYYSMYGHVEKLAEEIKKGAASVEGVEAKLWQVPETLSEEVLGKMGAPPRSDVPIITPNELPEADGLLLGFP TRFGMMAAQFKAFMDATGGLWRTQALAGKPAGIFYSTGSQGGGQETTPLTSITQLVHHGMIFVPIGYTFGAGMFEMENVK GGSPYGAGTYAGDGSRQPTELELAQAFHQGKHFAVIAKKLKGSQ
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Gene3D
G3DSA:3.40.50.360
2 202 201 2.2E-79
IPR029039
PANTHER
PTHR30546
3 203 201 2.1E-126 –
PANTHER
PTHR30546:SF29
3 203 201 2.1E-126 –
TIGRFAM
TIGR01755
4 200 197 1.7E-69
IPR010089
SUPERFAMILY
SSF52218
4 201 198 3.74E-60
IPR029039
ProSiteProfiles
PS50902
6 194 189 21.259
IPR008254
Pfam
PF03358
19 145 127 1.4E-9
IPR005025

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0003955
Molecular function NAD(P)H dehydrogenase (quinone) activity Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone.
Subterm of
GO:0010181
Molecular function FMN binding Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes.
Subterm of
GO:0016491
Molecular function Oxidoreductase activity Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0320600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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