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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0321700 |
| Transcript ID | LotjaGi5g1v0321700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Nucleobase-ascorbate transporter-like protein; TAIR: AT1G49960.1 Xanthine/uracil permease family protein; Swiss-Prot: sp|P93039|NAT4_ARATH Nucleobase-ascorbate transporter 4; TrEMBL-Plants: tr|A0A151U7G9|A0A151U7G9_CAJCA Nucleobase-ascorbate transporter 4; Found in the gene: LotjaGi5g1v0321700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64042136..64047187) extracted from Lotus japonicus Gifu genome v1.2.
CTGCAGCCAATAAAAATGACACTGCTTCCTCTGTTGAAAAGTCCATTTGTGAAAGCATTGCAAGCACACATTGCCATTTC CTAGAGTCACAACGTCGCTGCCAACCCCTTCTCACTCTCACTCTTATCCTTTCTCTCTCTGCATTTAGTATCAGACAAAG TACACACCCTTTTCCTTATTCTCTGCGTTATAAGAAACACTAAAACAGAGAAAACAGAGACACACACAGACACAAAGACA CAGAGAGAGAATGGCAGGAGGAGGAGGAGGAAAGGCTGATGAATTCGAACCTCATCCTGTGAAGGATCAACTTCCAGGTG TTGATTACTGTGTTAGCAGCTCTCCCTCTTGGCGTAAGTGATAATTAACCTCTTTTTTCTCTCTGGCTTTTTTTAGCTCA TGCCCATTTCTTGTTGAGGCTAAGATTTTCACCTTTGGTTGAATTATTTGATTTTCAGCTGAAGGGATTCTCCTTGGGTT TCAGAACTATCTGGTTATGCTTGGGACCATCGTCATTGTTTCAACCATTCTTGTCCCTTTGATGGGTGGTGGCAATGTAA TGAAATTTGATGACTTCTATTTTTCCTGAACAATTTCATGTGTTTTTTTGTTTTGTTTGCTCATTCTGTTTGAACCCCAT TTCTTGTTATTTTTGGAAATCTTAGGTGGAGAAGGCTGAAATGATACAGACTCTGCTGTTTGTTGCTGGCATAAACACAC TGCTGCAAACATGGTTTGGAACAAGGCTTCCAGTGGTTGTGGGGGCATCCTATGCTTTCATCATTCCTGCTGTTTCCATT GCTTCATCTAGCAGGATGAGTGTATTTCCTGATCCACATCAGGTTAGTGTGTTCAGGGTTTTACGCTGCGGCCGCAATTG CGGTTGTAGGCCGCAATTTGAAACCATGAGTGTATACATGTTGTTGTGCAATAATTGATGAATATTTTAGAAATGCTGAG CTCTTTTCATGAGAAAAAGAGGAAGGAGCAAGAGTTTACTTGGAAATGGGGAAATGTGTTGGTGCATGTCACTGATTTCA ATTGATTTTGAATTTATCAGAGATTTAAACGATCCATGAGAGCAATACAAGGGGCACTTATTATAGCATCGTTATTTCAA ATCATCATTGGCTTTTTTGGATTCTGGAGGATATTTGCCAGGTAGGATATGGACATGATACTTGAGAATGTCTATTTATG GTTACTGTGTTTTTTTCTTCTTTGGAAGTAGAAGAACTCAGTTTTATTGACTTTTGATATGGCAGGTTTCTCAGCCCTCT CAGTGCTGTTCCCCTTGTCACCCTTACTGGCCTAGGACTCTTTGCAATAGGGTTTCCAAGAGTACATACATTGGTGCTTA ATCTGTTTCATCTGTATTATCAATTATTTAACAAACATAAACTTTGGTTTTCCTTTGGTTCTTGTAGTTGGCAGATTGTG TTGAAATTGGTCTTCCTGCATTGGTTATTCTGGTTATTCTGTCCCAGGTATGTATTATTCCCTCTCTCACCCAATTCAAT TGCGTGCATGTTTGGAAACTTTTCTTTAATTGATTCTGAAGCCATAATCAGTTCTAAAAAGGAGTTTTTGTGAGTAGTTT ATGGGTTCCATAATTGATTCTGATGAAAATGAGTATCATCCACACATGTTATTCGTTCTTTTGAAATATTTGTATAGCAA CAATATAATAAGGTGAAAAGTTCAAGCTCTAATTTTTTGTTACATTATCCAAATTCCTGTTGGATGAAGAGCACACAATT TTGTTACATTATCCACAAATGCTATTCGCTATTAGAAGATTCATCACATAGGCAATGTGGGACTTGGAACTTTTGAAATA CACATAATTTTCCAACAATTCCTGCCTAGTAGGTTGCTTAGATATATGCAGTACCTGCTTCTGTCTAACATTTCTTTCTG CATAATTTCATTTGACTTGGCTGACTCTAAAATAAAATTTAAGAAGAAAGGTCGTGAAAGTGGTAGTGTAACTTTGTAAC AAGTGATTGCGCTTATTGTATGTGCATTTTATTGATCAAAATAGCTCAACATTTAAAATTGATCTTTCTACTTTTGTCAA ATCAATTTCCTTGCAGTATATTCCCCAGAAGTTGAAATCAAAAGGGGTTGATCGATTTGCGCTACTAGTCTCAATTGGAA TTGTATGGGCTTTTGCTGAGATTTTGACTGCAGCTGGAGCATATAATAAAAGATCCCCGACAACTCAATTCAGTTGTCGT ACCGATCGATCCGGATTAATCAGTGCTGCTCCATGGTCAGTCCTATGTAGCTAGTTTTTGTTTACAAGACTCATATAATG TTTCAAAGCCATGTATTATAGATGATATCCAGGTCTCCAAAGCATCAAAGTAGGCAGAGATAGGTTCTGGACAAGAGATA TAATATCATAATATCCTTTGTTTATTACTGTATACAAAAGAGCTGAATATGTTCTGTACATCTCTTACTCCATTAATGAC AATTTCATTTGTGCTGATGGTCATGTAAAGCTTTATTTTCTGATTAGATTTATCTCCATTTGTGCAGGATAAGAGTTCCA TATCCATTTCAATGGGGAAGGCCTTCTTTCGATGCTGGTGATACTTTTGCAATGGTTGCTGCTTCGCTTGTTGCAATTAT AGAGGTTCACTTTAATCCTTCTTTCTTTCTTTCGTTTTTTGTTTAATATAGACCAACTTGTGTGGGATGATTGTTATATT TTTGGATCGAATGATGACATTACTAATGCTAGCATTAGTAACTAGACTAGAATATGTACCATTATCTGTATGACTTCGTG AGCTAGACATTTTGACTTGTCAAAATTCTCTGCGAACTACCTTTGTTCTTTTTTATATTCTCTTCTTGTGATTTTGATAA TTACTAATTAGAAGGAACATGATTAAATTTATTTCTATTTGGATACACTTTGATATAAGTTTTGTCCTTTTCATTCTCTG AGGACAGTCAACTGGGACATTCATTGCAACATCAAGACTTAGCAGTGCAACCCCAATTCCTCCCTCTGTCCTTAGCCGCG GTGTTGGCTGGCTGGTATTATGTGATTACTTGACATTACATCTGTATATGCATTTACTTCTTGGACATTAGAATTAAATG TTAAAGTGTGATGATTTCAGGGTGTGAGTACTCTTGTAGATGGCTTTTTTGGCGCAGCAACTGGATCTACTGCATCAGTG TACAATATTATAACAATAATATTACTATATTAAAATTTATCCTTTACTATTAAAAATTTAATGAAGACATTATCTAATTT ACTTTTCTTTCATTTCCTTGGCATTAAGTGAAAATGCAGGACTACTGGGTTTAACGCGAGTTGGAAGTCGGAGAGTCATT GAAATATCAGCAGGATTCATGCTTTTCTTCTCTATATTAGGTGTTGCATCAGCTTCTGCTAATTTCTAAACATTCTGATC AATTGGTGAAAGCTACACATTGGTCATACTTATATGTTTGTAGTGTACAATTTGCTCATACTTATGTGTCATTTTGTTTG CCTACTACTTTTTGCTAACAGCATCCAGGTTTGTGTTTCACTGTCAGGTAAATTTGGAGCTGTTCTTGCCTCAATACCAT TGCCAATTATAGCAGCTCTTTACTGTGTTCTCTTCGCCTATGTGGGTATGTATGGTTTATCTGTTTAATTGTCAGATACT TTGAAAATTATTTCATATCAATCAGGATTAGGGATCAGGTATTATAATATTACTATCTTTATGTGCATTCATAGGTGACA ACTCAAAAGTTAGTCATCTAGAAATCAAAAACAAATGAGTGATTGCAATAGAACTTAGCATGTAAAATGTATTTCTGTTT AAGTCGTGCTAGCTTAAAGCATGTCTGGAAATTCTTCTACAATTGATTCCAAAGTAAAATCAATTCGGGGGAGAAGCTTG TAGCTTCTGGGTGCCAGAATTGATTATAAGAAATCCGAACATGCTATTAATGTATTGATCCTTCTCATTCTGATCTGATT GTAATGTTTCTTCTGTGATGAGCAGCTTCAGCTGGCCTTGGTTATCTTCAGTTCTGCAATCTAAATAGCTACAGATCAAT GTTCATCATTGGCTTTTCTCTCTTCCTGGGCCTATCAGTTCCGCAATATTTCAATGAACAACTGTTGCTATCCGGACATG GCCCTGTTCATACCGGCTCTATTGCGGTAAGTGTAAATCTTGCCTGAAATTCTTTATTTTGCTTGAGCCATATTTGATTC TTACTGGTTCATTGTAAAATCTCATTATACAGTTCAACAACATAGTGCAAGTGATTTTCTCATCCCCAGCAACTGTGGCA ATTATAGTTGCTTACTTGCTGGATGTCACTCTGAGTCGCGGGCACAGCTCAACTCGCCGAGACAGTGGGAGACACTGGTG GGAAAAATTCAGGAACTTCGATCAGGATCACAGAAATGAAGAGTTCTATTCACTGCCTATGAACCTAAACAGATATTTCC CTTCATTATGAGTGCACTTCCATTTCAAAAAACAAGAGGAAATATGGCATTCTCTTGACAATTTTATTGTCTTATATAAA TATATACTTACTCAAATAGGCTCTAAAAACATTCCAGCAAAATGAATGGTAAATTATAAGAATACTGAAAGTGACTAGCA TGTAAGTTCTTGTCTTGCATATCAAAGGCACTACTTGAAGTAGAATATCCTCTTCATTAGCAATCTGCATGGGACAACAT AATGAATCAACTTATTTACCCTCTACAACTAAAGTCTAGTAGGCTTGAAGCCTCGAATTGAATTTGGGCCCATATTGGCA TACTTTTGATAAAGTCTTACATTGAGTAGAGATGTGGTCAAAAGTGTCCTTATAAAGGTAGAACAACTCTCACATTTGAG CTAGGTTTTTGCAAAGAGTTAAGCCTAACCAAAATTCTAAGATAGTATTAGAGTCTATCCTACACGTGAATACAACTTAT ATATGAGTCACCTACATATGTTTATTCTTGCAGATTTTACGACTTTATGCTATATATGTCATGCATTGACAATGCATGAG GAGTATGTTGAG
CDS sequence (LotjaGi5g1v0321700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCAGGAGGAGGAGGAGGAAAGGCTGATGAATTCGAACCTCATCCTGTGAAGGATCAACTTCCAGGTGTTGATTACTG TGTTAGCAGCTCTCCCTCTTGGCCTGAAGGGATTCTCCTTGGGTTTCAGAACTATCTGGTTATGCTTGGGACCATCGTCA TTGTTTCAACCATTCTTGTCCCTTTGATGGGTGGTGGCAATGTGGAGAAGGCTGAAATGATACAGACTCTGCTGTTTGTT GCTGGCATAAACACACTGCTGCAAACATGGTTTGGAACAAGGCTTCCAGTGGTTGTGGGGGCATCCTATGCTTTCATCAT TCCTGCTGTTTCCATTGCTTCATCTAGCAGGATGAGTGTATTTCCTGATCCACATCAGAGATTTAAACGATCCATGAGAG CAATACAAGGGGCACTTATTATAGCATCGTTATTTCAAATCATCATTGGCTTTTTTGGATTCTGGAGGATATTTGCCAGG TTTCTCAGCCCTCTCAGTGCTGTTCCCCTTGTCACCCTTACTGGCCTAGGACTCTTTGCAATAGGGTTTCCAAGATTGGC AGATTGTGTTGAAATTGGTCTTCCTGCATTGGTTATTCTGGTTATTCTGTCCCAGTATATTCCCCAGAAGTTGAAATCAA AAGGGGTTGATCGATTTGCGCTACTAGTCTCAATTGGAATTGTATGGGCTTTTGCTGAGATTTTGACTGCAGCTGGAGCA TATAATAAAAGATCCCCGACAACTCAATTCAGTTGTCGTACCGATCGATCCGGATTAATCAGTGCTGCTCCATGGATAAG AGTTCCATATCCATTTCAATGGGGAAGGCCTTCTTTCGATGCTGGTGATACTTTTGCAATGGTTGCTGCTTCGCTTGTTG CAATTATAGAGTCAACTGGGACATTCATTGCAACATCAAGACTTAGCAGTGCAACCCCAATTCCTCCCTCTGTCCTTAGC CGCGGTGTTGGCTGGCTGGGTGTGAGTACTCTTGTAGATGGCTTTTTTGGCGCAGCAACTGGATCTACTGCATCAGTTGA AAATGCAGGACTACTGGGTTTAACGCGAGTTGGAAGTCGGAGAGTCATTGAAATATCAGCAGGATTCATGCTTTTCTTCT CTATATTAGGTAAATTTGGAGCTGTTCTTGCCTCAATACCATTGCCAATTATAGCAGCTCTTTACTGTGTTCTCTTCGCC TATGTGGCTTCAGCTGGCCTTGGTTATCTTCAGTTCTGCAATCTAAATAGCTACAGATCAATGTTCATCATTGGCTTTTC TCTCTTCCTGGGCCTATCAGTTCCGCAATATTTCAATGAACAACTGTTGCTATCCGGACATGGCCCTGTTCATACCGGCT CTATTGCGTTCAACAACATAGTGCAAGTGATTTTCTCATCCCCAGCAACTGTGGCAATTATAGTTGCTTACTTGCTGGAT GTCACTCTGAGTCGCGGGCACAGCTCAACTCGCCGAGACAGTGGGAGACACTGGTGGGAAAAATTCAGGAACTTCGATCA GGATCACAGAAATGAAGAGTTCTATTCACTGCCTATGAACCTAAACAGATATTTCCCTTCATTATGA
Protein sequence (LotjaGi5g1v0321700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGGGGGKADEFEPHPVKDQLPGVDYCVSSSPSWPEGILLGFQNYLVMLGTIVIVSTILVPLMGGGNVEKAEMIQTLLFV AGINTLLQTWFGTRLPVVVGASYAFIIPAVSIASSSRMSVFPDPHQRFKRSMRAIQGALIIASLFQIIIGFFGFWRIFAR FLSPLSAVPLVTLTGLGLFAIGFPRLADCVEIGLPALVILVILSQYIPQKLKSKGVDRFALLVSIGIVWAFAEILTAAGA YNKRSPTTQFSCRTDRSGLISAAPWIRVPYPFQWGRPSFDAGDTFAMVAASLVAIIESTGTFIATSRLSSATPIPPSVLS RGVGWLGVSTLVDGFFGAATGSTASVENAGLLGLTRVGSRRVIEISAGFMLFFSILGKFGAVLASIPLPIIAALYCVLFA YVASAGLGYLQFCNLNSYRSMFIIGFSLFLGLSVPQYFNEQLLLSGHGPVHTGSIAFNNIVQVIFSSPATVAIIVAYLLD VTLSRGHSSTRRDSGRHWWEKFRNFDQDHRNEEFYSLPMNLNRYFPSL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 41 | 41 | - | – | |
| PANTHER | 2 | 528 | 527 | 6.8E-294 | – | |
| PANTHER | 2 | 528 | 527 | 6.8E-294 | – | |
| Pfam | 38 | 438 | 401 | 1.3E-64 | ||
| Phobius | 42 | 62 | 21 | - | – | |
| TMHMM | 45 | 67 | 23 | - | – | |
| Phobius | 63 | 73 | 11 | - | – | |
| Phobius | 74 | 91 | 18 | - | – | |
| TMHMM | 74 | 91 | 18 | - | – | |
| Phobius | 92 | 96 | 5 | - | – | |
| TMHMM | 95 | 114 | 20 | - | – | |
| Phobius | 97 | 113 | 17 | - | – | |
| Phobius | 114 | 133 | 20 | - | – | |
| Phobius | 134 | 155 | 22 | - | – | |
| TMHMM | 135 | 157 | 23 | - | – | |
| Phobius | 156 | 160 | 5 | - | – | |
| TMHMM | 161 | 183 | 23 | - | – | |
| Phobius | 161 | 182 | 22 | - | – | |
| Phobius | 183 | 188 | 6 | - | – | |
| Phobius | 189 | 207 | 19 | - | – | |
| TMHMM | 190 | 209 | 20 | - | – | |
| Phobius | 208 | 218 | 11 | - | – | |
| TMHMM | 219 | 241 | 23 | - | – | |
| Phobius | 219 | 241 | 23 | - | – | |
| Phobius | 242 | 361 | 120 | - | – | |
| TMHMM | 362 | 384 | 23 | - | – | |
| Phobius | 362 | 384 | 23 | - | – | |
| Phobius | 385 | 389 | 5 | - | – | |
| TMHMM | 388 | 410 | 23 | - | – | |
| Phobius | 390 | 410 | 21 | - | – | |
| Phobius | 411 | 421 | 11 | - | – | |
| TMHMM | 417 | 439 | 23 | - | – | |
| Phobius | 422 | 439 | 18 | - | – | |
| Phobius | 440 | 458 | 19 | - | – | |
| Phobius | 459 | 479 | 21 | - | – | |
| TMHMM | 459 | 481 | 23 | - | – | |
| Phobius | 480 | 528 | 49 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0321700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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