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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0333600 |
| Transcript ID | LotjaGi5g1v0333600.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidylserine synthase 2; TAIR: AT1G15110.1 phosphatidyl serine synthase family protein; Swiss-Prot: sp|F4HXY7|PSS1_ARATH CDP-diacylglycerol--serine O-phosphatidyltransferase 1; TrEMBL-Plants: tr|A0A0S3SLY2|A0A0S3SLY2_PHAAN Uncharacterized protein; Found in the gene: LotjaGi5g1v0333600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65032587..65037673) extracted from Lotus japonicus Gifu genome v1.2.
ATGATCTTATTTCTTTGATTTTGATTGTAGGTAGAAAGTAGCTTCTCCAGAACAATAAACATGGAGTCCAATGGTCATAG AAGAGCAAAGAAACATGACTATAATGTTAAAGAAAATGGTGATTCCCATTTGTCAAATGTTCATGATGAATTTGATCCAT GGACTGCATGGGCTTACAAGCCTCGTACAATCACATTATTACTCATTGGTGCTTGCTTTCTTATGTAAGTGCTGTCCTAG ATAAGTTCATATAGTCAATAGTGTATTTTTACAAACTTGAATTTTGTTCTTTAATATATTTAATTTTCCCCACGTGATTT TTTTTATTTTATTGCATATGCTAGTTGGGCAAGTGGAGCACTTGATCCGGAAAGAGATGCATCCGGTGATGTTGTTACTT CCGTTAAAAGGTCTGGTATTTAGTTAATTAGTGCTCATATGGTTTATTTAGCATTTTACCATGTGTACAATTTGCTAAAT GCCTTCACAATTGTTTTTCTGCAGGGGTGTATGGGCAATGATTGCTGTTTTTCTTGCTTACTGCTTGCTGCAAGCTCCTG ATACGTGAGTAATCAGAGTGATTTTTAATTTTATTTTGGTGTAGTTTAGTATTTTTAATTTGCTTTAATGTTATTGGATG TATATATTAATCTTGTTGTCTTTTATTCTATTTTTATACTAAATTTAGCTGTCTGGTATATTTGTCAACTTTAGATTTAG ATCCAAAGTTTGTAAAGAGGTTTTCCTTATTTTCTCATATTTTCTGTGACTATACCTGATAGGGGATTCAGTATCTGATT CTTTAGTATGCGATTTAGGAGATGGTGTTTAAGAATTATTAGAGACTTTCTCAGCTGACATATTTCATATTTTTTTAACT AAGAGTTTACTTTTAGAAAATAAGTAACCCTTATGTATCACCATTTTAGAACATTATGTAAAAGTTCAAGTCATTTGAGA TACTCAAGGTCTCATAGTTATGGATGTTAAGCTTTAGAGCTTTGGAGCAAAGGGAAATTGCTTTGCTGCTAGTGTACTGG GAAGAAAAGCCACTGGAAAATGTTTCTTTTAGGGGTCGGGGTTAGAGAGAGAGAGAGAGAGAGAGGGAGATAGTGTATGT GAGAGGTATGGACATGTATGGAGAGAACTAAAAATCTGAAGTGTATATTTTTTTTTTCTGGTAGCATATTACATACAAAT TTTAACATGATCCTGCTTAAAATTGTTCTACTACATTATGAATTTGGATAATACTAACATAAATGACATGATAATGTAAA AGAAGCTGATTATTGGCTCCTTCAGCTGAATTTGTACTGTCGTAGTAAATTTCGTCTGTTGAGAGTATTATTTGTATAAT TTTTTTTGTTTCTGTTTCCATTCAGGGTTCTTATTAGGCCACATCCTGCAATGTGGCGCATGGTTCATGGGATGGCTGTT GTTTACCTGGTTGCCCTCACATTCTTGCTTTTTCAGGTTGGTTATCAGGTCTTGGTTTGACAGTTCTTTTTTTTTTTTTT TTTGTAAATGAAATGAATTAATTAGATGCAATATAATTTCATTACATTTCAAATCTTAAAAATTAAAATACTCCATTCAA AGACGCCAACAAAAATCTATCCTCAGTCTAGCCTTTACATATAGTCCCATGTTCTTGGAGTTCATCATTACCAATGAACC CTACAGCAGTTCAACAAAAACCTTCAAAGCACACAACAAAACAGCAAAGTATATTATAGGCCCCCAAGTAATTCAATCAG CTTCTTTACCTGAGACTCAATTTGAGCAAAACTTCTACCAGTGCAGTGCCTACACTCAAGGGCAATGCAGAGTAATTTTA AACATGACCTTTACCATCCACATAAAAGTCAACCTTTGATTTCCATGCACTGGCAACACCATTGAGATACACCAGCTGTA GATATTCATCCAAAAAGTAGCCTAGCCCATCCACAACTTCAACACTTTATCCTTACCACCAGAGGCTACCTTCTCCCCAT CAGGACTCCAATCAACAGAAAAAACTTCATCAGCATGGCCTGGAAGATCTTGCCTCAACTTACGAGTCCTAATATCCCAA ACCTTAAGTGTAGAGTCCTTGCTGCCACTTAGAATAAGTCTACTATCAGCAGACCAGCTGATCTGGTAAACCGGCCCAAC ATGGCCACGAAAGGCAGCAACAAATTTCCCCGTAGTGCCATTCCATAACTTCACAGATTTATCGAAAGATGCACTTGCCA CCCATTGCCCATCAGGTGAAAAATAGACATGGTTTACAAGCTGCTGATGAGTGTATGTCAGTATAATATCTAATTCATAC TTTTAAAATTTCATACATTTTTCTGGTGCATCTTTGCACTTTATTTTGCATGCTTTCTAGATTTGCATCTGTTAACAACA TCCTCCGTAATTTGTTGCTCTGTTTCCGGCAAGTGAATGGAAATGGACTAATTTATATTCTTAATCTTTTCTTTTCCCCA CAGAAGCGTGATGATGCTCGGCAGTTTATGAAGTTTCTTCATGGTGATCTTGGAGTTGGTAATTCAATCTGATTCCTATT AGTTTAGCTTTGAATTCGTTGGAATTAATTCATTATGAATTTGAGTTGTATTTGTGATTTAAAATGGTTAGCTGGTTACA GATCAGTTTGTTACATTGTTTCTAAATTTGTTATTACTTTGTATGACTTTGCAGAACTTGGAGTTGGTAATTCAATCTGA TTCCTTTTAGTTTAGCTTCGAATTCGTTGGAATTAATTCATTATGAATTTGAGTTGTCTTTGTGATTTAAAAAGGTTAGC TGGTTATGGATCAGTTTGTTACCTTGTTTCTAAATTTGTTATTACTTTGTATGACTTTGCAGAACTTCCTGAAAGATCTT ATGGTGCCGATTGCCGCATATATCTTCCTGATAACCCTACGAGCAGGTTTAAGAATGTTTATGTATGATTTCTTCTTTCA CAACCTTGTGGTTTTGGCAGTTTTCTCCAAATATCAGTTTATTCTTTGCTTTATCATATTTTGATCTAACACAGGTTATA TGTTATGCTTCAATTTTCAGGAGACACTTTTTGATGAGTTTGTTCTTGCTCACATTATTGGGTGGTGGGGGAAGGCCATA TTGATTCGTAATCAGCCCCTTCTTTGGGTGTTATCAATTGGTTTTGAGTGTATGGAGGTTAGCCCTGATCTTAATAATAA ACTCTATGGTTTTTCATATATGTTTAGTTGTGAGTTAGTTTATCAATAAAGCTTCTCTTTTTTCTTGTTTCGGTTTATAT ATTCTGTATTGTTTACAAACCATTCTATATTGGCATTTTCAGTTTACTTTTCGTCACATGTTACCAAATTTCAACGAGTG CTGGTGGGACAGTATTATTCTTGACATCTTCATCTGCAATTGGTTTGGTAAGAGTCTTGGATCAATTTTTATTCAACTTT TTGGAAAGTTGCCAGGTTGCATGTGGTTTATTAGTTGAAGCATGAACATAGGTATTATATCATCATGCCAAAAATAGGTT TCAATGGAATGCATTTTAAAAATTTCGAAACCAGGGAGCCCCACAAATGCAATTTGCAAAAGCTTGTAGGACACTAATAC TGGTCAATGTATCTTTACTTTAAATTTTAAAGGTGGATGGAATTGTGTATTTGCTTTTATCTTGGATGAAAATTCTTGCA TTGAATTTCATACAATTGTTAAGAATTTGAATTGAATTATCTGATCTCTCCTCCTCCTGCCCTTCCCCTAGAAACTAGAA AGCTACATGACTCAGTTTTTTGATGCGAGTCTAGTATATATATTTTTTCGCATTATTTTGTAGTTTATTCCTCCTGGGGT TAAAATTGTTAGAGCTGATTGTGACATTTTTTTTTACTTGGAATATGCAGGAATTTGGGCAGGAATGCGTACTGTTCGGT ACTTTGATGGGAAAACATACAACTGGGTTGGCTTAAGCCGCCAACCTAATATAATGGGAAAAGTATGTTTTCTGATTTAT TTTCTTCTCATCACTCACCCGTTTTTCCATTATGCTTGAATCTGTAATTTCCATTGAAACTGAAATCACAGTAACCTCTA TAATACTTTTCCTTTGCCTATTGGATCAATAGGGAATATTGATAAATATGTAACTAGTACAGTCCTTCCACTTTCACCAT GTGAAAAAAGTGAATCAACTTTGACAGAATGTGTAGTTAATTTTCTGTTGCTCTTAATTTGTTATCATTGCTAAGAAGAC ATATGTGACTTAGTGCTCTTCGCTACTCTTTCATTGTTATTAGGTGAAACGAACATTAAGCCAATTCACCCCCGCTCAGT GGGACAAAGATGAGTGGCATCCATTGCTTGGTCCATGGCGTTTTGTTCAAGTCCTCAGTCTTTGCACTGTATTTTTGACA GTAGAGCTCAACACATTCTTTTTGAAGTTTTCTCTGTGGATACCGCCACGAAATTCAGTTGTTATATATAGGTTGATTTT GTGGTGGCTACTTGCGATTCCAACTATTCGCGAGTACAATTCATACCTTCAAGATAGGTACATTGTCCATCTCTCTAGTT TCATTGACAAATAAAATAGTATTCAATTGTTCTATTTGCCCGTTCAGAATTGTTATACTGCCTACTCCAGTTATCTATCG TTCATTTTGCATAATGTCTTAAATTTTCGTCCCCCTCCTAGACATTTTTTCTGGTTCCGTTCAGGGTGGAATTGAAGCAT CCTAATGAATTCTTAGCATTTTATCTAATCATGTGTTCTTTGTGAAATTTTCAGGACGCCAGTGAAAAAGGTTGGAGCAT ATTGTTGGTTGTCCCTTGCCATTTGCATTGTAGAACTTCTGATTTGCATAAAGTTTGGACATGGTAAGTTTCCTAATATG TGATATGTCATGTTAATGTTTATTAATGTATGGATGATATTTGATTAACTGATTACTCTCACTCATTGTGTTTCCACAGG GTTGTATCCTAAGCCAATGCCTTTATGGCTAGTAATCTTTTGGTCATCTATAGGAGTGGCTATTTTTACATTTTTGGTTT TGTGGTCTTGGCAAATCCATCGGAGTCTTGGGAAAAAGAGGCGATGA
CDS sequence (LotjaGi5g1v0333600.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGTCCAATGGTCATAGAAGAGCAAAGAAACATGACTATAATGTTAAAGAAAATGGTGATTCCCATTTGTCAAATGT TCATGATGAATTTGATCCATGGACTGCATGGGCTTACAAGCCTCGTACAATCACATTATTACTCATTGGTGCTTGCTTTC TTATTTGGGCAAGTGGAGCACTTGATCCGGAAAGAGATGCATCCGGTGATGTTGTTACTTCCGTTAAAAGGGGTGTATGG GCAATGATTGCTGTTTTTCTTGCTTACTGCTTGCTGCAAGCTCCTGATACGGTTCTTATTAGGCCACATCCTGCAATGTG GCGCATGGTTCATGGGATGGCTGTTGTTTACCTGGTTGCCCTCACATTCTTGCTTTTTCAGAAGCGTGATGATGCTCGGC AGTTTATGAAGTTTCTTCATGGTGATCTTGGAGTTGAACTTCCTGAAAGATCTTATGGTGCCGATTGCCGCATATATCTT CCTGATAACCCTACGAGCAGGTTTAAGAATGTTTATGAGACACTTTTTGATGAGTTTGTTCTTGCTCACATTATTGGGTG GTGGGGGAAGGCCATATTGATTCGTAATCAGCCCCTTCTTTGGGTGTTATCAATTGGTTTTGAGTGTATGGAGTTTACTT TTCGTCACATGTTACCAAATTTCAACGAGTGCTGGTGGGACAGTATTATTCTTGACATCTTCATCTGCAATTGGTTTGGA ATTTGGGCAGGAATGCGTACTGTTCGGTACTTTGATGGGAAAACATACAACTGGGTTGGCTTAAGCCGCCAACCTAATAT AATGGGAAAAGTGAAACGAACATTAAGCCAATTCACCCCCGCTCAGTGGGACAAAGATGAGTGGCATCCATTGCTTGGTC CATGGCGTTTTGTTCAAGTCCTCAGTCTTTGCACTGTATTTTTGACAGTAGAGCTCAACACATTCTTTTTGAAGTTTTCT CTGTGGATACCGCCACGAAATTCAGTTGTTATATATAGGTTGATTTTGTGGTGGCTACTTGCGATTCCAACTATTCGCGA GTACAATTCATACCTTCAAGATAGGACGCCAGTGAAAAAGGTTGGAGCATATTGTTGGTTGTCCCTTGCCATTTGCATTG TAGAACTTCTGATTTGCATAAAGTTTGGACATGGGTTGTATCCTAAGCCAATGCCTTTATGGCTAGTAATCTTTTGGTCA TCTATAGGAGTGGCTATTTTTACATTTTTGGTTTTGTGGTCTTGGCAAATCCATCGGAGTCTTGGGAAAAAGAGGCGATG A
Protein sequence (LotjaGi5g1v0333600.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESNGHRRAKKHDYNVKENGDSHLSNVHDEFDPWTAWAYKPRTITLLLIGACFLIWASGALDPERDASGDVVTSVKRGVW AMIAVFLAYCLLQAPDTVLIRPHPAMWRMVHGMAVVYLVALTFLLFQKRDDARQFMKFLHGDLGVELPERSYGADCRIYL PDNPTSRFKNVYETLFDEFVLAHIIGWWGKAILIRNQPLLWVLSIGFECMEFTFRHMLPNFNECWWDSIILDIFICNWFG IWAGMRTVRYFDGKTYNWVGLSRQPNIMGKVKRTLSQFTPAQWDKDEWHPLLGPWRFVQVLSLCTVFLTVELNTFFLKFS LWIPPRNSVVIYRLILWWLLAIPTIREYNSYLQDRTPVKKVGAYCWLSLAICIVELLICIKFGHGLYPKPMPLWLVIFWS SIGVAIFTFLVLWSWQIHRSLGKKRR
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 425 | 425 | 2.2E-255 | – | |
| PANTHER | 1 | 425 | 425 | 2.2E-255 | – | |
| Phobius | 1 | 38 | 38 | - | – | |
| Phobius | 39 | 57 | 19 | - | – | |
| Phobius | 58 | 77 | 20 | - | – | |
| TMHMM | 78 | 100 | 23 | - | – | |
| Phobius | 78 | 94 | 17 | - | – | |
| Phobius | 95 | 105 | 11 | - | – | |
| Pfam | 102 | 383 | 282 | 7.3E-108 | ||
| TMHMM | 105 | 127 | 23 | - | – | |
| Phobius | 106 | 126 | 21 | - | – | |
| Phobius | 127 | 198 | 72 | - | – | |
| Phobius | 199 | 218 | 20 | - | – | |
| Phobius | 219 | 223 | 5 | - | – | |
| TMHMM | 224 | 246 | 23 | - | – | |
| Phobius | 224 | 245 | 22 | - | – | |
| Phobius | 246 | 299 | 54 | - | – | |
| TMHMM | 295 | 317 | 23 | - | – | |
| Phobius | 300 | 323 | 24 | - | – | |
| Phobius | 324 | 328 | 5 | - | – | |
| Phobius | 329 | 349 | 21 | - | – | |
| Phobius | 350 | 360 | 11 | - | – | |
| TMHMM | 361 | 383 | 23 | - | – | |
| Phobius | 361 | 387 | 27 | - | – | |
| Phobius | 388 | 392 | 5 | - | – | |
| Phobius | 393 | 415 | 23 | - | – | |
| TMHMM | 393 | 415 | 23 | - | – | |
| Phobius | 416 | 426 | 11 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Phosphatidylserine biosynthetic process | The chemical reactions and pathways resulting in the formation of phosphatidylserines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of L-serine. |
Expression pattern of LotjaGi5g1v0333600.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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