Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
Field | Value |
---|---|
Gene ID | LotjaGi5g1v0333600 |
Transcript ID | LotjaGi5g1v0333600.1 |
Related isoforms 2 | |
Lotus japonicus genome version | Gifu v1.2 |
Description | Phosphatidylserine synthase 2; TAIR: AT1G15110.1 phosphatidyl serine synthase family protein; Swiss-Prot: sp|F4HXY7|PSS1_ARATH CDP-diacylglycerol--serine O-phosphatidyltransferase 1; TrEMBL-Plants: tr|A0A0S3SLY2|A0A0S3SLY2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0333600 |
Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65031695..65039518) extracted from Lotus japonicus Gifu genome v1.2.
GCAATTAATGAGAAGAGATAGGGACATTAGTGTCATGACAAGAAAATAAATGTTTGATTCATAAACACACACTGCATTGC ATTTGCATTTGTATTGGTCCATCAATTCTTCATCATCATCATCGTGCGTATCTAAAACACTCTCTCTTTCTTTGACCATC GTCGTACCTTCATCTCTCTCTCATCATCACCCTTTGTTCCCTTTTCTCTCTCTCTCTCCTCTCTCTCTCTGCTTTCTTCT TCTTCCTCCCAAAACCAAAACCAAAACATTCAACATTCAACAACAACATCCTTTGACCCCTTTCCCTGTCATCACTGCCA CTGCGAGAGAGAAAGAAAACCATCTCTCTCTCTCTCTATATATATATATATATATAGATTCATTGATTCATTCATTCATT ACCACCACAAAACAAAACAAACACTTATCTCTTCTTCTTCTTCTTCTTCACCTTCTTCTGCGATTTCAATTCATTCATTC ATTATTCAACGGCTGCGATCTTCTCGTTTCTCCAATCGTACGGCCAGGGGTCCTTTCTCTGCTACCTCTTTTTTTTTCTC TCTCTCTCTCTCTACGTAAGTATCATCATCATCATCATCACCATCACCATCTTCTTCTTCTTCTTCTGGAACAAATAACA AAAATATGCTAAGCTTTCATTTTTTCTTTCAATCACGATTCACACATCACTCTCACACACGACGCACTCATCTACTTGCT CCTCTCATTCAGTGTACGTCATTCATTCATTTCATTCCACCCTTTTTATTTTTATTTATTTTTTCCATTCTGGGGGAGTC TAATTCTTAGAAATTTGAAGAAAGTTTTGATTTTTGGTCCACCCCACTTGCCCATTCTACTTGATTCAGGGTTTGATCAG TTTTTGTTTCATTACATGCATCGGTTCTGTGTTCAATTATGCATTTTTATGTGATGGGTTTTCTTTGTTTTGGTTTCGGA TGCCAGATTTAGATCCATCTTGCTGCCATAACCGCCTTGGAAATTTAAATCTCTTTTATTTTATTTTTATGAAATGTATT CTATATATTTGTTTATTTGATTTTTGGAGTTGTTACTTATATAATATGTTTTTGTGGTAACCATTTTGTAAATTATGGTT TAATTCTGATATGCATGTGGGTGTCATCTGTGTTGAGTGTCCTCTTCTGTTGTTTGGGAATGCTATTTAGACTTGCATAA GGTTGTTGAGTACTATTGTACACTGTAGAATTTGAGGTGAACAGTTGAGCTCTCAGTCTACCGTGTTTACGAAAAATTAA ATGTTTTCACATTAAATTATCTGCCAGGCACTACCATGGGTTGCAAAGTTGGTGGATTTGTAAAAGTTTCTTGTTTGGTC TTCAATTTTGAACTCTATGATGGTTTATAGCATGTTTGGATCAACTTGTCTTTCCTCATAATCAATTCTAGCGCTAAAAG CTACTCACAAAAGCTTCTCCTCTGAATTGATTTTGACACTAGAATCAATTATAGAAAGATTTTCAAACATGCACTTAGTT ACGTTTATTGATAAATATATATTTTCATGGGATGAAGTGCTCATAAGTCATAACATGTAACTGAAATGCAGCAACACATG GATAGTTAGCAGAATCTTGTCAATGCTCCATGTAGTGTACTATATCAATATTTGGTGTGCTTTTTAGTTTTTGTTAACTA AGTGTCTGGTGTGCTAAATATATGATCTTTTTCATTTGACGGATTTCATTAGAAATTTTGAATTAAGTGTATGGATCTTT TGTAACAATTTGTTGTTGTGTGCTTCTTGGGAGTGATCTCTTGATGCCTATAGAGCTCTGGGGCTATTGCTCATATCATC TACAAATGATCTTATTTCTTTGATTTTGATTGTAGGTAGAAAGTAGCTTCTCCAGAACAATAAACATGGAGTCCAATGGT CATAGAAGAGCAAAGAAACATGACTATAATGTTAAAGAAAATGGTGATTCCCATTTGTCAAATGTTCATGATGAATTTGA TCCATGGACTGCATGGGCTTACAAGCCTCGTACAATCACATTATTACTCATTGGTGCTTGCTTTCTTATGTAAGTGCTGT CCTAGATAAGTTCATATAGTCAATAGTGTATTTTTACAAACTTGAATTTTGTTCTTTAATATATTTAATTTTCCCCACGT GATTTTTTTTATTTTATTGCATATGCTAGTTGGGCAAGTGGAGCACTTGATCCGGAAAGAGATGCATCCGGTGATGTTGT TACTTCCGTTAAAAGGTCTGGTATTTAGTTAATTAGTGCTCATATGGTTTATTTAGCATTTTACCATGTGTACAATTTGC TAAATGCCTTCACAATTGTTTTTCTGCAGGGGTGTATGGGCAATGATTGCTGTTTTTCTTGCTTACTGCTTGCTGCAAGC TCCTGATACGTGAGTAATCAGAGTGATTTTTAATTTTATTTTGGTGTAGTTTAGTATTTTTAATTTGCTTTAATGTTATT GGATGTATATATTAATCTTGTTGTCTTTTATTCTATTTTTATACTAAATTTAGCTGTCTGGTATATTTGTCAACTTTAGA TTTAGATCCAAAGTTTGTAAAGAGGTTTTCCTTATTTTCTCATATTTTCTGTGACTATACCTGATAGGGGATTCAGTATC TGATTCTTTAGTATGCGATTTAGGAGATGGTGTTTAAGAATTATTAGAGACTTTCTCAGCTGACATATTTCATATTTTTT TAACTAAGAGTTTACTTTTAGAAAATAAGTAACCCTTATGTATCACCATTTTAGAACATTATGTAAAAGTTCAAGTCATT TGAGATACTCAAGGTCTCATAGTTATGGATGTTAAGCTTTAGAGCTTTGGAGCAAAGGGAAATTGCTTTGCTGCTAGTGT ACTGGGAAGAAAAGCCACTGGAAAATGTTTCTTTTAGGGGTCGGGGTTAGAGAGAGAGAGAGAGAGAGAGGGAGATAGTG TATGTGAGAGGTATGGACATGTATGGAGAGAACTAAAAATCTGAAGTGTATATTTTTTTTTTCTGGTAGCATATTACATA CAAATTTTAACATGATCCTGCTTAAAATTGTTCTACTACATTATGAATTTGGATAATACTAACATAAATGACATGATAAT GTAAAAGAAGCTGATTATTGGCTCCTTCAGCTGAATTTGTACTGTCGTAGTAAATTTCGTCTGTTGAGAGTATTATTTGT ATAATTTTTTTTGTTTCTGTTTCCATTCAGGGTTCTTATTAGGCCACATCCTGCAATGTGGCGCATGGTTCATGGGATGG CTGTTGTTTACCTGGTTGCCCTCACATTCTTGCTTTTTCAGGTTGGTTATCAGGTCTTGGTTTGACAGTTCTTTTTTTTT TTTTTTTTGTAAATGAAATGAATTAATTAGATGCAATATAATTTCATTACATTTCAAATCTTAAAAATTAAAATACTCCA TTCAAAGACGCCAACAAAAATCTATCCTCAGTCTAGCCTTTACATATAGTCCCATGTTCTTGGAGTTCATCATTACCAAT GAACCCTACAGCAGTTCAACAAAAACCTTCAAAGCACACAACAAAACAGCAAAGTATATTATAGGCCCCCAAGTAATTCA ATCAGCTTCTTTACCTGAGACTCAATTTGAGCAAAACTTCTACCAGTGCAGTGCCTACACTCAAGGGCAATGCAGAGTAA TTTTAAACATGACCTTTACCATCCACATAAAAGTCAACCTTTGATTTCCATGCACTGGCAACACCATTGAGATACACCAG CTGTAGATATTCATCCAAAAAGTAGCCTAGCCCATCCACAACTTCAACACTTTATCCTTACCACCAGAGGCTACCTTCTC CCCATCAGGACTCCAATCAACAGAAAAAACTTCATCAGCATGGCCTGGAAGATCTTGCCTCAACTTACGAGTCCTAATAT CCCAAACCTTAAGTGTAGAGTCCTTGCTGCCACTTAGAATAAGTCTACTATCAGCAGACCAGCTGATCTGGTAAACCGGC CCAACATGGCCACGAAAGGCAGCAACAAATTTCCCCGTAGTGCCATTCCATAACTTCACAGATTTATCGAAAGATGCACT TGCCACCCATTGCCCATCAGGTGAAAAATAGACATGGTTTACAAGCTGCTGATGAGTGTATGTCAGTATAATATCTAATT CATACTTTTAAAATTTCATACATTTTTCTGGTGCATCTTTGCACTTTATTTTGCATGCTTTCTAGATTTGCATCTGTTAA CAACATCCTCCGTAATTTGTTGCTCTGTTTCCGGCAAGTGAATGGAAATGGACTAATTTATATTCTTAATCTTTTCTTTT CCCCACAGAAGCGTGATGATGCTCGGCAGTTTATGAAGTTTCTTCATGGTGATCTTGGAGTTGGTAATTCAATCTGATTC CTATTAGTTTAGCTTTGAATTCGTTGGAATTAATTCATTATGAATTTGAGTTGTATTTGTGATTTAAAATGGTTAGCTGG TTACAGATCAGTTTGTTACATTGTTTCTAAATTTGTTATTACTTTGTATGACTTTGCAGAACTTGGAGTTGGTAATTCAA TCTGATTCCTTTTAGTTTAGCTTCGAATTCGTTGGAATTAATTCATTATGAATTTGAGTTGTCTTTGTGATTTAAAAAGG TTAGCTGGTTATGGATCAGTTTGTTACCTTGTTTCTAAATTTGTTATTACTTTGTATGACTTTGCAGAACTTCCTGAAAG ATCTTATGGTGCCGATTGCCGCATATATCTTCCTGATAACCCTACGAGCAGGTTTAAGAATGTTTATGTATGATTTCTTC TTTCACAACCTTGTGGTTTTGGCAGTTTTCTCCAAATATCAGTTTATTCTTTGCTTTATCATATTTTGATCTAACACAGG TTATATGTTATGCTTCAATTTTCAGGAGACACTTTTTGATGAGTTTGTTCTTGCTCACATTATTGGGTGGTGGGGGAAGG CCATATTGATTCGTAATCAGCCCCTTCTTTGGGTGTTATCAATTGGTTTTGAGTGTATGGAGGTTAGCCCTGATCTTAAT AATAAACTCTATGGTTTTTCATATATGTTTAGTTGTGAGTTAGTTTATCAATAAAGCTTCTCTTTTTTCTTGTTTCGGTT TATATATTCTGTATTGTTTACAAACCATTCTATATTGGCATTTTCAGTTTACTTTTCGTCACATGTTACCAAATTTCAAC GAGTGCTGGTGGGACAGTATTATTCTTGACATCTTCATCTGCAATTGGTTTGGTAAGAGTCTTGGATCAATTTTTATTCA ACTTTTTGGAAAGTTGCCAGGTTGCATGTGGTTTATTAGTTGAAGCATGAACATAGGTATTATATCATCATGCCAAAAAT AGGTTTCAATGGAATGCATTTTAAAAATTTCGAAACCAGGGAGCCCCACAAATGCAATTTGCAAAAGCTTGTAGGACACT AATACTGGTCAATGTATCTTTACTTTAAATTTTAAAGGTGGATGGAATTGTGTATTTGCTTTTATCTTGGATGAAAATTC TTGCATTGAATTTCATACAATTGTTAAGAATTTGAATTGAATTATCTGATCTCTCCTCCTCCTGCCCTTCCCCTAGAAAC TAGAAAGCTACATGACTCAGTTTTTTGATGCGAGTCTAGTATATATATTTTTTCGCATTATTTTGTAGTTTATTCCTCCT GGGGTTAAAATTGTTAGAGCTGATTGTGACATTTTTTTTTACTTGGAATATGCAGGAATTTGGGCAGGAATGCGTACTGT TCGGTACTTTGATGGGAAAACATACAACTGGGTTGGCTTAAGCCGCCAACCTAATATAATGGGAAAAGTATGTTTTCTGA TTTATTTTCTTCTCATCACTCACCCGTTTTTCCATTATGCTTGAATCTGTAATTTCCATTGAAACTGAAATCACAGTAAC CTCTATAATACTTTTCCTTTGCCTATTGGATCAATAGGGAATATTGATAAATATGTAACTAGTACAGTCCTTCCACTTTC ACCATGTGAAAAAAGTGAATCAACTTTGACAGAATGTGTAGTTAATTTTCTGTTGCTCTTAATTTGTTATCATTGCTAAG AAGACATATGTGACTTAGTGCTCTTCGCTACTCTTTCATTGTTATTAGGTGAAACGAACATTAAGCCAATTCACCCCCGC TCAGTGGGACAAAGATGAGTGGCATCCATTGCTTGGTCCATGGCGTTTTGTTCAAGTCCTCAGTCTTTGCACTGTATTTT TGACAGTAGAGCTCAACACATTCTTTTTGAAGTTTTCTCTGTGGATACCGCCACGAAATTCAGTTGTTATATATAGGTTG ATTTTGTGGTGGCTACTTGCGATTCCAACTATTCGCGAGTACAATTCATACCTTCAAGATAGGTACATTGTCCATCTCTC TAGTTTCATTGACAAATAAAATAGTATTCAATTGTTCTATTTGCCCGTTCAGAATTGTTATACTGCCTACTCCAGTTATC TATCGTTCATTTTGCATAATGTCTTAAATTTTCGTCCCCCTCCTAGACATTTTTTCTGGTTCCGTTCAGGGTGGAATTGA AGCATCCTAATGAATTCTTAGCATTTTATCTAATCATGTGTTCTTTGTGAAATTTTCAGGACGCCAGTGAAAAAGGTTGG AGCATATTGTTGGTTGTCCCTTGCCATTTGCATTGTAGAACTTCTGATTTGCATAAAGTTTGGACATGGTAAGTTTCCTA ATATGTGATATGTCATGTTAATGTTTATTAATGTATGGATGATATTTGATTAACTGATTACTCTCACTCATTGTGTTTCC ACAGGGTTGTATCCTAAGCCAATGCCTTTATGGCTAGTAATCTTTTGGTCATCTATAGGAGTGGCTATTTTTACATTTTT GGTTTTGTGGTCTTGGCAAATCCATCGGAGTCTTGGGAAAAAGAGGCGATGAGTTCCTGTTGTTGTGGTGCATTATTCTT TCATTCCTTGTTAATTTTTATGGGTATTCATAGTAGCCATACATGGTGTAAATACTATTATCAACCTCATAATTGTAAAT GCCTACGTGATGAGTCTTCTAGGGTAGTGGATCAAAGGTTGTTTCAGCGGCAATTTTAATTTCTTACTATTTGAATAGGT TTCTTCCATTATTAGTAAATTGGTCAATTTCATTGCCTTGAATGAAATTTTGAATGAAATCACGTGTATACATTGATTTT CTGCAATTATGTATGGCGAGTTTCATCACCCTGACTATGTTCTCTCAAAATTTTGTCCACATTTTATGTCACGAATCACT CTAGGTCCCCGACCGGAACATAGTAGACTAGTAGTAAATTAGTAATCTAACTCTCAACTAGTCTATCAAATCTAATGACA GAACCACACGAAGGATACATAATTTGAAATAAAATTAGTTATATGGAGTTTTCTTTGTACTTTCAACTAATCCAAAATAA GAAATATTTTGTCAAAAATATATATCAAAATCCCATCAACCAAATACTCACACCAAATAATTAGAATAACTAACTGTGAC GGTGTAACTATTTTGTATACGGTTAACCAATAAGATTTTAAAAATATGTCGTGTAAAAAACTATATGTTTAAGATTTGTT GATAAGATTTGTTGATAGCATATCATAGTGTGCGAAGGAGAAGGTGGGCCTCTTAATTTGAGATGTACACCAACTGGCAC ACCAGAGGTGCGTCCTTCCCGATCCTCTCGTACTAGGGAAAGGTCCTCTCAATGCTCTAACGCCCACACCGGATATGGAC CGAACTGTCTCACGACGTTCTGAACCTAGCTCACGTACCGCTTTAATAGGTCTAGCATCTAATT
CDS sequence (LotjaGi5g1v0333600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCCAATGGTCATAGAAGAGCAAAGAAACATGACTATAATGTTAAAGAAAATGGTGATTCCCATTTGTCAAATGT TCATGATGAATTTGATCCATGGACTGCATGGGCTTACAAGCCTCGTACAATCACATTATTACTCATTGGTGCTTGCTTTC TTATTTGGGCAAGTGGAGCACTTGATCCGGAAAGAGATGCATCCGGTGATGTTGTTACTTCCGTTAAAAGGGGTGTATGG GCAATGATTGCTGTTTTTCTTGCTTACTGCTTGCTGCAAGCTCCTGATACGGTTCTTATTAGGCCACATCCTGCAATGTG GCGCATGGTTCATGGGATGGCTGTTGTTTACCTGGTTGCCCTCACATTCTTGCTTTTTCAGAAGCGTGATGATGCTCGGC AGTTTATGAAGTTTCTTCATGGTGATCTTGGAGTTGAACTTCCTGAAAGATCTTATGGTGCCGATTGCCGCATATATCTT CCTGATAACCCTACGAGCAGGTTTAAGAATGTTTATGAGACACTTTTTGATGAGTTTGTTCTTGCTCACATTATTGGGTG GTGGGGGAAGGCCATATTGATTCGTAATCAGCCCCTTCTTTGGGTGTTATCAATTGGTTTTGAGTGTATGGAGTTTACTT TTCGTCACATGTTACCAAATTTCAACGAGTGCTGGTGGGACAGTATTATTCTTGACATCTTCATCTGCAATTGGTTTGGA ATTTGGGCAGGAATGCGTACTGTTCGGTACTTTGATGGGAAAACATACAACTGGGTTGGCTTAAGCCGCCAACCTAATAT AATGGGAAAAGTGAAACGAACATTAAGCCAATTCACCCCCGCTCAGTGGGACAAAGATGAGTGGCATCCATTGCTTGGTC CATGGCGTTTTGTTCAAGTCCTCAGTCTTTGCACTGTATTTTTGACAGTAGAGCTCAACACATTCTTTTTGAAGTTTTCT CTGTGGATACCGCCACGAAATTCAGTTGTTATATATAGGTTGATTTTGTGGTGGCTACTTGCGATTCCAACTATTCGCGA GTACAATTCATACCTTCAAGATAGGACGCCAGTGAAAAAGGTTGGAGCATATTGTTGGTTGTCCCTTGCCATTTGCATTG TAGAACTTCTGATTTGCATAAAGTTTGGACATGGGTTGTATCCTAAGCCAATGCCTTTATGGCTAGTAATCTTTTGGTCA TCTATAGGAGTGGCTATTTTTACATTTTTGGTTTTGTGGTCTTGGCAAATCCATCGGAGTCTTGGGAAAAAGAGGCGATG A
Protein sequence (LotjaGi5g1v0333600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESNGHRRAKKHDYNVKENGDSHLSNVHDEFDPWTAWAYKPRTITLLLIGACFLIWASGALDPERDASGDVVTSVKRGVW AMIAVFLAYCLLQAPDTVLIRPHPAMWRMVHGMAVVYLVALTFLLFQKRDDARQFMKFLHGDLGVELPERSYGADCRIYL PDNPTSRFKNVYETLFDEFVLAHIIGWWGKAILIRNQPLLWVLSIGFECMEFTFRHMLPNFNECWWDSIILDIFICNWFG IWAGMRTVRYFDGKTYNWVGLSRQPNIMGKVKRTLSQFTPAQWDKDEWHPLLGPWRFVQVLSLCTVFLTVELNTFFLKFS LWIPPRNSVVIYRLILWWLLAIPTIREYNSYLQDRTPVKKVGAYCWLSLAICIVELLICIKFGHGLYPKPMPLWLVIFWS SIGVAIFTFLVLWSWQIHRSLGKKRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
---|---|---|---|---|---|---|
PANTHER | 1 | 425 | 425 | 2.2E-255 | – | |
PANTHER | 1 | 425 | 425 | 2.2E-255 | – | |
Phobius | 1 | 38 | 38 | - | – | |
Phobius | 39 | 57 | 19 | - | – | |
Phobius | 58 | 77 | 20 | - | – | |
TMHMM | 78 | 100 | 23 | - | – | |
Phobius | 78 | 94 | 17 | - | – | |
Phobius | 95 | 105 | 11 | - | – | |
Pfam | 102 | 383 | 282 | 7.3E-108 | ||
TMHMM | 105 | 127 | 23 | - | – | |
Phobius | 106 | 126 | 21 | - | – | |
Phobius | 127 | 198 | 72 | - | – | |
Phobius | 199 | 218 | 20 | - | – | |
Phobius | 219 | 223 | 5 | - | – | |
TMHMM | 224 | 246 | 23 | - | – | |
Phobius | 224 | 245 | 22 | - | – | |
Phobius | 246 | 299 | 54 | - | – | |
TMHMM | 295 | 317 | 23 | - | – | |
Phobius | 300 | 323 | 24 | - | – | |
Phobius | 324 | 328 | 5 | - | – | |
Phobius | 329 | 349 | 21 | - | – | |
Phobius | 350 | 360 | 11 | - | – | |
TMHMM | 361 | 383 | 23 | - | – | |
Phobius | 361 | 387 | 27 | - | – | |
Phobius | 388 | 392 | 5 | - | – | |
Phobius | 393 | 415 | 23 | - | – | |
TMHMM | 393 | 415 | 23 | - | – | |
Phobius | 416 | 426 | 11 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
GO term | Namespace | Name | Definition | Relationships |
---|---|---|---|---|
Biological process | Phosphatidylserine biosynthetic process | The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. |
Expression pattern of LotjaGi5g1v0333600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…