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LotjaGi5g1v0323300.1

Overview

Field Value
Gene ID LotjaGi5g1v0323300
Transcript ID LotjaGi5g1v0323300.1
Related isoforms 7
Lotus japonicus genome version Gifu v1.2
Description BTB/POZ domain-containing protein; TAIR: AT2G14820.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2; TrEMBL-Plants: tr|V7BB31|V7BB31_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0323300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr5:64177073..64183320) extracted from Lotus japonicus Gifu genome v1.2.

AGTCGTACAAAGCAAAAAATTGCTTTTGCCAACTGTCCACCAATGAAAAAGACTGAAGTGATGATGAAAATGGTATAGGA AGGAGGATTAGGATGCAGTTGGCTGCTACTTTGATCAGACCACAGGCAGCAGCAGCATTTATTGAATGATCTCCATTTCC ATTTCATTTAATACAAACACAACCTTCCTTCCTTTCTTCTTCAACCAAAAAAGAAAAGCTGTAGCATTGTCAGTTTTGGC GTGCATAACTTAGCAACGTGCTTCCGTGGCCTAAGGTGCACACCCCAGAAATTGAATGGTGTGCTACTAACTTTCTCACC CAAATTTAAAGACCAAAATGCATTAGGAAAGTCCATCAAAAGTGCCAAAATAGAAAAAGCAGTAAACTTGAAGGTTGAAA GACTGATAGAACATTTCTTCACCGTTTGGCATTTTGTCTGCTTTTGGTTTTCTCAGACACTGTTTGTACTTTGGTTTTGA TGCAGGAGGAGAAGTAGTAACATGAGAGAATGAACTTGTTTTTGTGCTGAAAGTTGAAACTTCTTCAAGGTCAGTTTTGT TTGGTGATTCCTAAACATAAACTGCCATGCATAGCAACAACTGCTTGTGAGTTTGTTCTACAGAACAAACAGCAAGTTTG AGATTTTTTCTCACTGTGGTTGTGTAAGATCTTAGGACCTCTTGGTTTACTTTACCCTCTTCCCTCTCTTGCTTCATTTT TTTTTAATGGCTTTGGTTTACTTTTACCTTCACTACCATGGCTATTTTGTGACATTGTTTTATTGTTTTCCTCTTGGTAA TGGGGTTTTGGAGCTTAACTTAGTAAAGGGTGTGTGTATATGTTTTCAAGTTTTTATTTTTGTTGTTGTTGTTGTCAGCA ATGAGCTATGCGTGTGTTTGTTTCTGTCTGTGGGTTGAAAAAAAGGGTCTTGGGTGTTGTTGTGGTTTACACGGAGAGTG AAGTTTGGTGCTTGTCATTGTGGTATGCCAGTGGATCTAAGGCATATTTCTTCATGTGGGGTTGAGCGTTTGACACTAAG AAGTAGTATAAAGTTTTGATCTTGCCTTCATTATTTTACTAGATTTATGTGATACATTCTGGGGGATTCCTCAGATTTCA GCTTAGTTTGTTTATGATATTATTCTGGCAAGTAGCTGATGAATGATTTGTTCATAACTATAATAATTCCATATTCGTGA TCTTCTTCATTTATTCCCATGTTTGCCAAAAGATTCCTGCTGTCTACAGTTTTGGTGGTTTTTTCAACTGATACCAAGAT GCTGTTTTCAGTTGCAGGTTTTCAAACTTCAACGGTAAAGAAAAAAGGCGAAAATATATATATAAGCATTATAGATATTG ATATCCACATGTTGGATATGGAACTTGGGGTTTTTTAAGCCACTAGAGAGGTCTTGGTGGTGTGAATCTTTATTAGGATT TAAAAACAAAGAAACAGTGTAATCAGAAAGTGGAAGATAAAGAAATATGGGAAAGTGAGGTGGAGTCAGATTTGTGTGTG GTGTGTCTCTGGTTTGAGAATTGTTTAGTGTTACTTCTCTGTTGGCTATGTCCCCTGAGCTGACTCGGTGCGCCCGGGCT CCGTGGGCTTTGCCGTCGACCAAGGAAACAATCTGTTGTTGGGGTCTCTTCCCATTTAAGAGAACCTTTGCTTAAAAAAT TGGACAATCCCATCTAGTCCAATTTCTCTTTCTCTCTCTTATTCAGCTTCTTCTGCCTTGTTTGCTGTCAAGATTTGTTC ATACTCTGCAGTATTTAAACTTGCTTCTCTAGAAGCCTTTCTTTCCTCTCTTAAAGCCTAGAAATTTGCATACATTGAGG TGAGAATTGGTCCTCACAGCTGGGGTCATTTTCTCTTTTCATTTCTGGGAAATTTTGTAACACTCAGGATACTATTTATG TAGCTGAGAGTAAGCAGATCTTATATTGTCAAGATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACCTTTCAGACTGA TGGGAACAATGCGAGGTGAAAATATACACTTCTTCAACATACACATTGTTGTTTATTACTAGTTTGCATATGTTTTTAAC TGTGATGCAAATTACATTTCTCGATGTGTTGACGTTCCTTTCTTTTTCCCCCAAATATAAATTAGTTTAGATAAGCATGA TATTCATTCTCCTAACAACTTCTTTCATAACACACACATAGTGGTAATTGAAAGAATTTTGATAATTCCTATGAGTCTTT ACTTCCACTGTGTGTAATGCCATCTTCTATGTGTCTTTTGGTGATTAACGAAACATTTTCTGTTTCATCCCTTTTTTGGT TGGGGACAACAGCATGAATCTTCTTATTTCTGAGTGTTTTCCACCCTCTGTGGTAGCTACTGATGTTTGATATAAACTAA AGAGATACGCAATCAAGATAAATGCTGGGAACGGAAATGTTGCTTGTTAGATATATAAATTCTAGTTACCATTGTTGTTG CTGACCTGCACTTCATAGCTATTATAGACTAAGGCGTTCTTTGGGTTTTGCTACCCTAGCTAGGACTCTTATGATAATAA TGAAAATTAGCTATGTTCAAATTGTTTCCTTTCATTTATTCATTGATTTTGCTTCTAATGTGTAGCTACTATTTAATAAG TGATTTGTCATTATACACTAGTATTTATCTATCACTCAAAACTCCTAACATTACTATTCTTTTATATGACTGATGTGAAA AAACTTTAGGATCTACTTGATTTTTTTTTCTTTGAAGCTGTATGGCATTATCATAAGCAGAATATTTTAGTTTTATAACA TATTGGATAATATGGCTACCTATCCTTATTCCCAATTAAGGTTTTGATTCGTTTTTACATTGTTTCAAATGCCTATTATA AGAGAATGTTGATTCCTATGAACCAAAATTTAGACATTAAACTTTGACAGAACACAGGTGCACAATCAGTATCTTACACA CTTACATATAATTTTTACTTTTGACTATGGCACAAATTTTGATTGCTACATAACTTCATCAAGTAAGCAGAAATTTGTCT GACTCGGTTAATTTTCTGATTCTTCTCCCTTGGTCCACCATTGATCAACAAGCTTTCATGCTGAATCCATACAGGCCTTT TGTGTAGAAGTAATTTTGAAAGTAAACATGGTGTTGATGAAACAAGCATTCAGAGTTGAATATCCGTTTTAATAAACAAA GGGTTTAGTGTTATATCTTTGTTTCATGTGAAACTATATACAGTAAGATTTCAATCATGTAGAGCCTGGAATTTGAACTT AGGTTAAAGTTAGATGTTCAAACAATTTTTTCATGACCTGCCCACCATACTCACATGCTTCGCTTTTTTAATACTATATG TTTCCATTTTATGTATCCTGTTTTCAAACAGTTGCTAATGAGATGGATTTCAAGTGCAGGTATGTGGCAAGTGAGTTATC ATCAGATATAATTGTCAGTATAGGGGATATAAAGTTCTACTTACACAAGGTATTCCTCAATCCAGTAAATATATCTAGTC TTCAACTAAGAAATTCTACATAAGCTTTTATTGATTTCTAGAAGTCTAAATTATTCATGGCAATTTTTTGAAAGTCACTG TAAAATTATCACTTCGATATTCTTTTCCCAATACATTAATCTATCAAGGGTGATTCATATTTGAACTCTAAATCAATTTG GGTACAACAGTACAAGTTTCCATTTTGTTACTGATATTCCAAATCTTTCTGTTTGCAGTTTCCTCTTATATCAAAGAGTT CTCACTTGCAGAAGTTGATCTCTCTCAGTAATGAAGAAAACATGGATGAAGTTCACATTCCTGACATTCCTGGTGGCGCA AGTGCCTTTGAGACATGTGCTAAGTTTTGCTATGGCATGACAGTTACACTCAATGCATACAATGTAATTGCAACTCGATG TGCTGCAGAGTATCTTGGAATGCATGAGACCATTGAGAAAGGGAACCTTATTTACAAGATTGATGTTTTCCTTAGCTCTA GCATTTTCCGTAGTTGGAAGGATTCGATCATCCTTCTTCAGGCTTCAAAGTCCATGCTACCCCTGGCTGAGGATCTAAAG GTGGTGAGCCATTGCATTGAGTCTATAGCAAATAAGGCATGTGTTGATGTATCCAAAGTTGACTGGTCCTACTCCTATAA CCGGAAAAAGCTTCCAGAGGAAAACGGGGCTGAGACAAACCAGAATGAAGTCAGAACTCGAAAAGTGCCGAGAGATTGGT GGGTTGAAGATTTATGTGAGCTTGAAGTTGATTTGTACAAGTCTGTAATTACAAATATTAAAACCAAGGAAGTTCAATCC AATGATGTAGTTGGCGAAGCTTTGAAAGCTTATGCTTACAGAAGATTGCCGAATTTCAGCAAGGGTATGATCCGGTGTGG GGATGCGTCAAAGCATCGCTTGATAGTTGAAACTATTGTGTGGTTGTTGCCTGCTGAGAAAGGCAGTGTTTCTTGTAGGT TCTTGCTCAAGTTATTGAAAGCTGCCATTTTTGTAGAATCAGGAGATAGGACTAAAGAAGAGCTTGTAAAGAGAATAGGG CAGCAACTAGAGGAGGCTTCTGTGAGTGATATTTTGATTCAAGGATCAGATGGAGAGGCTACTATCTATGATGTTAGTAT AGTATATAAAATTGTAAGGGAGTTTGTTATGAAGGATCACAATGCTGAGATTGAATCAGTTGTAGATGGTGAACCTGAGG GGATAAGAAAGCCAGGGATTTTATCAGATGCTTCCAAGCTGATGGTTGCGAAACTCATAGATGCATACCTTGCCGAAATT GCAAAGGATCACAATTTACATTTGTCAGATTTTGTTAATCTTGCTGAGTTGGTGTCCAGCACCTCTCGTCCTAACCACGA TGGCCTTTACAGGGCTATTGACACATATCTGAAGGTAACTCTTCTTGAAACGAAAAATCCTTGACTCAGATTTGCACACT TCATTTTAAATTCAGTATAGTATGTTTTATAGTTTATTAAAATTCTATGCTCAATATCCAGTAATACTTTTATCATGTTT GAATCAGTTTATTTTTCCTCGGAATCAATTCTGGCACCTTGAAGCTAGTCATAAAATCTTTGCCCCAGAATTGATTCTGG CTTTAAAATCAATTGTGGAAAGATTTCCAAACATGCTTTAGCTTCACCCCTTGTTTTTGCCATGGCTCTTCTGTGGAGGC AACTAATTCATCCCTTTTGTTTTACTTTGCTTTAAAACACTACAGGAGCACCCTGGGATCAGCAAAGGTGAAAAGAAGAG GATATGCAATCTGATGGACTGCAAAAAGCTATCGGTTGACGCGTGCTTGCACGCTGTGCAAAATGAGAGGCTACCATTAC GGGTAGTCGTGCAGGTACTATATTTTGAGCAGTTGAGGACTGCTGCATCCTCAGGTACTAGCACTCCTGACATACCTAAA GGAATGAAAGATTTGAGCAATGGATCCAATGGTAGCTCAAGGTCAGGGACAACTAACCCAGATGATGACTTGGATGCTGC ATCCAAAGCGGAGGAGCTGAAGGCATTAAGAAAGGAACTTGCATCGTTGAGACTGAGTAATGGAGTTAAAGATGGAGATA GCAGCAAACCCAGCATGGACAAGGCTGTGATTGGCAAGATGAAAGGGTTGCTCAAGTCAAAGAAGTCATTCATAAAGCTC TGGGCTAGCAAAGGGGGACAAGGGGAGAACAGTGGCTCAGACTCATCAGAGAGTATTGGTTCTGCTAACCCAGAAGAAGC CAAATCTACCCCTTCCAGAAATAGGAGGCACTCAGTTTCATGAAACTAGTTGGTCCATTTTCTTGGCTTATCTTTTATTG TTTCTTTTTTGTTAGTTTCTCTATGACAAGACCCCAACACTAGTGATATCTAGTTTAAGATAGCAGAATTGTGAAGAATG GAAATCATGTGATCCTTGGCATCTACTATCCTATCATTGTTATTAAAAAGGCCTTATGCACTTCATTGAAACTATTTTGA CTCATGACTATAGAAAGAACCTGGTATAAAAGTAGTTAGTTCAGTTACTGCCAAGCATTTTGTTGAAATTTTAAGCATGT TTGGATGAACTTATTTTTCCTCAAAATTAATTCTGACATTTAGCAACAATTGTTGGAAGTTTCACCTCATAATTAGTTTC ATCTTTCAACAGTTAATTGTAGAAGGATTTTTGAACATGCAGTAACAATACTTCAAGTCTATTATGGGTATCTAATGTCA AAATAGAC
Download Genomic Sequence

CDS sequence (LotjaGi5g1v0323300.1) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGAAGTTTATGAAACTTGGTTCCAAGCCAGATACCTTTCAGACTGATGGGAACAATGCGAGGTATGTGGCAAGTGAGTT ATCATCAGATATAATTGTCAGTATAGGGGATATAAAGTTCTACTTACACAAGTTTCCTCTTATATCAAAGAGTTCTCACT TGCAGAAGTTGATCTCTCTCAGTAATGAAGAAAACATGGATGAAGTTCACATTCCTGACATTCCTGGTGGCGCAAGTGCC TTTGAGACATGTGCTAAGTTTTGCTATGGCATGACAGTTACACTCAATGCATACAATGTAATTGCAACTCGATGTGCTGC AGAGTATCTTGGAATGCATGAGACCATTGAGAAAGGGAACCTTATTTACAAGATTGATGTTTTCCTTAGCTCTAGCATTT TCCGTAGTTGGAAGGATTCGATCATCCTTCTTCAGGCTTCAAAGTCCATGCTACCCCTGGCTGAGGATCTAAAGGTGGTG AGCCATTGCATTGAGTCTATAGCAAATAAGGCATGTGTTGATGTATCCAAAGTTGACTGGTCCTACTCCTATAACCGGAA AAAGCTTCCAGAGGAAAACGGGGCTGAGACAAACCAGAATGAAGTCAGAACTCGAAAAGTGCCGAGAGATTGGTGGGTTG AAGATTTATGTGAGCTTGAAGTTGATTTGTACAAGTCTGTAATTACAAATATTAAAACCAAGGAAGTTCAATCCAATGAT GTAGTTGGCGAAGCTTTGAAAGCTTATGCTTACAGAAGATTGCCGAATTTCAGCAAGGGTATGATCCGGTGTGGGGATGC GTCAAAGCATCGCTTGATAGTTGAAACTATTGTGTGGTTGTTGCCTGCTGAGAAAGGCAGTGTTTCTTGTAGGTTCTTGC TCAAGTTATTGAAAGCTGCCATTTTTGTAGAATCAGGAGATAGGACTAAAGAAGAGCTTGTAAAGAGAATAGGGCAGCAA CTAGAGGAGGCTTCTGTGAGTGATATTTTGATTCAAGGATCAGATGGAGAGGCTACTATCTATGATGTTAGTATAGTATA TAAAATTGTAAGGGAGTTTGTTATGAAGGATCACAATGCTGAGATTGAATCAGTTGTAGATGGTGAACCTGAGGGGATAA GAAAGCCAGGGATTTTATCAGATGCTTCCAAGCTGATGGTTGCGAAACTCATAGATGCATACCTTGCCGAAATTGCAAAG GATCACAATTTACATTTGTCAGATTTTGTTAATCTTGCTGAGTTGGTGTCCAGCACCTCTCGTCCTAACCACGATGGCCT TTACAGGGCTATTGACACATATCTGAAGGAGCACCCTGGGATCAGCAAAGGTGAAAAGAAGAGGATATGCAATCTGATGG ACTGCAAAAAGCTATCGGTTGACGCGTGCTTGCACGCTGTGCAAAATGAGAGGCTACCATTACGGGTAGTCGTGCAGGTA CTATATTTTGAGCAGTTGAGGACTGCTGCATCCTCAGGTACTAGCACTCCTGACATACCTAAAGGAATGAAAGATTTGAG CAATGGATCCAATGGTAGCTCAAGGTCAGGGACAACTAACCCAGATGATGACTTGGATGCTGCATCCAAAGCGGAGGAGC TGAAGGCATTAAGAAAGGAACTTGCATCGTTGAGACTGAGTAATGGAGTTAAAGATGGAGATAGCAGCAAACCCAGCATG GACAAGGCTGTGATTGGCAAGATGAAAGGGTTGCTCAAGTCAAAGAAGTCATTCATAAAGCTCTGGGCTAGCAAAGGGGG ACAAGGGGAGAACAGTGGCTCAGACTCATCAGAGAGTATTGGTTCTGCTAACCCAGAAGAAGCCAAATCTACCCCTTCCA GAAATAGGAGGCACTCAGTTTCATGA
Download CDS Sequence

Protein sequence (LotjaGi5g1v0323300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.

MKFMKLGSKPDTFQTDGNNARYVASELSSDIIVSIGDIKFYLHKFPLISKSSHLQKLISLSNEENMDEVHIPDIPGGASA FETCAKFCYGMTVTLNAYNVIATRCAAEYLGMHETIEKGNLIYKIDVFLSSSIFRSWKDSIILLQASKSMLPLAEDLKVV SHCIESIANKACVDVSKVDWSYSYNRKKLPEENGAETNQNEVRTRKVPRDWWVEDLCELEVDLYKSVITNIKTKEVQSND VVGEALKAYAYRRLPNFSKGMIRCGDASKHRLIVETIVWLLPAEKGSVSCRFLLKLLKAAIFVESGDRTKEELVKRIGQQ LEEASVSDILIQGSDGEATIYDVSIVYKIVREFVMKDHNAEIESVVDGEPEGIRKPGILSDASKLMVAKLIDAYLAEIAK DHNLHLSDFVNLAELVSSTSRPNHDGLYRAIDTYLKEHPGISKGEKKRICNLMDCKKLSVDACLHAVQNERLPLRVVVQV LYFEQLRTAASSGTSTPDIPKGMKDLSNGSNGSSRSGTTNPDDDLDAASKAEELKALRKELASLRLSNGVKDGDSSKPSM DKAVIGKMKGLLKSKKSFIKLWASKGGQGENSGSDSSESIGSANPEEAKSTPSRNRRHSVS
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR32370
1 614 614 0.0
IPR043454
PANTHER
PTHR32370:SF97
1 614 614 0.0
IPR029960
CDD
cd18312
20 124 105 4.10891E-43 –
SUPERFAMILY
SSF54695
21 117 97 4.47E-17
IPR011333
Gene3D
G3DSA:3.30.710.10
22 120 99 2.1E-10 –
Pfam
PF00651
26 118 93 2.5E-6
IPR000210
ProSiteProfiles
PS50097
29 97 69 10.675
IPR000210
ProSiteProfiles
PS51649
210 487 278 86.188
IPR027356
Pfam
PF03000
210 463 254 8.5E-90
IPR027356
MobiDBLite
mobidb-lite
491 525 35 - –
MobiDBLite
mobidb-lite
506 523 18 - –
Coils
Coil
527 547 21 - –
MobiDBLite
mobidb-lite
584 621 38 - –
MobiDBLite
mobidb-lite
587 609 23 - –

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0005515
Molecular function Protein binding Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules).
Subterm of
GO:0009958
Biological process Positive gravitropism The orientation of plant parts towards gravity.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi5g1v0323300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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