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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0338300 |
| Transcript ID | LotjaGi5g1v0338300.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Bax inhibitor-1 family protein; TAIR: AT1G03070.1 Bax inhibitor-1 family protein; Swiss-Prot: sp|Q94A20|BI1L_ARATH BI1-like protein; TrEMBL-Plants: tr|V7BDE1|V7BDE1_PHAVU Uncharacterized protein; Found in the gene: LotjaGi5g1v0338300 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65539796..65541878) extracted from Lotus japonicus Gifu genome v1.2.
ATTTTCAATAGAAATGCTCATTAATAGTATAGAGTTCACGCGCAAATGCCAAAATTAAACAAAACCATTTCTATATATGC CCTGCATTCCAATATCGGCTTCGGTTTCAACAAAACAGAGTACGTTGCAGCTGAAAAAACAACAACCAACAACATCATTC AATATCATCTTCATCATCAATTGACATATCTTTCTTCATCATTTTTCTCTTCTGAATTCATTTTGTGGGGCTTCTCTGGT TAATTGACATATCACTGCCATGGGGAAGCACGGTGACATTGAGGCTGGGGCCAGCAACAATAACAATGTCTTGTATCCAT ACATGATAGAGTCACCGGAGCTACGGTGGGGATTCATCCGCAAGGTTTACACCATTGTTTCTCTTCAGCTTCTTTTCACA GCTGGGTTTGCCTCCTTCTTCATCTTCTTCCCACCGGCAAAGAATTTTGCTCTCTACAATGATTATCGCCTCTTTGTATT CTTTGGAGCTGTCATCGTCACATTCATACGTACCTAATTAAACTCCTTTTTTTCCTCTTTTTTTAATTGATTAAATCTCA TTTTGGGGTTTTAGTTAATTTAATCATGTTTTTGGACATGCAGTTTTGTTTGTGTTGAGCAAATATTACAACAAACACCC GTTGAATCTTTTTCTTCTTGGTCTCTATACTCTGGGCATGTCTGTTACCATTGGATTTGCTTGTGCCTTTGCCAAAGGTA GGAACTCTTTCTAATCTTAAGCTATATCTTCATAAAACATGTGGGGGTAATTGTCTACTTTCCAATAGCAATAATGATTT CGAGACATACGAAAAATTCCAAATATTCATGAGACATATGTGGATTTAACTGCCGCAAATGTTTCCAGAGGTTAAACCGT TGCTAATGTGTATGTTTGTTTGATTTCCATGTCTCTTAAGTATATACATTAATCTTTTCTTTTTAAATTAATATACAATG TATCTTCATTTTCTTATGTATCATTGTTTAGATATATATAATTGTGTATAATAGAAAAAATGTTCATCTAGTCGGAGATG GACCCATATTTATTTGAAATGAGGTGATTGCTCCTCGACTTTTTTAATAAAATAGTGTTTAAATGTTGTATTTGCCGTCT CAATTTTATAAAATTATATCCATATACAAATAGTAATTTTTTATTTTGTTTAGTGTGTTAAATTTTCATCCTCATTTTTC TTTTTTCCACCCTTGAGTTTGTGGTAGTTAAGCTAGATTCTTGTAATTTTTGCGGTGGATCTTCCTAAGGGGTCAGTGTT TTGGGAAAAACAGTATCTGCTACAATTTCTTGAACTAATTTAAAAGAAAAAACAATTGTGTATATTGAAAATATAACTAA CATGTGTGAGTTTTGTGTGCACATTAACATTTAACAGCAATGATTGTCCTAGAAGCTGCATTTCTAACGGGTGTGGTTGT TGCGAGCTTAACGTTGTACACATTTTGGGCTGTGAAAAGAGGCAGTGATTTTAGTTTCCTTGGCCCATTCCTCTTTGCTT CCCTTATGGTCATGTTGTTATTCGCAATGATTCAGGTAAACATTCTCCCCCTTTCATTTAATTAGTTTCCTCTTAAATTA TGTGAATGATACTAATTAATATTGTTTATGATTGAACAGATATTTTTCCCTCTTGGACCAATCGGGCGGATGGTGTTTGC TGGGATTGGAGCACTAGTGATGTGTGGTTTCATCGTATATGACACGTGTGACCTGATTAAAAGATACACCTATGACGACT ATATATGGGCTGCTATCTCCATCTATGGTGATATTGTCAATCTCTTCATGTACCTGCTTACACTTTTGAATGACCTATAA GTCATTTAGTTAGGTGATCCTCAATTTCGAACTTCTTTCTTCCATCTTCACTTTGTTTAGATGCAGAAGGGTCATTCAAG GCCAAATTGGAAAATTACCATAAATCTTTTATCAGTTACGCTATTTGTTACGAAGAAAAATCAACGAAGGTCAAGAATGA GTTGTGTTTTCTCCAAAAGAAAAAGATTTGGAATTGAACTGTTATTTACGAACATAAGTTTGACGAAACCAACGAATACA AAT
CDS sequence (LotjaGi5g1v0338300.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAGCACGGTGACATTGAGGCTGGGGCCAGCAACAATAACAATGTCTTGTATCCATACATGATAGAGTCACCGGA GCTACGGTGGGGATTCATCCGCAAGGTTTACACCATTGTTTCTCTTCAGCTTCTTTTCACAGCTGGGTTTGCCTCCTTCT TCATCTTCTTCCCACCGGCAAAGAATTTTGCTCTCTACAATGATTATCGCCTCTTTGTATTCTTTGGAGCTGTCATCGTC ACATTCATACTTTTGTTTGTGTTGAGCAAATATTACAACAAACACCCGTTGAATCTTTTTCTTCTTGGTCTCTATACTCT GGGCATGTCTGTTACCATTGGATTTGCTTGTGCCTTTGCCAAAGCAATGATTGTCCTAGAAGCTGCATTTCTAACGGGTG TGGTTGTTGCGAGCTTAACGTTGTACACATTTTGGGCTGTGAAAAGAGGCAGTGATTTTAGTTTCCTTGGCCCATTCCTC TTTGCTTCCCTTATGGTCATGTTGTTATTCGCAATGATTCAGATATTTTTCCCTCTTGGACCAATCGGGCGGATGGTGTT TGCTGGGATTGGAGCACTAGTGATGTGTGGTTTCATCGTATATGACACGTGTGACCTGATTAAAAGATACACCTATGACG ACTATATATGGGCTGCTATCTCCATCTATGGTGATATTGTCAATCTCTTCATGTACCTGCTTACACTTTTGAATGACCTA TAA
Protein sequence (LotjaGi5g1v0338300.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKHGDIEAGASNNNNVLYPYMIESPELRWGFIRKVYTIVSLQLLFTAGFASFFIFFPPAKNFALYNDYRLFVFFGAVIV TFILLFVLSKYYNKHPLNLFLLGLYTLGMSVTIGFACAFAKAMIVLEAAFLTGVVVASLTLYTFWAVKRGSDFSFLGPFL FASLMVMLLFAMIQIFFPLGPIGRMVFAGIGALVMCGFIVYDTCDLIKRYTYDDYIWAAISIYGDIVNLFMYLLTLLNDL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 35 | 35 | - | – | |
| PANTHER | 4 | 239 | 236 | 8.3E-132 | ||
| PANTHER | 4 | 239 | 236 | 8.3E-132 | – | |
| Pfam | 31 | 237 | 207 | 4.0E-44 | ||
| Phobius | 36 | 57 | 22 | - | – | |
| TMHMM | 39 | 56 | 18 | - | – | |
| Phobius | 58 | 68 | 11 | - | – | |
| Phobius | 69 | 88 | 20 | - | – | |
| TMHMM | 71 | 88 | 18 | - | – | |
| Phobius | 89 | 99 | 11 | - | – | |
| TMHMM | 97 | 119 | 23 | - | – | |
| Phobius | 100 | 122 | 23 | - | – | |
| Phobius | 123 | 127 | 5 | - | – | |
| TMHMM | 124 | 146 | 23 | - | – | |
| Phobius | 128 | 147 | 20 | - | – | |
| Phobius | 148 | 158 | 11 | - | – | |
| TMHMM | 153 | 175 | 23 | - | – | |
| Phobius | 159 | 179 | 21 | - | – | |
| TMHMM | 180 | 202 | 23 | - | – | |
| Phobius | 180 | 184 | 5 | - | – | |
| Phobius | 185 | 203 | 19 | - | – | |
| Phobius | 204 | 214 | 11 | - | – | |
| Phobius | 215 | 234 | 20 | - | – | |
| TMHMM | 215 | 237 | 23 | - | – | |
| Phobius | 235 | 240 | 6 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0338300.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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