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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0323300 |
| Transcript ID | LotjaGi5g1v0323300.7 |
| Related isoforms 7 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT2G14820.1 Phototropic-responsive NPH3 family protein; Swiss-Prot: sp|O80970|NPY2_ARATH BTB/POZ domain-containing protein NPY2; TrEMBL-Plants: tr|V7BB31|V7BB31_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0323300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64180192..64182875) extracted from Lotus japonicus Gifu genome v1.2.
TTGTGTAGAAGTAATTTTGAAAGTAAACATGGTGTTGATGAAACAAGCATTCAGAGTTGAATATCCGTTTTAATAAACAA AGGGTTTAGTGTTATATCTTTGTTTCATGTGAAACTATATACAGTAAGATTTCAATCATGTAGAGCCTGGAATTTGAACT TAGGTTAAAGTTAGATGTTCAAACAATTTTTTCATGACCTGCCCACCATACTCACATGCTTCGCTTTTTTAATACTATAT GTTTCCATTTTATGTATCCTGTTTTCAAACAGTTGCTAATGAGATGGATTTCAAGTGCAGGTATGTGGCAAGTGAGTTAT CATCAGATATAATTGTCAGTATAGGGGATATAAAGTTCTACTTACACAAGGTATTCCTCAATCCAGTAAATATATCTAGT CTTCAACTAAGAAATTCTACATAAGCTTTTATTGATTTCTAGAAGTCTAAATTATTCATGGCAATTTTTTGAAAGTCACT GTAAAATTATCACTTCGATATTCTTTTCCCAATACATTAATCTATCAAGGGTGATTCATATTTGAACTCTAAATCAATTT GGGTACAACAGTACAAGTTTCCATTTTGTTACTGATATTCCAAATCTTTCTGTTTGCAGTTTCCTCTTATATCAAAGAGT TCTCACTTGCAGAAGTTGATCTCTCTCAGTAATGAAGAAAACATGGATGAAGTTCACATTCCTGACATTCCTGGTGGCGC AAGTGCCTTTGAGACATGTGCTAAGTTTTGCTATGGCATGACAGTTACACTCAATGCATACAATGTAATTGCAACTCGAT GTGCTGCAGAGTATCTTGGAATGCATGAGACCATTGAGAAAGGGAACCTTATTTACAAGATTGATGTTTTCCTTAGCTCT AGCATTTTCCGTAGTTGGAAGGATTCGATCATCCTTCTTCAGGCTTCAAAGTCCATGCTACCCCTGGCTGAGGATCTAAA GGTGGTGAGCCATTGCATTGAGTCTATAGCAAATAAGGCATGTGTTGATGTATCCAAAGTTGACTGGTCCTACTCCTATA ACCGGAAAAAGCTTCCAGAGGAAAACGGGGCTGAGACAAACCAGAATGAAGTCAGAACTCGAAAAGTGCCGAGAGATTGG TGGGTTGAAGATTTATGTGAGCTTGAAGTTGATTTGTACAAGTCTGTAATTACAAATATTAAAACCAAGGAAGTTCAATC CAATGATGTAGTTGGCGAAGCTTTGAAAGCTTATGCTTACAGAAGATTGCCGAATTTCAGCAAGGGTATGATCCGGTGTG GGGATGCGTCAAAGCATCGCTTGATAGTTGAAACTATTGTGTGGTTGTTGCCTGCTGAGAAAGGCAGTGTTTCTTGTAGG TTCTTGCTCAAGTTATTGAAAGCTGCCATTTTTGTAGAATCAGGAGATAGGACTAAAGAAGAGCTTGTAAAGAGAATAGG GCAGCAACTAGAGGAGGCTTCTGTGAGTGATATTTTGATTCAAGGATCAGATGGAGAGGCTACTATCTATGATGTTAGTA TAGTATATAAAATTGTAAGGGAGTTTGTTATGAAGGATCACAATGCTGAGATTGAATCAGTTGTAGATGGTGAACCTGAG GGGATAAGAAAGCCAGGGATTTTATCAGATGCTTCCAAGCTGATGGTTGCGAAACTCATAGATGCATACCTTGCCGAAAT TGCAAAGGATCACAATTTACATTTGTCAGATTTTGTTAATCTTGCTGAGTTGGTGTCCAGCACCTCTCGTCCTAACCACG ATGGCCTTTACAGGGCTATTGACACATATCTGAAGGTAACTCTTCTTGAAACGAAAAATCCTTGACTCAGATTTGCACAC TTCATTTTAAATTCAGTATAGTATGTTTTATAGTTTATTAAAATTCTATGCTCAATATCCAGTAATACTTTTATCATGTT TGAATCAGTTTATTTTTCCTCGGAATCAATTCTGGCACCTTGAAGCTAGTCATAAAATCTTTGCCCCAGAATTGATTCTG GCTTTAAAATCAATTGTGGAAAGATTTCCAAACATGCTTTAGCTTCACCCCTTGTTTTTGCCATGGCTCTTCTGTGGAGG CAACTAATTCATCCCTTTTGTTTTACTTTGCTTTAAAACACTACAGGAGCACCCTGGGATCAGCAAAGGTGAAAAGAAGA GGATATGCAATCTGATGGACTGCAAAAAGCTATCGGTTGACGCGTGCTTGCACGCTGTGCAAAATGAGAGGCTACCATTA CGGGTAGTCGTGCAGGTACTATATTTTGAGCAGTTGAGGACTGCTGCATCCTCAGGTACTAGCACTCCTGACATACCTAA AGGAATGAAAGATTTGAGCAATGGATCCAATGGTAGCTCAAGGTCAGGGACAACTAACCCAGATGATGACTTGGATGCTG CATCCAAAGCGGAGGAGCTGAAGGCATTAAGAAAGGAACTTGCATCGTTGAGACTGAGTAATGGAGTTAAAGATGGAGAT AGCAGCAAACCCAGCATGGACAAGGCTGTGATTGGCAAGATGAAAGGGTTGCTCAAGTCAAAGAAGTCATTCATAAAGCT CTGGGCTAGCAAAGGGGGACAAGGGGAGAACAGTGGCTCAGACTCATCAGAGAGTATTGGTTCTGCTAACCCAGAAGAAG CCAAATCTACCCCTTCCAGAAATAGGAGGCACTCAGTTTCATGA
CDS sequence (LotjaGi5g1v0323300.7) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGTTGATGAAACAAGCATTCAGAGTTGAGTATGTGGCAAGTGAGTTATCATCAGATATAATTGTCAGTATAGGGGA TATAAAGTTCTACTTACACAAGTTTCCTCTTATATCAAAGAGTTCTCACTTGCAGAAGTTGATCTCTCTCAGTAATGAAG AAAACATGGATGAAGTTCACATTCCTGACATTCCTGGTGGCGCAAGTGCCTTTGAGACATGTGCTAAGTTTTGCTATGGC ATGACAGTTACACTCAATGCATACAATGTAATTGCAACTCGATGTGCTGCAGAGTATCTTGGAATGCATGAGACCATTGA GAAAGGGAACCTTATTTACAAGATTGATGTTTTCCTTAGCTCTAGCATTTTCCGTAGTTGGAAGGATTCGATCATCCTTC TTCAGGCTTCAAAGTCCATGCTACCCCTGGCTGAGGATCTAAAGGTGGTGAGCCATTGCATTGAGTCTATAGCAAATAAG GCATGTGTTGATGTATCCAAAGTTGACTGGTCCTACTCCTATAACCGGAAAAAGCTTCCAGAGGAAAACGGGGCTGAGAC AAACCAGAATGAAGTCAGAACTCGAAAAGTGCCGAGAGATTGGTGGGTTGAAGATTTATGTGAGCTTGAAGTTGATTTGT ACAAGTCTGTAATTACAAATATTAAAACCAAGGAAGTTCAATCCAATGATGTAGTTGGCGAAGCTTTGAAAGCTTATGCT TACAGAAGATTGCCGAATTTCAGCAAGGGTATGATCCGGTGTGGGGATGCGTCAAAGCATCGCTTGATAGTTGAAACTAT TGTGTGGTTGTTGCCTGCTGAGAAAGGCAGTGTTTCTTGTAGGTTCTTGCTCAAGTTATTGAAAGCTGCCATTTTTGTAG AATCAGGAGATAGGACTAAAGAAGAGCTTGTAAAGAGAATAGGGCAGCAACTAGAGGAGGCTTCTGTGAGTGATATTTTG ATTCAAGGATCAGATGGAGAGGCTACTATCTATGATGTTAGTATAGTATATAAAATTGTAAGGGAGTTTGTTATGAAGGA TCACAATGCTGAGATTGAATCAGTTGTAGATGGTGAACCTGAGGGGATAAGAAAGCCAGGGATTTTATCAGATGCTTCCA AGCTGATGGTTGCGAAACTCATAGATGCATACCTTGCCGAAATTGCAAAGGATCACAATTTACATTTGTCAGATTTTGTT AATCTTGCTGAGTTGGTGTCCAGCACCTCTCGTCCTAACCACGATGGCCTTTACAGGGCTATTGACACATATCTGAAGGA GCACCCTGGGATCAGCAAAGGTGAAAAGAAGAGGATATGCAATCTGATGGACTGCAAAAAGCTATCGGTTGACGCGTGCT TGCACGCTGTGCAAAATGAGAGGCTACCATTACGGGTAGTCGTGCAGGTACTATATTTTGAGCAGTTGAGGACTGCTGCA TCCTCAGGTACTAGCACTCCTGACATACCTAAAGGAATGAAAGATTTGAGCAATGGATCCAATGGTAGCTCAAGGTCAGG GACAACTAACCCAGATGATGACTTGGATGCTGCATCCAAAGCGGAGGAGCTGAAGGCATTAAGAAAGGAACTTGCATCGT TGAGACTGAGTAATGGAGTTAAAGATGGAGATAGCAGCAAACCCAGCATGGACAAGGCTGTGATTGGCAAGATGAAAGGG TTGCTCAAGTCAAAGAAGTCATTCATAAAGCTCTGGGCTAGCAAAGGGGGACAAGGGGAGAACAGTGGCTCAGACTCATC AGAGAGTATTGGTTCTGCTAACCCAGAAGAAGCCAAATCTACCCCTTCCAGAAATAGGAGGCACTCAGTTTCATGA
Protein sequence (LotjaGi5g1v0323300.7) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVLMKQAFRVEYVASELSSDIIVSIGDIKFYLHKFPLISKSSHLQKLISLSNEENMDEVHIPDIPGGASAFETCAKFCYG MTVTLNAYNVIATRCAAEYLGMHETIEKGNLIYKIDVFLSSSIFRSWKDSIILLQASKSMLPLAEDLKVVSHCIESIANK ACVDVSKVDWSYSYNRKKLPEENGAETNQNEVRTRKVPRDWWVEDLCELEVDLYKSVITNIKTKEVQSNDVVGEALKAYA YRRLPNFSKGMIRCGDASKHRLIVETIVWLLPAEKGSVSCRFLLKLLKAAIFVESGDRTKEELVKRIGQQLEEASVSDIL IQGSDGEATIYDVSIVYKIVREFVMKDHNAEIESVVDGEPEGIRKPGILSDASKLMVAKLIDAYLAEIAKDHNLHLSDFV NLAELVSSTSRPNHDGLYRAIDTYLKEHPGISKGEKKRICNLMDCKKLSVDACLHAVQNERLPLRVVVQVLYFEQLRTAA SSGTSTPDIPKGMKDLSNGSNGSSRSGTTNPDDDLDAASKAEELKALRKELASLRLSNGVKDGDSSKPSMDKAVIGKMKG LLKSKKSFIKLWASKGGQGENSGSDSSESIGSANPEEAKSTPSRNRRHSVS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 9 | 604 | 596 | 0.0 | ||
| PANTHER | 9 | 604 | 596 | 0.0 | ||
| SUPERFAMILY | 12 | 107 | 96 | 6.67E-17 | ||
| Gene3D | 12 | 110 | 99 | 2.1E-10 | – | |
| CDD | 12 | 114 | 103 | 1.39658E-42 | – | |
| Pfam | 16 | 108 | 93 | 2.2E-6 | ||
| ProSiteProfiles | 19 | 87 | 69 | 10.675 | ||
| ProSiteProfiles | 200 | 477 | 278 | 86.188 | ||
| Pfam | 200 | 453 | 254 | 8.1E-90 | ||
| MobiDBLite | 481 | 515 | 35 | - | – | |
| MobiDBLite | 496 | 513 | 18 | - | – | |
| Coils | 517 | 537 | 21 | - | – | |
| MobiDBLite | 574 | 611 | 38 | - | – | |
| MobiDBLite | 577 | 599 | 23 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). | ||
| Biological process | Positive gravitropism | The orientation of plant parts towards gravity. |
Expression pattern of LotjaGi5g1v0323300.7, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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