Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0335700 |
| Transcript ID | LotjaGi5g1v0335700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Serpin-like protein; TAIR: AT1G47710.1 Serine protease inhibitor (SERPIN) family protein; Swiss-Prot: sp|Q9S7T8|SPZX_ARATH Serpin-ZX; TrEMBL-Plants: tr|I3S0S8|I3S0S8_LOTJA Uncharacterized protein; Found in the gene: LotjaGi5g1v0335700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65281759..65285802) extracted from Lotus japonicus Gifu genome v1.2.
ATAATCTGTTTTAGTTGATTGGTAGACCATAGAGAGAGAGAGAGAGTGTGAAGACTCTTTAGTCTTTATTATCCATACAC ACGCGACTCAACCATCTGAAATTAGGATTAGGGTTTGTGTTGGTATCCTCCTCTCTGATTCGAATCGAAGCAAAATCAAT CAGAATTCAGATCAACAACAATGGCGATGGATCTCCAAAAATCAAAATCAAATTCAATCGACGCTGTTTTGAGCTTCACA AAACATGTATTATCTAAAGAAGAATATCAGGAGAAGAACCTTGTCTTCTCGCCCTTGTCTCTGTACGCTGCTCTTAGCGT CATGGCCGCCGGTGCAGATGGCCTCACACTCGACGAGCTTCTTTCATTCCTCCGATTTGACTCCGTCGACCATCTCACCA CCTTCTTCTCTCAGGTCCTCTCCCCTGTGTTGTTCTCCGACGACCATCTCTCTTTTGCTAATGGAATGTGGGTTGATCAA TCACTTTCCATTTTCCATTCTTTTAAACAACTTGTCTCCACTCATTACAAGGCCACTCTAGCCTCACTTGATTTTCAGAC TAAGGGTGATGAAGTGCTCCCTGAAGTGGATTCATGGGTTGAAAAAGAGACTAATGGCCATATTACAGACCTTGTTCCTC CCGAAGCAGTAACCAACTCAACTAGGTTTATCTTTGCAAATGCACTGCGCTTCAATGGTATGTGGAAACAAAGGTTTAAT GGTGTAACAGTACGAGATGAGTTTTACCTCCTTAATGACACCATTGTCGATGCTTATTTCATGACAAGCAAAAAGAAGAA GAAGATGCAGGGAGTTGGGTTTGGCACCCCACCTATGGGGCTTGGCACCCCACTTTATCAAATACGGAATTTAAAATTCC GTATTCTCCCTATTGAATACGGAACTTAAAATTCCGTACTGTATTTAAGCATGCGTGTCACATTTTCAACCACTCATTAT ATACTAAAACAGATACGGAATTTTATTTTCCGTATTGATACGGAACTTTAAATTCCGTATTTAATAAAGTGGGGTGCAAA GCCTAAGGGGTGGGGCACCAAACTCAATATTAGAGTTTTTGATGGTTTCAAAATCCTCCGTCTTCCTTATAAACGAGCTA GTGATACAAAACGCCGCTTCTCTATGTGCTTTTTTCTTCCAGATGAAACAGATAAGTTGTCTTCAAAATCTGGTTTCTTC AAAGGCAAACTTCCTCGCAAAAAAAAGCCAGTACGATGCCTCAGAATTCCAAAATTCAGTATTTCTTCTACTTTTCAAGC TTCAGATATGCTCAAGAAGGTTGGAGTGCTTTCACCTTTCTCTCCTCAGGATGCCGATTTTACAAAAATGGTGGAGGTGA ATTCTACTTCTGATAAATTATACGTGGAAAACATATTTCATAAAGTTTCTATTCAAGTGACTGAACAAGGCACTGAGGCA ACAGCAGCTACGGTGGGGATTGGACGGGCACCAACAGGTGGTTTTGAGCCACCACCTTCTCGACGTATAGACTTTGTAGC TGACCACCCTTTCCTCTTCTTGATCCGAGAAGATTTCACCGGAACAATCCTTTTCATTGGGCAGGTTCTCAATCCCCGTC ATTGAGCTCCGGTCAAGGTTAGCAATCTTAATATCTTTTGCATTTTGTGATTTGTACTGTTGGTGATTTTCTTTATTTTT CTGTAATGGAATAGTTTAAAACTGTCAAAGGACTAATTATAATTGTTCATGTTCTGTTTTGCTCATTACTACATTTTTTT CCGTTGTGGTAGTGTTACTGATGGCACAAATAGATGTTTCTCAATTTTCATTAAATTGAAAAATGGAATAGTTTGAAATG GTGGAAGGACTAATTATAGTCGTTCTGTAGAGTTTTAGTTTGTTCTTTTAAACCTATTTGATTGAACCAATCTTTCTTAG TGGGCTTTGTAGTGTTTTGCTCATTACTATACTTTCTTTTTAAAAAGAATTGTTAGTGTTATAATTGACATAAATAGAAT TTTCTCAATTGGCATTAATTATGAGATTTGTAACAATAAATTTTCTTGACCATTTTTTGCATGATGCTTTGTAATTTAAG TAATTGAACTAGTGTAGTGACCCCCCACCCCCCCCAAAAAAAATGGGGAAGAGACAGGCAAGGCACTATTCAAAGTTGCC TTTGAAACAAAGACGCTTGAATTTTTGCTCTTTCGTGACTGATATGAAAAAGCAGCTCTATAAGCGGGAAGGGTTCACTT AAAACAACTGATTCTTGGTTTTCTATCATCATATAATTTTAAATTTTTTAATTGCATCATTCTATTTGAAATCTCATCCT TTTTTGGTCATTTTTTGTGTTGGACCTATTTGTACACTGAAAATCTAAGATGGAAAAATTAGGATTTTTCTGATTTGATG AACATTCTTATTTTCTATTTCTTGTCTTACTCTTAATTACATAAGCCTAATATGATTTAGGAAAATTTTATGAAGATGTT TGTGGTAAGTTTATCAGCAACTTTTCCTCTCCTCTCTACTTTCTGGGCATGATATGAACTTGATTTCACTAGTTCTGTTA CACGGTTTATTAACGGAAAGGGTTGTTTAATCTTGTCGGAGTATTTGGGATAATCCCCGAATAAAACTCTCTATGACAGT CTACGGTCTTCTACTTGCTGCTGCTCTCTATTAGAGATTGTTCGTGCTTGCGTCATTCATTGTATTCTCATCTCTACTAA AGAACTGCTAGTGCTAGTGCATATGTTAATTTACAATTTAGTGGTTTCTGCTCTTGCGTATACATCATCCATAAGCCCAA AAAAATTTGTATGGATCCAGGAACTGCTTTCTTCATTGAAACCCTTTGCTATCGTTAAATTGCATGTCTCTATCTCCTTA TGCAGTGAAGGTAACACGAGCTTTGGCATATGCAGTTAAGGATGCCGTGCTACTTGACGTTGAGAGGACGATGCATGACA GTGCAGCAGCGGAAGGGGGAACATGGGTTCTGGGTTCAATTTTTATGGGTTATGGGTCAGAAATCGGAGGTACATGGGTT GTGGGTTCAATTTGTACTGGTTATGGGTTCAATTCCTTATGGAACAGAGAATCTGAAGATAAAAAGCTGGGTTTTAGGAA GGAGATCTAGGTTGGGAGGGGAGGACATGGTAGAGTTGAGATTTTTTTTTGATAGGCAGGTAGAGTTGAGATTACCAGGT AAAACCATCGTCTTCTGTGATAAACTGTCGTCCATGAAGATGTTGTAGGAGGTGGAGGCCCACTAAAGGTTCTTCTAGAA GCAGCCCGCGAAGATCTTGTTCCCCGGCATCGATTGCAACTCCATGAGTAACCTGATCTGCAATTACTTTTATATTGGGT TGAAGTACCTCTTGTACTTGCAGTATCTCTAATTCAGTATTAATTGACTTATAAAAAAAAACTGATTGTTAGGTATCATT TTTCAGTTGTAACTCAATATATCTATCCTTTCCTTTCTGAAGTGATGTCCTCAATCCTTTTTAGTATTGAACCTATTGGT AACATAAGCCTAAGTAGGATGTAGGAAAAATTTATGAGGATGTTTGTGGTAAGTATGATGTTGATTTTTGCATCTCAATT AAACCCTGAATGCCACTCATGGAAGGTTTTACTGCATTTTGTATATCTGTATTTGTTACGTTACTGAACCTGTTTTTCTT CCTTTTGTGATCGGGGCATGGCTTCTAATTTGTGGCTTCTCACTAAAAGAGACCAAGTAAAGATGATTCACATGATGATG ATGAAGTTAATTTTGTTTTCAAATAAAGCCTGGAGGCCAAAATCAATATTAGTGGGTTTAATAAAACCTGTGATAGAACA AATACTGCTTATTGAAAATAAATTTCTCTTCCCATCTATTGCTTTGGGCTCCTCTGTCTCCTCAACATGACAACACCTAT ATGCATGATACTCACAACGCCATAAACTCCTTCCTTCTTTTTTTTTTTTGGTCCAAGATAAACTCCTTCCTTCTTGAGAG GTTTATTTAGTTTTTATCTGTACAATTGGGCTTTAATGAATTTG
CDS sequence (LotjaGi5g1v0335700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGATGGATCTCCAAAAATCAAAATCAAATTCAATCGACGCTGTTTTGAGCTTCACAAAACATGTATTATCTAAAGA AGAATATCAGGAGAAGAACCTTGTCTTCTCGCCCTTGTCTCTGTACGCTGCTCTTAGCGTCATGGCCGCCGGTGCAGATG GCCTCACACTCGACGAGCTTCTTTCATTCCTCCGATTTGACTCCGTCGACCATCTCACCACCTTCTTCTCTCAGGTCCTC TCCCCTGTGTTGTTCTCCGACGACCATCTCTCTTTTGCTAATGGAATGTGGGTTGATCAATCACTTTCCATTTTCCATTC TTTTAAACAACTTGTCTCCACTCATTACAAGGCCACTCTAGCCTCACTTGATTTTCAGACTAAGGGTGATGAAGTGCTCC CTGAAGTGGATTCATGGGTTGAAAAAGAGACTAATGGCCATATTACAGACCTTGTTCCTCCCGAAGCAGTAACCAACTCA ACTAGGTTTATCTTTGCAAATGCACTGCGCTTCAATGATGAAACAGATAAGTTGTCTTCAAAATCTGGTTTCTTCAAAGG CAAACTTCCTCGCAAAAAAAAGCCAGTACGATGCCTCAGAATTCCAAAATTCAGTATTTCTTCTACTTTTCAAGCTTCAG ATATGCTCAAGAAGGTTGGAGTGCTTTCACCTTTCTCTCCTCAGGATGCCGATTTTACAAAAATGGTGGAGGTGAATTCT ACTTCTGATAAATTATACGTGGAAAACATATTTCATAAAGTTTCTATTCAAGTGACTGAACAAGGCACTGAGGCAACAGC AGCTACGGTGGGGATTGGACGGGCACCAACAGGTGGTTTTGAGCCACCACCTTCTCGACGTATAGACTTTGTAGCTGACC ACCCTTTCCTCTTCTTGATCCGAGAAGATTTCACCGGAACAATCCTTTTCATTGGGCAGGTTCTCAATCCCCGTCATTGA
Protein sequence (LotjaGi5g1v0335700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAMDLQKSKSNSIDAVLSFTKHVLSKEEYQEKNLVFSPLSLYAALSVMAAGADGLTLDELLSFLRFDSVDHLTTFFSQVL SPVLFSDDHLSFANGMWVDQSLSIFHSFKQLVSTHYKATLASLDFQTKGDEVLPEVDSWVEKETNGHITDLVPPEAVTNS TRFIFANALRFNDETDKLSSKSGFFKGKLPRKKKPVRCLRIPKFSISSTFQASDMLKKVGVLSPFSPQDADFTKMVEVNS TSDKLYVENIFHKVSIQVTEQGTEATAATVGIGRAPTGGFEPPPSRRIDFVADHPFLFLIREDFTGTILFIGQVLNPRH
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Gene3D | 1 | 260 | 260 | 6.8E-62 | ||
| SMART | 17 | 317 | 301 | 3.9E-38 | ||
| PANTHER | 19 | 173 | 155 | 2.2E-78 | – | |
| PANTHER | 19 | 173 | 155 | 2.2E-78 | ||
| SUPERFAMILY | 23 | 317 | 295 | 7.33E-73 | ||
| Pfam | 25 | 172 | 148 | 1.8E-32 | ||
| PANTHER | 176 | 318 | 143 | 2.2E-78 | ||
| PANTHER | 176 | 318 | 143 | 2.2E-78 | – | |
| Pfam | 191 | 317 | 127 | 4.9E-32 | ||
| Gene3D | 283 | 319 | 37 | 3.8E-8 | – | |
| ProSitePatterns | 290 | 300 | 11 | - |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Extracellular space | That part of a multicellular organism outside the cells proper, usually taken to be outside the plasma membranes, and occupied by fluid. |
Expression pattern of LotjaGi5g1v0335700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…