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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0325000 |
| Transcript ID | LotjaGi5g1v0325000.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); TAIR: AT3G19540.1 glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620); Swiss-Prot: sp|B3PC08|GATA_CELJU Glutamyl-tRNA(Gln) amidotransferase subunit A; TrEMBL-Plants: tr|A0A0L9U0F0|A0A0L9U0F0_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0325000 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:64285662..64289325) extracted from Lotus japonicus Gifu genome v1.2.
CTCCCCATAAAGCACCAAACCAAACAGATACTCCTACCATTTTCTCTCTCTCTTCTGTGCGTTCCACTTTTTCTCTCTCC AGATTCAGAAACCGTTCCTTCACACACTCACTCACACAGACACAGTCACACTACCTCACTCACTCTCTCTTCAAAACCGT TTCTCATTCTATGAATTTCTCTCCCTTCATTCTCCTTCTTCACTAGCTTCTTCTTCTTCTCCTGTGTTTCCCCTTCTGAT CCTCCTCTTCAATGGAAAAGAAACAGGGTTTCTTCTCCGCTCTCAAACACGAGGTAGTTCGCGGCCTCTCACCTTCCCGT TCCCGTTCCACCAGCCCCGCCCGAACCGCCTCACCCATCTCCACCCTCCTCCGTAGGAAAAAACACCTCGCCGCCCCCAC CCTTGACTCCTCCGTCGCGAGATCCGGCAGCCTGAGGCCGCTAGGAGAGACTCTAACGCCTCTCATGGAGGGACCTGACC AGGAAAACGGGGACCCCAAACGGGTCGGGTCGGGTCTCGGAAACTGGATGAAGGGTCAGCTGTCTCGTACCCCCTCCGTC TCGTACAAGAGGTCTGATCTGAGGCTTCTGCTTGGTGTCATGGGTGCGCCGCTGGCTCCGCTTCATGTCTGCTCCACCGA CCCTTTGCCTCATCTCAGCATTAAGGACACACCCATCGTGAGTTTTCATTACCCATTTCTCTTGCTTTGGTGTTTTGCTG TTTTTTGAGTGAATGGGGTTTCTGAATTCACTCAGCTTTTTGTTTTGGATGTATGTTGTTTTTGGATTTTTGAGCATTTT CTTTTCTCTGTCTTGTTATGAAGTAGCACAGATTCAATGTCTTTCTCCTGAGTAATTGAGAATATGTTTTTTCTGGTAAC TTATATGGTGTTTTTATGTTCCTTGTCGTGTTTTCATTCCGTGGATGATTCACTTTGCAATTTCTGGTTTTATTGGCTTT TGTGTGTGTATGTTGGTGTTTGGCTGAAATGGTTAATCAGGGGAAAAATGAATCACGTGCACCCTTTCTTTAATTTCAGT TCAAGAGTTGCTGTTGAAAGAGGACTAAAATATAAGAAAATGAAAACATTTTGAAACAGGGAACCAAATGATGTACAGTA GAACTATGTTATCAAATTGATGCCTTTGAGATTCAAGCATTTGATGTCTGTTTTTTAGTTAAGGGGACTATCTTTTTTTA GGGAATAATTTGATTTCAGCAAAGCTAGTACTAATTGTTTGTTGTTTTGTTCTTGGATATCCTTGTAGGAAACTTCATCT GCACAGTATATATTGCAGCAGTACACTGCTGCATCTGGAGGGCAGAAGTTGCAGAACTCTATAAAAAATTCATATGCAAT GGGAAAGGTTCGAATGGTAGCTTCTGAGTTCGAAACTGCGACAAGGGTAGTGAAGAATCGGAATGTTTCTAGGTGTGCAG AGTCTGGTGGATTTGTGCTGTGGCAGATGAATCCTGACATGTGGTATGTAGAGCTTGCAGTTGGGGGCAGCAAGGTTCAT GCTGGCTGCAATGGAAAGCTTGTCTGGAGGCACACACCTTGGCTAGGTGCTCACACAGCAAAGGGACCTGTGAGGCCTTT GCGGCGTGCACTTCAGGTTGGACTTTGTTTCCTAATTTCCCCGCAGCACATGTGCCATTTGTGTTTTCATCAAGTCTTAT GTTCCATTTTTATTTCTGATTTTTAATATGTTTATATTTGTTTAATTAGGGTCTTGACCCTAGAACCACCGCCAGTATGT TTGCTGATTCTAGATGCATTGGAGAGAAGAACATCAATGGTGAGGATTGCTTCATCCTTAAGCTCTGTACTGATCCTGAA ACATTGAAGGCTCGGAGCGAGGGCCCTGCTGAGATCATAAGGCATGTGTTATTTGGCTACTTTAGCCAAAAGACCGGACT GCTTGTTCACATTGAGGATTCTCATCTGACCCGCATCCAAACTAATGGAGGTGATGCGGTTTATTGGGAAACCACAATCA ATTCATTCCTTGATGACTACAGGCCTGTGGAAGGGATCATGATTGCCCACTCAGGGCATTCTGTGGTAACTCTGTTCAGG TTTGGGGAGATGGCCATGAGCCACACTAAAACCAGAATGGAAGAAGCTTGGACGATTGAAGAAGTCGCGTTCAACATTCC TGGCCTCTCTGTAGATTGCTTCATTCCCCCAGCTGATCTGAGTACAGGTTGTATCAGTGAAGCCTGTGAACTCCCTCAGA ATGAAAAAGCAAAGAACTCACTAGCAGGACACCGGACCAAGGTTGTTGCCCTGGAGAAACAGCATAATTGCAACATTGAT AACATGATGTGGAACATGGAAATCTAACAGTGGGGTTAGGATCATCAATTCAAGGCAATTGTTAATAGCAGTTACTAGTT CTTGACTACTAACGTTTAGATTTTAGAGTAGGGGTTCAGTTGGTTCTTTGTGGAAGTTTGTTAATGCCTCTATACTCTGT AAATAGAGCATGAAAATTCACGGGTGTTATGCAGACCTGAGTGAATATTTATACTCGATGCAGAATCCAACTATGGAGTT GGAGCTCGTTGTTCCAATTCGGAACAGAGCAAATGGAGGTTAAATTTTTAGTTTACCTTCCATAAGCAAGGGAAGGTGGT GAAGCTTTGGTATAGTGGACCCATTAAACTTAGCAACTTATCTTAAATTCAGTGTCGGTGGTGGCGATATTAAAGAGGCT GCCGCCGGCCAGTCAAGTTTGACCCTAACAGCTTCTATGTGGGGTAGAAGTTCTGAATTCTGTGTTTGAAAGGGTAAAGA ATGGTGTTTTTGATACCTGGGAAAATGGAGTGGGGTTACTCTAAGACATTATACTCAGTCTTAATTCATGTGATGTACCC AAACATTTCTAATATTATCAGTAATATGTTTCATGTTGTGTTAAGATGGCTTCAGACCTTCAGTGATCCTTGAAATGAAA CTGTCAGTGTCATATAATGAATGCCGAGTTTTATGTCTCTCATCTTTACTGTTATATCTTCAAGCAGTTGATAAATTGTA CACAGTAACCATATTTTTCTTGTTTTTGTTTATTTTGCGTTTTTCACTAGAGCATATGGTATAAGAGATATCCTGAATTT AAGAATATAGTAATAATTTCCATGTTTCAGATCTTTATCCTGGTAGGCATGTGTGAAAGTCTCTCTATATCGCTGTCATG GTCAAATGAGGATAGGAAGTAAAATACTATATAAGTACTAGTAGAAATAAAGTAACAAAAGAGAACTCAGAATAAACAAA GTAAAATTGGTTTGGTTTTGTGATGAAAGGTTTAAGACCTGGGTGACAGCGTGTGTAAACGTGATTATGGAATGAGCATA CCACGAGGGAGGTTGGATGCTTCCAATGCCCCAAGTGAGGTAACCTAAGCTGCCAGCTTGCTTGGTTTCCCTTTCTTAGT TGCTTCCAGCCATTATTTTTTCCCCTCTCCCAAAGCAGTCAAAAAGATCTTAACATTCTTTTTTTCTGTTTATGTTCCTT CATCTTTTCTTCCTCCCTGATGGGATGGTTGGTTGGTTGGATCATGTTGTATATGGTGAATATTAATGCAATTGCTTGGC ACATTTTCATGATGTCTAGAGTGATTAATAAATCTGGAACCCTACCCTTCTGGATTTAACTCCT
CDS sequence (LotjaGi5g1v0325000.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAAGAAACAGGGTTTCTTCTCCGCTCTCAAACACGAGGTAGTTCGCGGCCTCTCACCTTCCCGTTCCCGTTCCAC CAGCCCCGCCCGAACCGCCTCACCCATCTCCACCCTCCTCCGTAGGAAAAAACACCTCGCCGCCCCCACCCTTGACTCCT CCGTCGCGAGATCCGGCAGCCTGAGGCCGCTAGGAGAGACTCTAACGCCTCTCATGGAGGGACCTGACCAGGAAAACGGG GACCCCAAACGGGTCGGGTCGGGTCTCGGAAACTGGATGAAGGGTCAGCTGTCTCGTACCCCCTCCGTCTCGTACAAGAG GTCTGATCTGAGGCTTCTGCTTGGTGTCATGGGTGCGCCGCTGGCTCCGCTTCATGTCTGCTCCACCGACCCTTTGCCTC ATCTCAGCATTAAGGACACACCCATCGAAACTTCATCTGCACAGTATATATTGCAGCAGTACACTGCTGCATCTGGAGGG CAGAAGTTGCAGAACTCTATAAAAAATTCATATGCAATGGGAAAGGTTCGAATGGTAGCTTCTGAGTTCGAAACTGCGAC AAGGGTAGTGAAGAATCGGAATGTTTCTAGGTGTGCAGAGTCTGGTGGATTTGTGCTGTGGCAGATGAATCCTGACATGT GGTATGTAGAGCTTGCAGTTGGGGGCAGCAAGGTTCATGCTGGCTGCAATGGAAAGCTTGTCTGGAGGCACACACCTTGG CTAGGTGCTCACACAGCAAAGGGACCTGTGAGGCCTTTGCGGCGTGCACTTCAGGGTCTTGACCCTAGAACCACCGCCAG TATGTTTGCTGATTCTAGATGCATTGGAGAGAAGAACATCAATGGTGAGGATTGCTTCATCCTTAAGCTCTGTACTGATC CTGAAACATTGAAGGCTCGGAGCGAGGGCCCTGCTGAGATCATAAGGCATGTGTTATTTGGCTACTTTAGCCAAAAGACC GGACTGCTTGTTCACATTGAGGATTCTCATCTGACCCGCATCCAAACTAATGGAGGTGATGCGGTTTATTGGGAAACCAC AATCAATTCATTCCTTGATGACTACAGGCCTGTGGAAGGGATCATGATTGCCCACTCAGGGCATTCTGTGGTAACTCTGT TCAGGTTTGGGGAGATGGCCATGAGCCACACTAAAACCAGAATGGAAGAAGCTTGGACGATTGAAGAAGTCGCGTTCAAC ATTCCTGGCCTCTCTGTAGATTGCTTCATTCCCCCAGCTGATCTGAGTACAGGTTGTATCAGTGAAGCCTGTGAACTCCC TCAGAATGAAAAAGCAAAGAACTCACTAGCAGGACACCGGACCAAGGTTGTTGCCCTGGAGAAACAGCATAATTGCAACA TTGATAACATGATGTGGAACATGGAAATCTAA
Protein sequence (LotjaGi5g1v0325000.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEKKQGFFSALKHEVVRGLSPSRSRSTSPARTASPISTLLRRKKHLAAPTLDSSVARSGSLRPLGETLTPLMEGPDQENG DPKRVGSGLGNWMKGQLSRTPSVSYKRSDLRLLLGVMGAPLAPLHVCSTDPLPHLSIKDTPIETSSAQYILQQYTAASGG QKLQNSIKNSYAMGKVRMVASEFETATRVVKNRNVSRCAESGGFVLWQMNPDMWYVELAVGGSKVHAGCNGKLVWRHTPW LGAHTAKGPVRPLRRALQGLDPRTTASMFADSRCIGEKNINGEDCFILKLCTDPETLKARSEGPAEIIRHVLFGYFSQKT GLLVHIEDSHLTRIQTNGGDAVYWETTINSFLDDYRPVEGIMIAHSGHSVVTLFRFGEMAMSHTKTRMEEAWTIEEVAFN IPGLSVDCFIPPADLSTGCISEACELPQNEKAKNSLAGHRTKVVALEKQHNCNIDNMMWNMEI
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 449 | 449 | 1.9E-257 | – | |
| PANTHER | 1 | 449 | 449 | 1.9E-257 | ||
| MobiDBLite | 16 | 93 | 78 | - | – | |
| MobiDBLite | 20 | 35 | 16 | - | – | |
| Pfam | 171 | 412 | 242 | 5.0E-121 | ||
| Coils | 429 | 449 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0325000.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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