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Field | Value |
---|---|
Gene ID | LotjaGi5g1v0320600 |
Transcript ID | LotjaGi5g1v0320600.4 |
Related isoforms 6 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | NAD(P)H dehydrogenase (Quinone); TAIR: AT4G27270.1 Quinone reductase family protein; Swiss-Prot: sp|Q9LSQ5|FQR1_ARATH NAD(P)H dehydrogenase (quinone) FQR1; TrEMBL-Plants: tr|I3T6Q9|I3T6Q9_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0320600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:63807137..63809146) extracted from Lotus japonicus Gifu genome v1.2.
GGTAGGTAGAGTAATCTTTCGTGAGTAAGTGAATCACACCTTATTATGGGTTGTATTGACTTTGAGCTTTGGTGTTATTG ACTTTTATTTCAACATTTATTGCCAAGTGCTTTTGTCTATGTACTAGGAAAGTCTGAAATGTGACTGTCACCACTCTCAA CCCCCTTTGTGTGCTTTTTCTGCGGATAATTATTAATTAGAAGTTTAGTGCCTTAAGCTATCGTCCATCCTAAGTTATAC TTGATGTCTATCATTATGATTTGGTATGAATCTGATTCAAAATCATGTTGCATGCGCAGTTACTATTCTATGTACGGACA TGTTGAGAAGCTTGCTGAAGAGATTAAAAAAGGTGCAGCTTCTGTGGAAGGAGTAGAAGCAAAGCTATGGCAGGTTTGTA ATGATAATTCTTCTTAGTTAATTTTTTTTTTGTGCACTTGTGGTCAATCATTCTTGACAAGGCTGGCTTCTAGTCACCAT AGTGTTCAAACAATCATTGACATTGTATATTATATTTCGATACCTGTTGGCACCACTGCAAAAAGACATTAACACTCACT TTGAGACAACAAGTGAACGAAACTCTTATGAATTGGGATGAAATTCTGTTCATGTTGCACTCAGCTGATATCCAAACACA CACTAAGATGCTTTAACCAAGTTAAGTGTGTTTGGATTCACTTTTCATTGAGTCCAAAATCACTTCATGAAACTGCAGTT TGTAACTTTTTCATTTAACGTGTATTCCTTGGGTGTCAAATTTGCAACCAAGCTTGCACTTAGTCTCCACAGTCTATTAT AACTTGTAATTAAAAACATGGGGAATTTTCATCCTTCGTTTACAATATTCTTATCCATACAGGTACCTGAAACACTGTCT GAAGAGGTTCTTGGGAAGATGGGAGCACCTCCAAGGAGTGATGTTCCAATTATCACACCCAATGAGTTACCTGAAGCTGA TGGTTTATTGCTTGGTTTCCCCACAAGATTTGGAATGATGGCTGCTCAATTCAAAGCATTCATGGATGCAACTGGAGGTC TATGGCGTACACAGGCACTAGCAGGAAAGCCTGCAGGAATCTTTTACAGTACTGGTTCTCAAGGAGGTGGACAAGAGACT ACTCCGTGAGTTGCCAAATCTCATTCAGTTTTTTCCCAGAAACTTAGGTCTTAAAATAAAGTGATTAAATGATACAGCCT TTCTTTAGAGTTGTTTGTTTTTTTATTCTTCTTTTGTTAGAAGCATGTTTGGAAATTATTTTGTCAAAATCAATCATGGG AAGAAGATTTATATCATGTTTGAATCACCTTATTTTTCCTCAGAAACAATTCCAGCACTCGAAAGCTACTCACAGAAACT TTTCTCCAGAGTTTTGGCTGTCTAAGTAGCTTTTGGATGTCAGAGTAGATTCTGAGGAAAGAGAAGCTGATGCAAACTGC TGTCATAACATCTCTTTTTTATACTTATTATACTTTTTGAATTTTCTGAGAAACTTATTATACTTTTTGTAAAACATATC TTTTAATTTAAAAAGCATTTTTTCTGTATTGAAGTACAAGCAAATGGTGATCAATCCTTAGTTGTTTTCTGATTTTAAAA ATTCTGCAGGTTGACATCCATTACACAGCTGGTTCACCATGGGATGATTTTTGTTCCCATTGGTTACACATTTGGTGCTG GGATGTTTGAGATGGAGAATGTGAAGGGTGGATCCCCTTATGGTGCAGGTACCTATGCTGGGGATGGCTCCAGACAACCA ACCGAGTTAGAACTAGCTCAAGCTTTCCATCAGGGGAAGCACTTTGCTGTGATTGCAAAGAAGCTCAAGGGATCTCAGTG ATTTTTATCCTCGATACATCTTCAATTTAAAGTTTCTTACATAAGAAAAAAGAGTGTTGCGTGTAATATTCAGTTTGATG TTCCCATAACGTTGAACAAAATAAGATACATATTTCAATAATGCTGCATATTTCAATACAAATCTTGTCAATTATATCAG TGCATCCTAA
CDS sequence (LotjaGi5g1v0320600.4) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGTACGGACATGTTGAGAAGCTTGCTGAAGAGATTAAAAAAGGTGCAGCTTCTGTGGAAGGAGTAGAAGCAAAGCTATG GCAGGTACCTGAAACACTGTCTGAAGAGGTTCTTGGGAAGATGGGAGCACCTCCAAGGAGTGATGTTCCAATTATCACAC CCAATGAGTTACCTGAAGCTGATGGTTTATTGCTTGGTTTCCCCACAAGATTTGGAATGATGGCTGCTCAATTCAAAGCA TTCATGGATGCAACTGGAGGTCTATGGCGTACACAGGCACTAGCAGGAAAGCCTGCAGGAATCTTTTACAGTACTGGTTC TCAAGGAGGTGGACAAGAGACTACTCCGTTGACATCCATTACACAGCTGGTTCACCATGGGATGATTTTTGTTCCCATTG GTTACACATTTGGTGCTGGGATGTTTGAGATGGAGAATGTGAAGGGTGGATCCCCTTATGGTGCAGGTACCTATGCTGGG GATGGCTCCAGACAACCAACCGAGTTAGAACTAGCTCAAGCTTTCCATCAGGGGAAGCACTTTGCTGTGATTGCAAAGAA GCTCAAGGGATCTCATGCATCCTAA
Protein sequence (LotjaGi5g1v0320600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.
MYGHVEKLAEEIKKGAASVEGVEAKLWQVPETLSEEVLGKMGAPPRSDVPIITPNELPEADGLLLGFPTRFGMMAAQFKA FMDATGGLWRTQALAGKPAGIFYSTGSQGGGQETTPLTSITQLVHHGMIFVPIGYTFGAGMFEMENVKGGSPYGAGTYAG DGSRQPTELELAQAFHQGKHFAVIAKKLKGSHAS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 191 | 191 | 6.5E-119 | – | |
PANTHER | 1 | 191 | 191 | 6.5E-119 | – | |
ProSiteProfiles | 1 | 182 | 182 | 17.72 | ||
TIGRFAM | 1 | 188 | 188 | 5.3E-64 | ||
Gene3D | 1 | 190 | 190 | 5.1E-73 | ||
SUPERFAMILY | 1 | 189 | 189 | 2.71E-54 | ||
Pfam | 7 | 133 | 127 | 1.4E-9 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Molecular function | NAD(P)H dehydrogenase (quinone) activity | Catalysis of the reaction: NAD(P)H + H+ + a quinone = NAD(P)+ + a hydroquinone. | ||
Molecular function | FMN binding | Interacting selectively and non-covalently with flavin mono nucleotide. Flavin mono nucleotide (FMN) is the coenzyme or the prosthetic group of various flavoprotein oxidoreductase enzymes. | ||
Molecular function | Oxidoreductase activity | Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced. |
Expression pattern of LotjaGi5g1v0320600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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