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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0335100 |
| Transcript ID | LotjaGi5g1v0335100.1 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amino acid permease; TAIR: AT2G01170.1 bidirectional amino acid transporter 1; Swiss-Prot: sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1; TrEMBL-Plants: tr|I1LES0|I1LES0_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0335100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65209078..65215117) extracted from Lotus japonicus Gifu genome v1.2.
TTGACTTTGACTTTGACTTTGACTTGATATCATTCAGTTAGGACAAAAGAAAGGAGGGAAAGAAAGATACATAATGCTAA GTTATTTTATGTTAATTTGACAAAAACCAACAACTTTTGACAATTTTGCTTGTGTTTCTTTACTGTAAGCTAGATCATGG ACTCTGCTAAAGAAAACATGACACTCCCATCTCATGTGCTTGCAAATGGTGATACTTCACTTGATTCTGGGCATGCCCGT CTTGTTGAACTTGGTTACAAACAAGAGCTCAAGCGTGATCTTTCGTTAAGTTCTCTTCTTTCTTCTTTTTAAGTTTTCTT TTTCAATTTCTGTTTGGATATATTGAAGTTGTTGCTGTTTTTGACTGGTTCCTTCATTTTACAATTGCAGGGTCATTGCA AATTTCTCCCTTTCATTCTCTATTTTATCAGTGCTTACTGGAGTAACCACCCTTTACAACACCGGGTTGAACTATGGTGG AACTGTTTCTTTCGTGTATGGCTGGCTTCTAGCTTCTGCATTCACCATGCTTGTTGCACTGTCAATGGCTGAGATTTGCT CATCTTATCCAACATCTGGTGGTCTTTACTATTGGAGTGCCAAGCTTGCTGGCCCTGAATGGGCACCTTTTGCTTCCTGG ATTACTGGCTGGTACTGTAACTCCCTGCTTTTTCTCCATTGTATTTTTCAACTAGGACTATTTCATTCCTTGTTTGTAAG TGTTAGAATTGACTCTCCACTGTCAAAACCAATTATGGAATGAAGCTACAACGTTTGCTTCTGCGGTGAATATAGTTAAT TGTAGGATTTTACAACTGGATTTCATAACATTACCCTACAAAAAACACTTTTCTAATACTCAAACATGAATCACTTTGCT TTTGATTCACTTTTATTTATCATAATCAATGTTACTAAAATCAATTCTAACAACGCTGATCCAAACAGACACTAAGAAAG AAGTACCATTATAATATGTATAGCTTTTTCTACCAAGGCAGTGAACACCAGCTATACTAGGCAATAGCTATGTATTAGAC AATGTGAGGACATAAACAGAAAGTTATTCATCTAATACAAATAGCATTCTTGCTTAACAAACAAATCAAGCCTAATTAAA ACAAGATATTAAACTGCCACATTCCTTTTTCCTGATTTGTATTGCATGGTTTCTCTTTTCATGCAGGTTCAACATTGTTG GCCAGGTACTGTTGATAATTCATATTCTAGAATTTCAACATCATACACTTTTCACTGGGAGATCAAACTTGTGTAGGATG TAGATTTCTAATGATCCATATGATGCTATAAAAAAAACTTATTCCCTTTCTTGTGCAGTGGGCAGGGACTACAAGTGTAG ATTTTTCACTTGCACAACTAATTCAGGTTATCATTCTTCTCAGCACTGGTGGGAAAAATGGTGGTGGATACATGGCTTCT AAATATGTAGTTATTGCTATCCATGGTGGGATTTTGATCCTGCATGGTATAATAAACAGTCTTCCTATTTCTGTGATATC ATTCTTAGGACAGTTGGGTGCTATCTGGAATGCTTTAGGTATGAAGAACTGAAATTCCCTATTTCATTTATAACCTGTTT GGATGAGGATAAAAGAGCATTTACTGAGTTACTGGAGCTTATCTAATGCTTTTTCCAGTAGATAAGCTTCAATTAAGTGT TCTTTTATCCATATCCAAACTGACAGTATGGGGAAAAGCCTTTTGTTTTAACATCTAATTTTTAGGTGTTTTTGTACTTA TGATTCTGATTCCATCTGTTGCAACTGAAAGGGCCAGTGCCAAGTTTGTTTTTACTCATTTCAATGCTGCTAATGGGGAT GGAATCCACAGCAGACCCTATATCTTTCTCTTGGGACTTCTAATGAGTCAGTATACACTTGCTGGGTATGATGCATCAGC TCATATGGTAAATCCTTTCTTCATTTTTTTCTCTTTCCTCAGAACTTGTTGGCTTGTGGAAATTTCATTTCCAGATAAGC TATAATATTATTTATAAGAAAATAGTAAAGATGTATTGTCAGAAGAGCTAAAATCAGTTTCATGTTAACTCAAGCTTGGT CCTTTTTCTTTGGCCTCAACGTGATTTTTTCATCCTCAAGGACTTCTAAGAATTTCACTCGAACATGTTTTAATGATGAA AATCCACATACAAGAATATTAGAAGTGCTTATGTGCATGAGCAATGTGAAACCAAATATGTACTTAATCTTTTGATAAGA TCTGGATGTATTAAAAACGAAACTGTCACTTTTATTGGTTGAAACTTGCATTTTCAGACAGAGGAAACCAAGGGTGCTGA TAGAAATGGAGCAAAAGGAATTATCAGCTCTGTTGGGATATCTATTATTGTTGGATGGGGTTATATACTAGGCATTACCT TTGCAGTCACTGACATCCCTTACCTTTTGAGTGAAAATAATGATGCTGGTGGGTATGCTATTGCTCAAATGTTTTATCTG GCATTCCAGAGAAGATATGGTAATGGAATTGGGGGTATTATTTGTTTGGCAATAGTTGCTGTTGCCATATTTTTCTGTGG CATGGGTTTAGTTACCAGCAATTCAAGGTAGCTATACTTTCTCGTAAGGTCTTTTTCCATAAAAGAGGGATTTGTTGCAT GTTTGGATACACATTAGAAAATCACGGTGAGTCAAAACTCAAAATTACAATGGACATAAGCAACTTCCCTTACTTTTGTA GCTGCCTATCGTGATTGTCTTCACCGTGGTTTTACACCGTGTATCTAAACATGCATTTAATATCTTATTTTGTTTCCAAT ATTTATAGTTACTTATGATGCTTAAAATTTGCACAGGATGGCTTATGCTTTCTCAAGAGATGGGGCCATGCCTCTATCAT CATTATGGCATAAAGTTAACAAGCAAGAGGTCCCCGTATATGCAGTTTGGCTTTCCGTTTTCATATCATTTTGCATGGCA CTAACGGTAAGCATTCTATTGTAAGATTTCATTTTAGCCATAGTTCTTAGCATTCTCTAACTCAATTCAAACTGTGTTGC AGTCTCTTGTAAGCATGGTGGCATTTCAAGCTATGGTCTCCATATCAGTGATTGTCCTCTACATTGCTTATGGCCTTCCT ATATTCTTCAGGGTGACCTTGGCACAAAAGCGATTTGTCCCAGGACCTTTCAACTTGGGTAGTTATGGGGTCATTGTTGG GTGGATTGCGGTTCTTTGGGTGGTGACCATCTCCATCCTCTTCTCATTGCCTGTTTCTTACCCAGTAACCATTGAGACGC TTAACTACACCCCAATTGCCCTTGGATGTTTGCTCATTCTTGTGATTTCTCACTGGATCATGAGTGGTCGCCATTGGTTT AAAGGCCCTATAACCAATGTAAAGAACTGAAGTTGTGTACACATATATTAGTAAACTTAGTCTATATTCGCCTACTAAGT GATGGATATTTCTCTTGTATACAAACAGGCATTGAAAGGAGAAGAAATGTAATTTTATTTCTTAGGGGATTTAATTTAGG GGAGAGCAGTCTATCTAATAATAAATTCAAGTAGTTTTCCGAAGCATAAAAAAATAATAACAAATTCAAGGTATGCCACA AAATTGAGCAACAGGTTACAGTGACACAATGCAAAGTTTAATTCTTTACTCATGACATTCAATGTTCAATAGGAAACTAC TCTAATTATAACTGACTTTGCAGTATATGGCTGAAATTATGCCTCGTCCGCGGGTATATATGAAAGTATTAAAGATTTGA TTTAGTTGTGACAAAATGCTTGAGACAGATTACATACATCATTTATATATCTATGCTACCTTAACCTTTCTCTTAAAAGC CCACCTTTCATCTTCATTTTCCTCAACCATAGAATCATTTTTCCATGACACTCGTTTCCCTCCTTTACAAACCCCATTCA TCATATTCATTCCCAATCCAATCTGCTTCTCTTCCCCCCTTCCGAGTTTAAACTTGACTCTGTCTCTTCCTCTTCCCTTT GCTAACTCCATCCTGGTGCCTTTCTCTTCTTTTTCAGTGATGCCATTGGCCTGCAATACACAAATGTTTTCCTCCACAGT ACCACTGCAATCTTCCGCAGCAAGTGAATGCTCCCACAATTTCTCACCGCATTTCCTCTCCTTAACCAAAACCTGATCAC GACTATTATATAGGTTTTCCTTAGGAAAATCTGGGAGCCAACTTGGTATGTGCAAATATTGTATTTTTGCTTTCTTGAAG CGACAAATTGATGTGCCAGAATCAATGGTTAGCTTTGGATTTTGGCTTCCAGAAGTGTTTTTCAATGGAATTGGTTTGGT AGAGGGTGCTGCCTTAGAGAGGTTGACAGAATTCATAATCTCTTTTAGAGCTTTGGAACCCAGCAGATTACTTTTGTGCA TTGCTGAACCACCAGGAAATCCTTTAACTGAGCACAGATCATGAATGCCATTGATGAGGTCAAAGAGGTTGGAGTCGGTA CGATTGGAAGCATTAGCAAAGGAGGCAGCTGATCTCGCAATGGCTTGGATATATCTCACAGAAACATCAGTCAAGGTTTC AAGAGCATCATATTCAGAGCGTTTGTAGCCAACTGACTGGCAGATCTGCGCAACTGCAATTTTGGCTTTAGCAAATGAGA ATTCTGATGGGGTATCTGCAACTTGATCATTAGGTTCTCCTAGAAATCTCTTCCTTTTGCCTTTACCCCTTCGGGTCACT TTTGATTTGGATTTTGCGGTACTGCTGTTTTGCATAGGGCTCATGGTAGAATAGTTAAAAAGAGAAAGGTAAGAGGAAGG AGGATAGAACTCAGAACCCTATGCAAAACCCTAGAGTCAAGAATTGTCCCAAATATGTAAGAGATGATGCATACCAGCTC TTTTCCTGAAATTAGAGATCAAGAAGAAATGCTATTAAAACTTGATCAACTTTACATAATCATTGTATACGAACAGAACA CTGAAGCAGGATATATATTTAAAAGAAACAGTAAATAAAACAAATAATCAAGGACATTGATTACATACCAACATTGTATA AAAGTGAAGAAGAAAACTAATAGAGAGAAAGGGCATTGATTACATACCAACATTCAATAAAAGTGAAGAAGAAAAATAAT AGAAAAAAGGAACAAAGCAATATATCAGATACAGAAAATCATACTGTGACCAGGCTTGTCATTCCCGGATAGCGGAGCGT AGCAGCGGACCCAAAAAACGCAATAGCAGTATAGCGCATAACGGGATGGCCACTACACTAAAGAAGGAGGAGGAGGAAGG AGGGAGAAAAATGAAGGAGGATGGAGGATGCTGGAGAAGTCACCGGAGGGTGGTCCAAGTGGCTGAGGTGCAGGAATAAG GGTCTGAGGGAGAAGAAAGGTGTAATGCGGCTATGTGTTTTGTTTTTCGGGGGCCTCTCTAGCTCATAATAATTGAAATA CCAAAAATACCCCAACTAATAGAACTGAAAAACCAATAACACCCCAACTAATAGAACTGAAAAATAGAAAACGTCCTCAA CTAATAGCCCCAACGCTCTAATTCGGAGGGCATTTTTACTTTCTGAACCTTCTTCTCTCTCGAAAAAACCTAATCCCTAT AGCAGTAAAACAGCTCTGCGACGGCTGTGATTTTGGCCACTAAAGCGGCCAAGATTGCTATCCGCGCCACTAAAGGCACC GCCGTCACAGGAGACCTCCACCCCGCAGCGCCGCTTTCGCGCGCTATTGACAAGCCTGACTGACAAAAATGGAAATAAAA ATTTCAAACTTATAAAGTGATCAAACAGAACATAAGTAGAATAACAAGATAGATTCCTTTATACAAGCCTACATAGTAGA TTGATTAAGAAACTAAATTCTTTTTCATTAATGGAGGAAACTCTTGATTTAATTCTAATTTCCAATCGAAGTTGGCTTGT TAGCCTATTTCATATTAGGCCCTTTAAATAGGCCAACAGGCTAATGGCTTATGGTCTTAGTAAAATTTATTTCATTTCTA TATTTCACGACATTTCTGCAGAAACTGCTGAGAAATTAAG
CDS sequence (LotjaGi5g1v0335100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGACTCTGCTAAAGAAAACATGACACTCCCATCTCATGTGCTTGCAAATGGTGATACTTCACTTGATTCTGGGCATGC CCGTCTTGTTGAACTTGGTTACAAACAAGAGCTCAAGCGTGATCTTTCGGTCATTGCAAATTTCTCCCTTTCATTCTCTA TTTTATCAGTGCTTACTGGAGTAACCACCCTTTACAACACCGGGTTGAACTATGGTGGAACTGTTTCTTTCGTGTATGGC TGGCTTCTAGCTTCTGCATTCACCATGCTTGTTGCACTGTCAATGGCTGAGATTTGCTCATCTTATCCAACATCTGGTGG TCTTTACTATTGGAGTGCCAAGCTTGCTGGCCCTGAATGGGCACCTTTTGCTTCCTGGATTACTGGCTGGTTCAACATTG TTGGCCAGTGGGCAGGGACTACAAGTGTAGATTTTTCACTTGCACAACTAATTCAGGTTATCATTCTTCTCAGCACTGGT GGGAAAAATGGTGGTGGATACATGGCTTCTAAATATGTAGTTATTGCTATCCATGGTGGGATTTTGATCCTGCATGGTAT AATAAACAGTCTTCCTATTTCTGTGATATCATTCTTAGGACAGTTGGGTGCTATCTGGAATGCTTTAGGTGTTTTTGTAC TTATGATTCTGATTCCATCTGTTGCAACTGAAAGGGCCAGTGCCAAGTTTGTTTTTACTCATTTCAATGCTGCTAATGGG GATGGAATCCACAGCAGACCCTATATCTTTCTCTTGGGACTTCTAATGAGTCAGTATACACTTGCTGGGTATGATGCATC AGCTCATATGACAGAGGAAACCAAGGGTGCTGATAGAAATGGAGCAAAAGGAATTATCAGCTCTGTTGGGATATCTATTA TTGTTGGATGGGGTTATATACTAGGCATTACCTTTGCAGTCACTGACATCCCTTACCTTTTGAGTGAAAATAATGATGCT GGTGGGTATGCTATTGCTCAAATGTTTTATCTGGCATTCCAGAGAAGATATGGTAATGGAATTGGGGGTATTATTTGTTT GGCAATAGTTGCTGTTGCCATATTTTTCTGTGGCATGGGTTTAGTTACCAGCAATTCAAGGATGGCTTATGCTTTCTCAA GAGATGGGGCCATGCCTCTATCATCATTATGGCATAAAGTTAACAAGCAAGAGGTCCCCGTATATGCAGTTTGGCTTTCC GTTTTCATATCATTTTGCATGGCACTAACGTCTCTTGTAAGCATGGTGGCATTTCAAGCTATGGTCTCCATATCAGTGAT TGTCCTCTACATTGCTTATGGCCTTCCTATATTCTTCAGGGTGACCTTGGCACAAAAGCGATTTGTCCCAGGACCTTTCA ACTTGGGTAGTTATGGGGTCATTGTTGGGTGGATTGCGGTTCTTTGGGTGGTGACCATCTCCATCCTCTTCTCATTGCCT GTTTCTTACCCAGTAACCATTGAGACGCTTAACTACACCCCAATTGCCCTTGGATGTTTGCTCATTCTTGTGATTTCTCA CTGGATCATGAGTGGTCGCCATTGGTTTAAAGGCCCTATAACCAATGTAAAGAACTGA
Protein sequence (LotjaGi5g1v0335100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDSAKENMTLPSHVLANGDTSLDSGHARLVELGYKQELKRDLSVIANFSLSFSILSVLTGVTTLYNTGLNYGGTVSFVYG WLLASAFTMLVALSMAEICSSYPTSGGLYYWSAKLAGPEWAPFASWITGWFNIVGQWAGTTSVDFSLAQLIQVIILLSTG GKNGGGYMASKYVVIAIHGGILILHGIINSLPISVISFLGQLGAIWNALGVFVLMILIPSVATERASAKFVFTHFNAANG DGIHSRPYIFLLGLLMSQYTLAGYDASAHMTEETKGADRNGAKGIISSVGISIIVGWGYILGITFAVTDIPYLLSENNDA GGYAIAQMFYLAFQRRYGNGIGGIICLAIVAVAIFFCGMGLVTSNSRMAYAFSRDGAMPLSSLWHKVNKQEVPVYAVWLS VFISFCMALTSLVSMVAFQAMVSISVIVLYIAYGLPIFFRVTLAQKRFVPGPFNLGSYGVIVGWIAVLWVVTISILFSLP VSYPVTIETLNYTPIALGCLLILVISHWIMSGRHWFKGPITNVKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 43 | 43 | - | – | |
| PANTHER | 22 | 524 | 503 | 2.8E-276 | – | |
| PANTHER | 22 | 524 | 503 | 2.8E-276 | – | |
| TIGRFAM | 29 | 519 | 491 | 2.6E-182 | ||
| PIRSF | 30 | 519 | 490 | 3.5E-49 | – | |
| TMHMM | 42 | 64 | 23 | - | – | |
| Pfam | 43 | 498 | 456 | 1.8E-57 | ||
| Phobius | 44 | 65 | 22 | - | – | |
| Gene3D | 47 | 511 | 465 | 1.7E-25 | – | |
| Phobius | 66 | 76 | 11 | - | – | |
| TMHMM | 74 | 96 | 23 | - | – | |
| Phobius | 77 | 96 | 20 | - | – | |
| Phobius | 97 | 171 | 75 | - | – | |
| TMHMM | 108 | 130 | 23 | - | – | |
| TMHMM | 145 | 167 | 23 | - | – | |
| Phobius | 172 | 198 | 27 | - | – | |
| TMHMM | 174 | 196 | 23 | - | – | |
| Phobius | 199 | 203 | 5 | - | – | |
| TMHMM | 200 | 222 | 23 | - | – | |
| Phobius | 204 | 222 | 19 | - | – | |
| Phobius | 223 | 284 | 62 | - | – | |
| TMHMM | 285 | 307 | 23 | - | – | |
| Phobius | 285 | 307 | 23 | - | – | |
| Phobius | 308 | 339 | 32 | - | – | |
| TMHMM | 340 | 362 | 23 | - | – | |
| Phobius | 340 | 362 | 23 | - | – | |
| Phobius | 363 | 394 | 32 | - | – | |
| TMHMM | 394 | 416 | 23 | - | – | |
| Phobius | 395 | 418 | 24 | - | – | |
| Phobius | 419 | 423 | 5 | - | – | |
| TMHMM | 421 | 443 | 23 | - | – | |
| Phobius | 424 | 443 | 20 | - | – | |
| Phobius | 444 | 454 | 11 | - | – | |
| TMHMM | 455 | 477 | 23 | - | – | |
| Phobius | 455 | 479 | 25 | - | – | |
| Phobius | 480 | 490 | 11 | - | – | |
| Phobius | 491 | 510 | 20 | - | – | |
| TMHMM | 492 | 511 | 20 | - | – | |
| Phobius | 511 | 525 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Amino acid transport | The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. | ||
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0335100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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