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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0340500 |
| Transcript ID | LotjaGi5g1v0340500.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Alpha-glucosidase; TAIR: AT1G68560.1 alpha-xylosidase 1; Swiss-Prot: sp|Q9S7Y7|XYL1_ARATH Alpha-xylosidase 1; TrEMBL-Plants: tr|A0A072W1R5|A0A072W1R5_MEDTR Alpha-glucosidase; Found in the gene: LotjaGi5g1v0340500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:65788819..65793182) extracted from Lotus japonicus Gifu genome v1.2.
AAACAAAGCAAAAATGAGTGATTCAAAGTGGAGGATCCACACGACACATGTCACATGAGAAAGTAGAAGGACAGTGGGAC CCAATGGCACACTGTCAGAGTCTTGCTTGATCCACCAAAGTCACGCGTAACGCAATGGATGATCCTATGACTCACTCCAT CACCCTTTCAAGGAGGACAAACAACACAACAAAACAAAACTGTGGTTATTTATACATGTCATGAATCACAAGTAGCTCAA GGTGCCTTACACTAGAGAGTGAGCTATTATGGGTTCTCCTAATCCTTTAGCTTCTCTTTGTTTCTTTTCACTTCTTCTAA CTTGCTTTCTGTGTGTGGCTGAAGAAGCTAACTCTTCTTCTCCCAAGGCAAACAAAATTGGCCAAGGCTACCGTTTGATA TCTATTGAAGATGCCCCTGATGGTTCCATCATGGGGATTCTCCAAGTTAAGGAGAAGAACAATATCTATGGTCCTGACAT TCCCCTTTTACGATTCTATGTCAAGTATGTCATTCTCTGCAATTTAGCATTTTCTCTTATGAAAACGTCAAACATGGGAC ACAACCTTCTAGTTACATTTATCACCATAATTAGATCAATTATAACATTTTGTTATATCCATAGTCTCTTCTTATTCTAA CAACTTTGATATTTGGATAGACATTTTAATTTATACTAATTTTAAGTCATGTCATGGCTCCACCCTGTCCATATAATATC TTATTTGTGTTCCATGTCATATCCATGTTTTCTAGTACTGAATCTGTTTCACTGTTCTTGATTTTGCAGGCACGAAACTG ATAATCGTTTGCGGGTATACATCAGTGATGCAAAGAGTCAAAGGTGGGAGGTTCCTTATGATCTTTTGCCAAGGGAGAAA CCACCTGCTTTGAAGCAGAACATTAAGAGGTTGAGGAAGAATCAAATATCAGTGTCAGAGTACTCTGGCTCTGAGCTTGT CTTCAGTTACACTACAGACCCGTTTAGCTTTGCAGTGAAAAGGAAGTCCAATGGAGATACCCTTTTTAATTCCAGCTCTG ATGAATCAGACCCATTTGGCCCATTGGTTTTCAAGGACCAGTACCTGGAAATTTCTACCAAGTTGCCCAAAGAAGCCTCC TTGTATGGTTTGGGGGAAAACACACAACCAAATGGGATCAAACTGAATCCAAATGACCCTTACACTTTGTATACCACTGA TGTATCGGCCATTTATCTCAATACTGATCTATATGGGTCACACCCTGTGTACATGGATCTCAGAAATGAAGGTGGCAAAG CTTATGCACATGGTGTTCTGCTGCTGAATAGCAATGGAATGGATGTGTTCTACAGAGGAACCTCTCTGACATACAAGGTT ATTGGTGGTGTGCTTGATTTTTACTTCTTTGCAGGACCCACCCCTTTGAATGTTGTTGATCAGTACACTTCCTTAATTGG CAGACCTGCTCCAATGCCTTACTGGGCTTTCGGTATGATCTACATTTAACTCTCTTATCATTGTATTGCATATTTTGTTT AAGACCAAATATGTAGATAGAGGAACTACCAATAAAGAAAACAAGGGCTTATAACAAATAATACTTGATATGTTTGCTTT AATTCAATGAGTTTCATGGTGTATGGGATTGCAGGAGCATAATGCCTCTGAGCATAATGTTTTCAACTACATGTTTACTT GAATGCACATGTTTACAATCGTACATTCCTTAGTCCTCTATTATGGCAATTGTGAGCTTCTTTTGAAATAAATGGATTAT CATTTTTATTTAAGGATAGCCAAATCAACTCATGACACATTATTAAGCCGTAAACTAACAAAATGCTCACAATTGCTATC AGATAACAAATTGTTAAATGTGGAAGGAAAGACTAACAGAAGGACCTAATTTTAACATCAGAAAAAATTAGGAAGAAAAA ACACATAATTGAGAGTATAAGTATCAAAACCACACTACAGTGGAAGTAAAAAGACTAAATGTGTTTGACCCAAAAAAAAG AGACTAGAAGTATAATTATCTTCTTCTTTTTTCATTTTGCTATAGAGATGGATTGTATATTTCAATCAAAATAAGTTATT GCAATCATGCCTCGCAAATAAGATTTGCCTTGGTTTATGGAAATATATCGGTTAGCATGTCTGTTTGATCTACCATTATG AAGTTTTTTGTAAAAAGTATCTGACCAATATGCTCACTTATTATGATTTGTTGTAATGTAGGATTCCACCAGTGCAGATG GGGCTATCATAACCTCTCTGTTATTGAAGATGTTGTTGAGAATTACAACAAGGCTAAAATTCCACTTGATGTGATCTGGA ATGATGATGATCACATGGATGGGAAAAAGGACTTCACACTCAATCCAGTTAACTACCCTCGTCCGAAGCTTTTAAACTTT CTGGAGAGAATACATGGCATTGGCATGAAATATATAGTCATCGTTGATCCCGGAATTGCAGTTAACTCCAGTTATGGTGT ATATCAGAGGGGCATGGCTAATGATGTTTTCATCAAGCATGAGGGTGAGCCCTTCTTGGGTCAAGTTTGGCCAGGAGCAG TTTACTTTCCTGATTTTCTCAATCCAAGCACAGTTTCTTGGTGGGGTGATGAGATCCGCCGCTTTCATGAACTTGTTCCT GTTGATGGCCTATGGATTGACATGAATGAAGTTTCAAATTTCTGCACTGGGAAGTGCACAATTCCTGAGGGTAAGGTGTG CCCAAGTGGAACAGGACCTGGATGGATATGTTGCTTAGATTGTAAAAATATTACAAGCACACGGTGGGATGAACCTCCCT ACAAAATTAATGCTTCAGGAGTACAGGCACCTATAGGCTTTAAAACTATAGCCACTAGTGCAGTTCACTATAATGGTGTT TTGGAGTATGATGCTCACAGTATTTATGGCTTTTCTCAAACCATTGCAACTCACAAGGGCCTTCAAGGGATTCAAGGAAA ACGACCTTTTATATTGACCCGCTCCACTTATGTGGGTTCAGGCAAATATGCTGCACATTGGACTGGTGACAATAAGGGCA CATGGGAGGATTTGAGATACTCAATATCTACAGTGCTCAATTTTGGAATATTTGGGGTGCCAATGGTTGGTTCTGATATA TGTGGTTTCTATCCGGCACCCACTGAAGAGCTTTGCAATCGGTGGATTGAAGTTGGTGCTTTCTACCCTTTCTCAAGGGA CCATGCAAACTACTACTCCCCTAGACAAGAGCTTTACCAATGGGAGTCAGTAGCAGAGTCTGCTAGAAATGCATTGGGGA TGAGGTACAAGCTTCTCCCTTATTTCTACACCTTGAACTATGAGGCTCATACTAGTGGAGTACCAATTGCCAGGCCACTT TTCTTCTCATTTCCAACTTACACTGAATGTTATGGCCTCAGCACCCAGTTCTTGCTTGGGAGCAGCCTAATGATTTCTCC TGTACTTGAGCAAGGAAAGACACAAGTTAAGGCACTCTTTCCTCCAGGAACCTGGTACAGTTTGTTTGACTTAACACAAG CCCTTATTTCAAAAGATGGAGCCTATGTTACCCTTGACGCGCCGCTCAACGTGGTCAATGTGCATTTGTATCAGAACACC ATTCTTCCGATGCAACAGGGTGGATTGATAGCCAAGGATGCTAGAATGACACCCTTCAGCCTCATTGTGACCTTTCCAGC TGATTCAACTGAAGGAGAAGCTACAGGGATCCTATTCCTTGATGATGACGAGCTTCCAGAAATGAAGCTTGGAAATGGTT ATTCAACCTACATTGATTTCTACGCAAATGCCAAAGAAGGAACTGTGAAAGTTTGGTCAGAAGTCCAAGAGGGCAAGTTT GCTCTAGATAAAGGTTGGGTTATTGACACCATAAGTGTACTGGGATTAAATGGAAATGGGACACTACCTACAATTGAGAT AGATGGAGAACCACCAAGGGGTGTCTCAAATGTGACAATTGCCACATATGAACAGAAGTACTTGCACGGTCTAGGAGACG GAGAAAAGAAGTTAGTGATGGTAGGGTTGAAGGGCTTGAATATCCCTATAGGTAAAAACTTTGCTATGACCTGGAAGATG GGATCATAAGTTGAGATTATCTCATCTTAATTGTGACTTAGTAACTTTTATGTTTTCGACAAACCGTGTTAGTGCCGTAG AAGGAGAGGAGGTTAGCTACAATGAAGCTCGTCCTTCCCGATTTATACCGCGAAGCTTTAGGCTTAAGATGTATAAGTTA TATTGAGTCTTTAAAATGTTTGAATTCAAATACCATTCTACCTTTGATGCCTATATTAGAATCCTCCATTATCAGATATT CGTGTGGTAAAATCAAACGTATCTATTATATAAATCTAGTCAAG
CDS sequence (LotjaGi5g1v0340500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGTTCTCCTAATCCTTTAGCTTCTCTTTGTTTCTTTTCACTTCTTCTAACTTGCTTTCTGTGTGTGGCTGAAGAAGC TAACTCTTCTTCTCCCAAGGCAAACAAAATTGGCCAAGGCTACCGTTTGATATCTATTGAAGATGCCCCTGATGGTTCCA TCATGGGGATTCTCCAAGTTAAGGAGAAGAACAATATCTATGGTCCTGACATTCCCCTTTTACGATTCTATGTCAAGCAC GAAACTGATAATCGTTTGCGGGTATACATCAGTGATGCAAAGAGTCAAAGGTGGGAGGTTCCTTATGATCTTTTGCCAAG GGAGAAACCACCTGCTTTGAAGCAGAACATTAAGAGGTTGAGGAAGAATCAAATATCAGTGTCAGAGTACTCTGGCTCTG AGCTTGTCTTCAGTTACACTACAGACCCGTTTAGCTTTGCAGTGAAAAGGAAGTCCAATGGAGATACCCTTTTTAATTCC AGCTCTGATGAATCAGACCCATTTGGCCCATTGGTTTTCAAGGACCAGTACCTGGAAATTTCTACCAAGTTGCCCAAAGA AGCCTCCTTGTATGGTTTGGGGGAAAACACACAACCAAATGGGATCAAACTGAATCCAAATGACCCTTACACTTTGTATA CCACTGATGTATCGGCCATTTATCTCAATACTGATCTATATGGGTCACACCCTGTGTACATGGATCTCAGAAATGAAGGT GGCAAAGCTTATGCACATGGTGTTCTGCTGCTGAATAGCAATGGAATGGATGTGTTCTACAGAGGAACCTCTCTGACATA CAAGGTTATTGGTGGTGTGCTTGATTTTTACTTCTTTGCAGGACCCACCCCTTTGAATGTTGTTGATCAGTACACTTCCT TAATTGGCAGACCTGCTCCAATGCCTTACTGGGCTTTCGGATTCCACCAGTGCAGATGGGGCTATCATAACCTCTCTGTT ATTGAAGATGTTGTTGAGAATTACAACAAGGCTAAAATTCCACTTGATGTGATCTGGAATGATGATGATCACATGGATGG GAAAAAGGACTTCACACTCAATCCAGTTAACTACCCTCGTCCGAAGCTTTTAAACTTTCTGGAGAGAATACATGGCATTG GCATGAAATATATAGTCATCGTTGATCCCGGAATTGCAGTTAACTCCAGTTATGGTGTATATCAGAGGGGCATGGCTAAT GATGTTTTCATCAAGCATGAGGGTGAGCCCTTCTTGGGTCAAGTTTGGCCAGGAGCAGTTTACTTTCCTGATTTTCTCAA TCCAAGCACAGTTTCTTGGTGGGGTGATGAGATCCGCCGCTTTCATGAACTTGTTCCTGTTGATGGCCTATGGATTGACA TGAATGAAGTTTCAAATTTCTGCACTGGGAAGTGCACAATTCCTGAGGGTAAGGTGTGCCCAAGTGGAACAGGACCTGGA TGGATATGTTGCTTAGATTGTAAAAATATTACAAGCACACGGTGGGATGAACCTCCCTACAAAATTAATGCTTCAGGAGT ACAGGCACCTATAGGCTTTAAAACTATAGCCACTAGTGCAGTTCACTATAATGGTGTTTTGGAGTATGATGCTCACAGTA TTTATGGCTTTTCTCAAACCATTGCAACTCACAAGGGCCTTCAAGGGATTCAAGGAAAACGACCTTTTATATTGACCCGC TCCACTTATGTGGGTTCAGGCAAATATGCTGCACATTGGACTGGTGACAATAAGGGCACATGGGAGGATTTGAGATACTC AATATCTACAGTGCTCAATTTTGGAATATTTGGGGTGCCAATGGTTGGTTCTGATATATGTGGTTTCTATCCGGCACCCA CTGAAGAGCTTTGCAATCGGTGGATTGAAGTTGGTGCTTTCTACCCTTTCTCAAGGGACCATGCAAACTACTACTCCCCT AGACAAGAGCTTTACCAATGGGAGTCAGTAGCAGAGTCTGCTAGAAATGCATTGGGGATGAGGTACAAGCTTCTCCCTTA TTTCTACACCTTGAACTATGAGGCTCATACTAGTGGAGTACCAATTGCCAGGCCACTTTTCTTCTCATTTCCAACTTACA CTGAATGTTATGGCCTCAGCACCCAGTTCTTGCTTGGGAGCAGCCTAATGATTTCTCCTGTACTTGAGCAAGGAAAGACA CAAGTTAAGGCACTCTTTCCTCCAGGAACCTGGTACAGTTTGTTTGACTTAACACAAGCCCTTATTTCAAAAGATGGAGC CTATGTTACCCTTGACGCGCCGCTCAACGTGGTCAATGTGCATTTGTATCAGAACACCATTCTTCCGATGCAACAGGGTG GATTGATAGCCAAGGATGCTAGAATGACACCCTTCAGCCTCATTGTGACCTTTCCAGCTGATTCAACTGAAGGAGAAGCT ACAGGGATCCTATTCCTTGATGATGACGAGCTTCCAGAAATGAAGCTTGGAAATGGTTATTCAACCTACATTGATTTCTA CGCAAATGCCAAAGAAGGAACTGTGAAAGTTTGGTCAGAAGTCCAAGAGGGCAAGTTTGCTCTAGATAAAGGTTGGGTTA TTGACACCATAAGTGTACTGGGATTAAATGGAAATGGGACACTACCTACAATTGAGATAGATGGAGAACCACCAAGGGGT GTCTCAAATGTGACAATTGCCACATATGAACAGAAGTACTTGCACGGTCTAGGAGACGGAGAAAAGAAGTTAGTGATGGT AGGGTTGAAGGGCTTGAATATCCCTATAGGTAAAAACTTTGCTATGACCTGGAAGATGGGATCATAA
Protein sequence (LotjaGi5g1v0340500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGSPNPLASLCFFSLLLTCFLCVAEEANSSSPKANKIGQGYRLISIEDAPDGSIMGILQVKEKNNIYGPDIPLLRFYVKH ETDNRLRVYISDAKSQRWEVPYDLLPREKPPALKQNIKRLRKNQISVSEYSGSELVFSYTTDPFSFAVKRKSNGDTLFNS SSDESDPFGPLVFKDQYLEISTKLPKEASLYGLGENTQPNGIKLNPNDPYTLYTTDVSAIYLNTDLYGSHPVYMDLRNEG GKAYAHGVLLLNSNGMDVFYRGTSLTYKVIGGVLDFYFFAGPTPLNVVDQYTSLIGRPAPMPYWAFGFHQCRWGYHNLSV IEDVVENYNKAKIPLDVIWNDDDHMDGKKDFTLNPVNYPRPKLLNFLERIHGIGMKYIVIVDPGIAVNSSYGVYQRGMAN DVFIKHEGEPFLGQVWPGAVYFPDFLNPSTVSWWGDEIRRFHELVPVDGLWIDMNEVSNFCTGKCTIPEGKVCPSGTGPG WICCLDCKNITSTRWDEPPYKINASGVQAPIGFKTIATSAVHYNGVLEYDAHSIYGFSQTIATHKGLQGIQGKRPFILTR STYVGSGKYAAHWTGDNKGTWEDLRYSISTVLNFGIFGVPMVGSDICGFYPAPTEELCNRWIEVGAFYPFSRDHANYYSP RQELYQWESVAESARNALGMRYKLLPYFYTLNYEAHTSGVPIARPLFFSFPTYTECYGLSTQFLLGSSLMISPVLEQGKT QVKALFPPGTWYSLFDLTQALISKDGAYVTLDAPLNVVNVHLYQNTILPMQQGGLIAKDARMTPFSLIVTFPADSTEGEA TGILFLDDDELPEMKLGNGYSTYIDFYANAKEGTVKVWSEVQEGKFALDKGWVIDTISVLGLNGNGTLPTIEIDGEPPRG VSNVTIATYEQKYLHGLGDGEKKLVMVGLKGLNIPIGKNFAMTWKMGS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| SignalP_GRAM_NEGATIVE | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 6 | 6 | - | – | |
| SignalP_GRAM_POSITIVE | 1 | 29 | 29 | - | – | |
| SignalP_EUK | 1 | 24 | 24 | - | – | |
| Phobius | 1 | 24 | 24 | - | – | |
| Phobius | 7 | 19 | 13 | - | – | |
| PANTHER | 10 | 925 | 916 | 0.0 | – | |
| PANTHER | 10 | 925 | 916 | 0.0 | – | |
| Phobius | 20 | 24 | 5 | - | – | |
| Phobius | 25 | 928 | 904 | - | – | |
| Gene3D | 35 | 297 | 263 | 3.8E-85 | – | |
| SUPERFAMILY | 40 | 284 | 245 | 5.96E-41 | ||
| Pfam | 58 | 185 | 128 | 1.0E-34 | ||
| CDD | 178 | 296 | 119 | 7.34386E-26 | – | |
| Pfam | 189 | 256 | 68 | 9.4E-8 | ||
| Pfam | 277 | 768 | 492 | 1.2E-149 | ||
| SUPERFAMILY | 287 | 679 | 393 | 9.27E-87 | ||
| CDD | 296 | 676 | 381 | 0.0 | – | |
| Gene3D | 298 | 663 | 366 | 4.8E-149 | – | |
| ProSitePatterns | 449 | 456 | 8 | - | ||
| Gene3D | 664 | 764 | 101 | 2.3E-35 | ||
| SUPERFAMILY | 681 | 761 | 81 | 1.51E-16 | – | |
| Gene3D | 766 | 928 | 163 | 2.1E-31 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Catalytic activity | Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic. | ||
| Molecular function | Hydrolase activity, hydrolyzing O-glycosyl compounds | Catalysis of the hydrolysis of any O-glycosyl bond. | ||
| Biological process | Carbohydrate metabolic process | The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule. | ||
| Molecular function | Carbohydrate binding | Interacting selectively and non-covalently with any carbohydrate, which includes monosaccharides, oligosaccharides and polysaccharides as well as substances derived from monosaccharides by reduction of the carbonyl group (alditols), by oxidation of one or more hydroxy groups to afford the corresponding aldehydes, ketones, or carboxylic acids, or by replacement of one or more hydroxy group(s) by a hydrogen atom. Cyclitols are generally not regarded as carbohydrates. |
Expression pattern of LotjaGi5g1v0340500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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