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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0335100 |
| Transcript ID | LotjaGi5g1v0335100.2 |
| Related isoforms 3 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Amino acid permease; TAIR: AT2G01170.1 bidirectional amino acid transporter 1; Swiss-Prot: sp|Q9ZU50|BAT1_ARATH Amino-acid permease BAT1; TrEMBL-Plants: tr|A0A151U749|A0A151U749_CAJCA Putative amino-acid permease C15C4.04c; Found in the gene: LotjaGi5g1v0335100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65209078..65215117) extracted from Lotus japonicus Gifu genome v1.2.
TTGACTTTGACTTTGACTTTGACTTGATATCATTCAGTTAGGACAAAAGAAAGGAGGGAAAGAAAGATACATAATGCTAA GTTATTTTATGTTAATTTGACAAAAACCAACAACTTTTGACAATTTTGCTTGTGTTTCTTTACTGTAAGCTAGATCATGG ACTCTGCTAAAGAAAACATGACACTCCCATCTCATGTGCTTGCAAATGGTGATACTTCACTTGATTCTGGGCATGCCCGT CTTGTTGAACTTGGTTACAAACAAGAGCTCAAGCGTGATCTTTCGTTAAGTTCTCTTCTTTCTTCTTTTTAAGTTTTCTT TTTCAATTTCTGTTTGGATATATTGAAGTTGTTGCTGTTTTTGACTGGTTCCTTCATTTTACAATTGCAGGGTCATTGCA AATTTCTCCCTTTCATTCTCTATTTTATCAGTGCTTACTGGAGTAACCACCCTTTACAACACCGGGTTGAACTATGGTGG AACTGTTTCTTTCGTGTATGGCTGGCTTCTAGCTTCTGCATTCACCATGCTTGTTGCACTGTCAATGGCTGAGATTTGCT CATCTTATCCAACATCTGGTGGTCTTTACTATTGGAGTGCCAAGCTTGCTGGCCCTGAATGGGCACCTTTTGCTTCCTGG ATTACTGGCTGGTACTGTAACTCCCTGCTTTTTCTCCATTGTATTTTTCAACTAGGACTATTTCATTCCTTGTTTGTAAG TGTTAGAATTGACTCTCCACTGTCAAAACCAATTATGGAATGAAGCTACAACGTTTGCTTCTGCGGTGAATATAGTTAAT TGTAGGATTTTACAACTGGATTTCATAACATTACCCTACAAAAAACACTTTTCTAATACTCAAACATGAATCACTTTGCT TTTGATTCACTTTTATTTATCATAATCAATGTTACTAAAATCAATTCTAACAACGCTGATCCAAACAGACACTAAGAAAG AAGTACCATTATAATATGTATAGCTTTTTCTACCAAGGCAGTGAACACCAGCTATACTAGGCAATAGCTATGTATTAGAC AATGTGAGGACATAAACAGAAAGTTATTCATCTAATACAAATAGCATTCTTGCTTAACAAACAAATCAAGCCTAATTAAA ACAAGATATTAAACTGCCACATTCCTTTTTCCTGATTTGTATTGCATGGTTTCTCTTTTCATGCAGGTTCAACATTGTTG GCCAGGTACTGTTGATAATTCATATTCTAGAATTTCAACATCATACACTTTTCACTGGGAGATCAAACTTGTGTAGGATG TAGATTTCTAATGATCCATATGATGCTATAAAAAAAACTTATTCCCTTTCTTGTGCAGTGGGCAGGGACTACAAGTGTAG ATTTTTCACTTGCACAACTAATTCAGGTTATCATTCTTCTCAGCACTGGTGGGAAAAATGGTGGTGGATACATGGCTTCT AAATATGTAGTTATTGCTATCCATGGTGGGATTTTGATCCTGCATGGTATAATAAACAGTCTTCCTATTTCTGTGATATC ATTCTTAGGACAGTTGGGTGCTATCTGGAATGCTTTAGGTATGAAGAACTGAAATTCCCTATTTCATTTATAACCTGTTT GGATGAGGATAAAAGAGCATTTACTGAGTTACTGGAGCTTATCTAATGCTTTTTCCAGTAGATAAGCTTCAATTAAGTGT TCTTTTATCCATATCCAAACTGACAGTATGGGGAAAAGCCTTTTGTTTTAACATCTAATTTTTAGGTGTTTTTGTACTTA TGATTCTGATTCCATCTGTTGCAACTGAAAGGGCCAGTGCCAAGTTTGTTTTTACTCATTTCAATGCTGCTAATGGGGAT GGAATCCACAGCAGACCCTATATCTTTCTCTTGGGACTTCTAATGAGTCAGTATACACTTGCTGGGTATGATGCATCAGC TCATATGGTAAATCCTTTCTTCATTTTTTTCTCTTTCCTCAGAACTTGTTGGCTTGTGGAAATTTCATTTCCAGATAAGC TATAATATTATTTATAAGAAAATAGTAAAGATGTATTGTCAGAAGAGCTAAAATCAGTTTCATGTTAACTCAAGCTTGGT CCTTTTTCTTTGGCCTCAACGTGATTTTTTCATCCTCAAGGACTTCTAAGAATTTCACTCGAACATGTTTTAATGATGAA AATCCACATACAAGAATATTAGAAGTGCTTATGTGCATGAGCAATGTGAAACCAAATATGTACTTAATCTTTTGATAAGA TCTGGATGTATTAAAAACGAAACTGTCACTTTTATTGGTTGAAACTTGCATTTTCAGACAGAGGAAACCAAGGGTGCTGA TAGAAATGGAGCAAAAGGAATTATCAGCTCTGTTGGGATATCTATTATTGTTGGATGGGGTTATATACTAGGCATTACCT TTGCAGTCACTGACATCCCTTACCTTTTGAGTGAAAATAATGATGCTGGTGGGTATGCTATTGCTCAAATGTTTTATCTG GCATTCCAGAGAAGATATGGTAATGGAATTGGGGGTATTATTTGTTTGGCAATAGTTGCTGTTGCCATATTTTTCTGTGG CATGGGTTTAGTTACCAGCAATTCAAGGTAGCTATACTTTCTCGTAAGGTCTTTTTCCATAAAAGAGGGATTTGTTGCAT GTTTGGATACACATTAGAAAATCACGGTGAGTCAAAACTCAAAATTACAATGGACATAAGCAACTTCCCTTACTTTTGTA GCTGCCTATCGTGATTGTCTTCACCGTGGTTTTACACCGTGTATCTAAACATGCATTTAATATCTTATTTTGTTTCCAAT ATTTATAGTTACTTATGATGCTTAAAATTTGCACAGGATGGCTTATGCTTTCTCAAGAGATGGGGCCATGCCTCTATCAT CATTATGGCATAAAGTTAACAAGCAAGAGGTCCCCGTATATGCAGTTTGGCTTTCCGTTTTCATATCATTTTGCATGGCA CTAACGGTAAGCATTCTATTGTAAGATTTCATTTTAGCCATAGTTCTTAGCATTCTCTAACTCAATTCAAACTGTGTTGC AGTCTCTTGTAAGCATGGTGGCATTTCAAGCTATGGTCTCCATATCAGTGATTGTCCTCTACATTGCTTATGGCCTTCCT ATATTCTTCAGGGTGACCTTGGCACAAAAGCGATTTGTCCCAGGACCTTTCAACTTGGGTAGTTATGGGGTCATTGTTGG GTGGATTGCGGTTCTTTGGGTGGTGACCATCTCCATCCTCTTCTCATTGCCTGTTTCTTACCCAGTAACCATTGAGACGC TTAACTACACCCCAATTGCCCTTGGATGTTTGCTCATTCTTGTGATTTCTCACTGGATCATGAGTGGTCGCCATTGGTTT AAAGGCCCTATAACCAATGTAAAGAACTGAAGTTGTGTACACATATATTAGTAAACTTAGTCTATATTCGCCTACTAAGT GATGGATATTTCTCTTGTATACAAACAGGCATTGAAAGGAGAAGAAATGTAATTTTATTTCTTAGGGGATTTAATTTAGG GGAGAGCAGTCTATCTAATAATAAATTCAAGTAGTTTTCCGAAGCATAAAAAAATAATAACAAATTCAAGGTATGCCACA AAATTGAGCAACAGGTTACAGTGACACAATGCAAAGTTTAATTCTTTACTCATGACATTCAATGTTCAATAGGAAACTAC TCTAATTATAACTGACTTTGCAGTATATGGCTGAAATTATGCCTCGTCCGCGGGTATATATGAAAGTATTAAAGATTTGA TTTAGTTGTGACAAAATGCTTGAGACAGATTACATACATCATTTATATATCTATGCTACCTTAACCTTTCTCTTAAAAGC CCACCTTTCATCTTCATTTTCCTCAACCATAGAATCATTTTTCCATGACACTCGTTTCCCTCCTTTACAAACCCCATTCA TCATATTCATTCCCAATCCAATCTGCTTCTCTTCCCCCCTTCCGAGTTTAAACTTGACTCTGTCTCTTCCTCTTCCCTTT GCTAACTCCATCCTGGTGCCTTTCTCTTCTTTTTCAGTGATGCCATTGGCCTGCAATACACAAATGTTTTCCTCCACAGT ACCACTGCAATCTTCCGCAGCAAGTGAATGCTCCCACAATTTCTCACCGCATTTCCTCTCCTTAACCAAAACCTGATCAC GACTATTATATAGGTTTTCCTTAGGAAAATCTGGGAGCCAACTTGGTATGTGCAAATATTGTATTTTTGCTTTCTTGAAG CGACAAATTGATGTGCCAGAATCAATGGTTAGCTTTGGATTTTGGCTTCCAGAAGTGTTTTTCAATGGAATTGGTTTGGT AGAGGGTGCTGCCTTAGAGAGGTTGACAGAATTCATAATCTCTTTTAGAGCTTTGGAACCCAGCAGATTACTTTTGTGCA TTGCTGAACCACCAGGAAATCCTTTAACTGAGCACAGATCATGAATGCCATTGATGAGGTCAAAGAGGTTGGAGTCGGTA CGATTGGAAGCATTAGCAAAGGAGGCAGCTGATCTCGCAATGGCTTGGATATATCTCACAGAAACATCAGTCAAGGTTTC AAGAGCATCATATTCAGAGCGTTTGTAGCCAACTGACTGGCAGATCTGCGCAACTGCAATTTTGGCTTTAGCAAATGAGA ATTCTGATGGGGTATCTGCAACTTGATCATTAGGTTCTCCTAGAAATCTCTTCCTTTTGCCTTTACCCCTTCGGGTCACT TTTGATTTGGATTTTGCGGTACTGCTGTTTTGCATAGGGCTCATGGTAGAATAGTTAAAAAGAGAAAGGTAAGAGGAAGG AGGATAGAACTCAGAACCCTATGCAAAACCCTAGAGTCAAGAATTGTCCCAAATATGTAAGAGATGATGCATACCAGCTC TTTTCCTGAAATTAGAGATCAAGAAGAAATGCTATTAAAACTTGATCAACTTTACATAATCATTGTATACGAACAGAACA CTGAAGCAGGATATATATTTAAAAGAAACAGTAAATAAAACAAATAATCAAGGACATTGATTACATACCAACATTGTATA AAAGTGAAGAAGAAAACTAATAGAGAGAAAGGGCATTGATTACATACCAACATTCAATAAAAGTGAAGAAGAAAAATAAT AGAAAAAAGGAACAAAGCAATATATCAGATACAGAAAATCATACTGTGACCAGGCTTGTCATTCCCGGATAGCGGAGCGT AGCAGCGGACCCAAAAAACGCAATAGCAGTATAGCGCATAACGGGATGGCCACTACACTAAAGAAGGAGGAGGAGGAAGG AGGGAGAAAAATGAAGGAGGATGGAGGATGCTGGAGAAGTCACCGGAGGGTGGTCCAAGTGGCTGAGGTGCAGGAATAAG GGTCTGAGGGAGAAGAAAGGTGTAATGCGGCTATGTGTTTTGTTTTTCGGGGGCCTCTCTAGCTCATAATAATTGAAATA CCAAAAATACCCCAACTAATAGAACTGAAAAACCAATAACACCCCAACTAATAGAACTGAAAAATAGAAAACGTCCTCAA CTAATAGCCCCAACGCTCTAATTCGGAGGGCATTTTTACTTTCTGAACCTTCTTCTCTCTCGAAAAAACCTAATCCCTAT AGCAGTAAAACAGCTCTGCGACGGCTGTGATTTTGGCCACTAAAGCGGCCAAGATTGCTATCCGCGCCACTAAAGGCACC GCCGTCACAGGAGACCTCCACCCCGCAGCGCCGCTTTCGCGCGCTATTGACAAGCCTGACTGACAAAAATGGAAATAAAA ATTTCAAACTTATAAAGTGATCAAACAGAACATAAGTAGAATAACAAGATAGATTCCTTTATACAAGCCTACATAGTAGA TTGATTAAGAAACTAAATTCTTTTTCATTAATGGAGGAAACTCTTGATTTAATTCTAATTTCCAATCGAAGTTGGCTTGT TAGCCTATTTCATATTAGGCCCTTTAAATAGGCCAACAGGCTAATGGCTTATGGTCTTAGTAAAATTTATTTCATTTCTA TATTTCACGACATTTCTGCAGAAACTGCTGAGAAATTAAG
CDS sequence (LotjaGi5g1v0335100.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGTCAGTATACACTTGCTGGGTATGATGCATCAGCTCATATGACAGAGGAAACCAAGGGTGCTGATAGAAATGGAGC AAAAGGAATTATCAGCTCTGTTGGGATATCTATTATTGTTGGATGGGGTTATATACTAGGCATTACCTTTGCAGTCACTG ACATCCCTTACCTTTTGAGTGAAAATAATGATGCTGGTGGGTATGCTATTGCTCAAATGTTTTATCTGGCATTCCAGAGA AGATATGGTAATGGAATTGGGGGTATTATTTGTTTGGCAATAGTTGCTGTTGCCATATTTTTCTGTGGCATGGGTTTAGT TACCAGCAATTCAAGGATGGCTTATGCTTTCTCAAGAGATGGGGCCATGCCTCTATCATCATTATGGCATAAAGTTAACA AGCAAGAGGTCCCCGTATATGCAGTTTGGCTTTCCGTTTTCATATCATTTTGCATGGCACTAACGTCTCTTGTAAGCATG GTGGCATTTCAAGCTATGGTCTCCATATCAGTGATTGTCCTCTACATTGCTTATGGCCTTCCTATATTCTTCAGGGTGAC CTTGGCACAAAAGCGATTTGTCCCAGGACCTTTCAACTTGGGTAGTTATGGGGTCATTGTTGGGTGGATTGCGGTTCTTT GGGTGGTGACCATCTCCATCCTCTTCTCATTGCCTGTTTCTTACCCAGTAACCATTGAGACGCTTAACTACACCCCAATT GCCCTTGGATGTTTGCTCATTCTTGTGATTTCTCACTGGATCATGAGTGGTCGCCATTGGTTTAAAGGCCCTATAACCAA TGTAAAGAACTGA
Protein sequence (LotjaGi5g1v0335100.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSQYTLAGYDASAHMTEETKGADRNGAKGIISSVGISIIVGWGYILGITFAVTDIPYLLSENNDAGGYAIAQMFYLAFQR RYGNGIGGIICLAIVAVAIFFCGMGLVTSNSRMAYAFSRDGAMPLSSLWHKVNKQEVPVYAVWLSVFISFCMALTSLVSM VAFQAMVSISVIVLYIAYGLPIFFRVTLAQKRFVPGPFNLGSYGVIVGWIAVLWVVTISILFSLPVSYPVTIETLNYTPI ALGCLLILVISHWIMSGRHWFKGPITNVKN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 29 | 29 | - | – | |
| PANTHER | 1 | 269 | 269 | 1.0E-156 | – | |
| PANTHER | 1 | 269 | 269 | 1.0E-156 | – | |
| Pfam | 2 | 243 | 242 | 9.4E-36 | ||
| Gene3D | 2 | 260 | 259 | 2.7E-16 | – | |
| Phobius | 30 | 52 | 23 | - | – | |
| TMHMM | 30 | 52 | 23 | - | – | |
| Phobius | 53 | 84 | 32 | - | – | |
| TMHMM | 85 | 107 | 23 | - | – | |
| Phobius | 85 | 107 | 23 | - | – | |
| Phobius | 108 | 139 | 32 | - | – | |
| TMHMM | 139 | 161 | 23 | - | – | |
| Phobius | 140 | 163 | 24 | - | – | |
| Phobius | 164 | 168 | 5 | - | – | |
| TMHMM | 166 | 188 | 23 | - | – | |
| Phobius | 169 | 188 | 20 | - | – | |
| Phobius | 189 | 199 | 11 | - | – | |
| TMHMM | 200 | 222 | 23 | - | – | |
| Phobius | 200 | 224 | 25 | - | – | |
| Phobius | 225 | 235 | 11 | - | – | |
| Phobius | 236 | 255 | 20 | - | – | |
| TMHMM | 237 | 256 | 20 | - | – | |
| Phobius | 256 | 270 | 15 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Membrane | A lipid bilayer along with all the proteins and protein complexes embedded in it an attached to it. | ||
| Molecular function | Transmembrane transporter activity | Enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other. | ||
| Biological process | Transmembrane transport | The process in which a solute is transported across a lipid bilayer, from one side of a membrane to the other. |
Expression pattern of LotjaGi5g1v0335100.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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