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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0348700 |
| Transcript ID | LotjaGi5g1v0348700.5 |
| Related isoforms 4 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phospholipase-like (PEARLI 4) family protein; TAIR: AT4G35110.1 phospholipase-like protein (PEARLI 4) family protein; Swiss-Prot: sp|Q9M2H6|MCC28_ARATH MATH domain and coiled-coil domain-containing protein At3g58400; TrEMBL-Plants: tr|A0A072VRU0|A0A072VRU0_MEDTR Plant phospholipase-like protein; Found in the gene: LotjaGi5g1v0348700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:66451613..66455686) extracted from Lotus japonicus Gifu genome v1.2.
AGAGTGTGTTACTATCGAGCCTTCTATTTTTTTATTGTGAAACTTTGAAAAGCGGTGAAATCTGCTTCAGTCTTCTTTCT TTCTTTGTTTCATGGGAGTATTTTAATGGTTCATTGGTCAAAGTGTGTGCAAAATTCTAAATTTCTAATCACACACAACA GCTTTGGTCAAAAAACAAACGCTTCCTCCTACATCTTCTCATTTTTTTTCTCATTCCTTGATTGTATGCTGAGAAAAAGA AAATTAATAACAAACAAAACCACATATTTCTCAACAAACCTGATACTCTTTGATTTGCAACTTGTGGCTGGCTTGCCTAC AACAACAACACCTACCTCTTCAACCTTGCATCACCATCTTCTTTGACTTCTTAGGTTGCTGCTTTTTGAATCCTTTTTCT TGTGTTGATTTTTCCTCATTTGGTGTTCTGGTTTCTTTGTTTCATGGGCTGCTGTATGTGTCTAGTTTCAGTTTCTACTG GATTTGTGTGTGTTCAAGTTTTCGTGTTTGATTTTCTGAGATTTGTTTTGATAATACTAAGGTTTTAAGAAATATGCATT GTAAATGTAAAACAAAACTTTCTGGAAAGTGTTTTATGTTTCCAATGATAACTTCTGACAAGTGTGAGTGGAAGTACAGA AAAAAGTTAAACCCTGTTTCTTCTTCTTTGTTTTATCCCCCTTCTCTTGGAAGGGAGTGAATTTGATTGGATAGAATAGG AGATGAAAAGTTTCACAGAAAATATTGATTTTGTTAGGCTCCCTATACTTTTTGTTTTATATCTTTTTAATAAAATTTTG TGTCTTGCTCAGATTTGGCTTGGGATTTGTGTGTTCCCTTTTTCTTTGTGTTATCATATATTGTGATTTAATTGAAGTTT CTTGTGTGTATTGGATGAAACAGGTACAGTAGGTTCAGTTGGTGAGACTTGGAAAGAGAAAAGGATGGCTCAAACTGGAA GAGTTATGCCAAATTGTTTATATGCAGCTAATCCCTACCATGAATGCACTGAGGCATGCTTGCATAAGATCAAGGAAACC AAGCTGCCACCTAAAACTAAGAAGACTTCTGGTTAGTTTTATTTTCTGACTTTTCCCTGTTTATGCACTCTGTGTATTTG ATTTATTGTCTGACAGAAAATTCAATTTTCACTGTTTTTGGCCTATCCTGAATTTTTTTTTTCCTTCTTTCTGGAATTTA GTTACTAATGAGAATCAATTAGATGTTGATTTCATAAGATGATTTGTGAATAACTCCTAATTGATGTTAAATAACTTGCT AGCTGTGAATCTCTGAACACTTGAAGATCTGTGTGTTTTTTTCTTTCTATGAAAGATTATCGCAGAAGTGTTACAGATGG TGAGCTAGGGAAAAAGATGAATGAAGAAAAACGCACCAACTCAGGTTGTCCTAAAGCTTCTAATCCTTACCATGTGTGTG GTCATACTTGTCCCAAAACAATGTCAGGAGCTGATTCAGGTTTATATGAACAGTAAAAATAATTTACTTTTTTCTTTTAC CCAATTTAACTGGTTATACAGTGTGTTTTCTTGGATTGAATCAATTTTTGGGTAAGATTTCTCCTCAGGTCCAACCTGTT CTTACAGAAATACACCTATAGAATCAATTTTTACTGATGTCATGTTAGGTTTCATAGTGAAATGTGAAAGGATCGCATCT AGTTAGAAGAAACTAAGTTTAGTACTAGTTTTTTAAAAGTATGCACATTGATTTTGTGTAAATTGAGAAACCAATCATTC AGTGAATTTCAGTGTTTCTTCCGTTTTAGATATGTCATCTTATCCACTCTTTTGATTCAAATGAAAGTATGAAACTATGT TTGTTGTTTATCTACAATTTAATCTAGAAACATATCCATTTGGAGACTGAAAATATAAACGGTGGTCTCTTTTGATATGA TTCAGACTTCAATAGGTTGCGTACAAATAATGTAAACTGCATTGAAACTGTGATTTCGTCTACGACAAAAAAACATTTGA CTGTCCATCCCATAAATCTGCAATATCTATGTAGTGCATGTTTGGATACAGGGTAGAACCTAAAACATTACAGTAGATTT AAAATCATGATGAACAGTCACAAAAGTTGAAAGAAGTTGGTTTTATCCACTGTCATTTGGTTGATGTGATTTTTCACAAT GTATCCAAAGATGCACTGTTAATAAAGTTGCTAGCAAGTTTTGTCTGCTAATCTGTTTGACTAGTTTACCAATTTTTCTT TAAGATGATAAAGAGATCATTGATATACCGAGTGAGCTTAACTTTCAGTCACAATGAATATGTTTCTGACTGAACTCTCT CAAATTGCAGGTGTGATTCCATTGAAGTTTGGCAGTAAAAAGAAGCTGGGTTCTAAGCCAGAACTTCCTGTTCTTGACAA TATTCCAGCCTCAAAAATTGGAGCTATATACCTCTCTGATGCTACATCACCAATATCAAATTACTATGAAAAGAAAAAGG TAAAGCCAAAAAGCAATGAACTAATACCAGTTTCTGGAGAATTACACAAGGTAGTGCCATCTCTTTCCTCACATTCTCTT TAGACAATATTTCTTTTTCAAAATTTTGTGATGTTCATAAATAAGTTTTTAGTCACTCATTTTCTAGTTAGATTTGGTTT TATAAACCAATGAGTTGTATAAATCATGTAAAAATTAAAATCACTATTATCTTGGGTGATCAGTAATATTTTGATACATG TTATAAACTGAAATTTTTGAAGACTCATGTCAAAATATTTCCGGACCACCTAAGGTTGTGGTTAATTTACCTCATATTCA CTTGGAGTGGTTTAGACTTTACAAACCCAAACAAAAATATTGCTGACTTGTCTCTTTCCCTTGTTTTCTTTGACCAAGCC TGCCAATCACAAAGCAGAATCAGAGAATGGTTGTGAGCATCTTGCCGTCCCAGTGAAAACAAAGCAAGAAGGGGACAAAA ATTCTTCACCCAAAGTTGTTCCAATCACAACTTCTGTTGATGACACAGGATCAGAAGCTGTCACCACAAAGTCCCTTTGT GGGTCCTCCAAACATTTCTGTTCTTCTGATGACATTGATGATCAAGACAGTGATGATGATAATGATGGAGAGGAGACTGA GTCTGTGGTTTCTGAGACACGTGTCCCAGTTGGAAGATATCATGTCAAAGAAAGCTTTGCTCCAATTCTGAGATCCATCT TTGAGAAATATAAAGACATAGGAGCAAGTTGTCACTTGGAATCACTTGTTATGAGGTCCTATTACATTGAGTGTGTGTGC TTTGTGGTTCAAGAGTTGCAATCCACCACAATCATGCAATTAACAAAGTCCAAAATCAAGGAATTGTTAGCTATTCTTAA GGACATTGAATCTGCTCAGCTTCGTGTGGCGTGGTTGCGTACCATAGTGGATGAAATTGCTGAGAACATTGAGCTCTTCA GTGAGCACCGCGACGTCGAGGCGGCGAAGGCGAACTATGATCTTGAAATGGAGAAGTTGAGGAAAGAGCTGGAGTCAGAA AATGAAATTTTGGTGCAGAAAGAGAAAGAGGTGAGTGATATTAAAACAAAGATTGAAGATATCAAAGAGCATTTGAGTGA GCTTGAGGTGAAGGCTTCTGATTTGGATAAGAACTTGTTGTCTATCAAGTCCAAGGTTCAGAATTTGGATAGCAAGTCCT TGCTAGATGATCTACTGTGATATTATTCGATCGATCAGCTGCTTCATTTTTCTCATAATTAATTATGAAACCTGGAAACT AGGCATTGAAGCTTCTCCTGGTCAGAATTAATTATGATTTTATAATCAATTGTAGAAGGACTTTTAAATTTATGTTTGGC TAATTGGTATGTCTTTAGAATGTGGTTGTAATAGTTACTTAACAAGTAGAGTTTGCTGCTGAATAAACGCATGGGAGGTA TAGGTAATGTGGTAAGAATACATATTACAACCCGACACAAATGCACTGCAATTTTTTATTTATATTGATTATACTGTCCC ATCAACATTTTGGTCTGTTTTGGTCTTAGAACTGGTTATGTGAACCCCTCACTGGACCTTCATTAATTTATTTA
CDS sequence (LotjaGi5g1v0348700.5) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCAAACTGGAAGAGTTATGCCAAATTGTTTATATGCAGCTAATCCCTACCATGAATGCACTGAGGCATGCTTGCA TAAGATCAAGGAAACCAAGCTGCCACCTAAAACTAAGAAGACTTCTGGTGTGATTCCATTGAAGTTTGGCAGTAAAAAGA AGCTGGGTTCTAAGCCAGAACTTCCTGTTCTTGACAATATTCCAGCCTCAAAAATTGGAGCTATATACCTCTCTGATGCT ACATCACCAATATCAAATTACTATGAAAAGAAAAAGGTAAAGCCAAAAAGCAATGAACTAATACCAGTTTCTGGAGAATT ACACAAGCCTGCCAATCACAAAGCAGAATCAGAGAATGGTTGTGAGCATCTTGCCGTCCCAGTGAAAACAAAGCAAGAAG GGGACAAAAATTCTTCACCCAAAGTTGTTCCAATCACAACTTCTGTTGATGACACAGGATCAGAAGCTGTCACCACAAAG TCCCTTTGTGGGTCCTCCAAACATTTCTGTTCTTCTGATGACATTGATGATCAAGACAGTGATGATGATAATGATGGAGA GGAGACTGAGTCTGTGGTTTCTGAGACACGTGTCCCAGTTGGAAGATATCATGTCAAAGAAAGCTTTGCTCCAATTCTGA GATCCATCTTTGAGAAATATAAAGACATAGGAGCAAGTTGTCACTTGGAATCACTTGTTATGAGGTCCTATTACATTGAG TGTGTGTGCTTTGTGGTTCAAGAGTTGCAATCCACCACAATCATGCAATTAACAAAGTCCAAAATCAAGGAATTGTTAGC TATTCTTAAGGACATTGAATCTGCTCAGCTTCGTGTGGCGTGGTTGCGTACCATAGTGGATGAAATTGCTGAGAACATTG AGCTCTTCAGTGAGCACCGCGACGTCGAGGCGGCGAAGGCGAACTATGATCTTGAAATGGAGAAGTTGAGGAAAGAGCTG GAGTCAGAAAATGAAATTTTGGTGCAGAAAGAGAAAGAGGTGAGTGATATTAAAACAAAGATTGAAGATATCAAAGAGCA TTTGAGTGAGCTTGAGGTGAAGGCTTCTGATTTGGATAAGAACTTGTTGTCTATCAAGTCCAAGGTTCAGAATTTGGATA GCAAGTCCTTGCTAGATGATCTACTGTGA
Protein sequence (LotjaGi5g1v0348700.5) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAQTGRVMPNCLYAANPYHECTEACLHKIKETKLPPKTKKTSGVIPLKFGSKKKLGSKPELPVLDNIPASKIGAIYLSDA TSPISNYYEKKKVKPKSNELIPVSGELHKPANHKAESENGCEHLAVPVKTKQEGDKNSSPKVVPITTSVDDTGSEAVTTK SLCGSSKHFCSSDDIDDQDSDDDNDGEETESVVSETRVPVGRYHVKESFAPILRSIFEKYKDIGASCHLESLVMRSYYIE CVCFVVQELQSTTIMQLTKSKIKELLAILKDIESAQLRVAWLRTIVDEIAENIELFSEHRDVEAAKANYDLEMEKLRKEL ESENEILVQKEKEVSDIKTKIEDIKEHLSELEVKASDLDKNLLSIKSKVQNLDSKSLLDDLL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 41 | 41 | 3.6E-127 | – | |
| PANTHER | 1 | 41 | 41 | 3.6E-127 | – | |
| PANTHER | 82 | 382 | 301 | 3.6E-127 | – | |
| PANTHER | 82 | 382 | 301 | 3.6E-127 | – | |
| Pfam | 140 | 379 | 240 | 1.9E-58 | ||
| MobiDBLite | 173 | 195 | 23 | - | – | |
| MobiDBLite | 175 | 189 | 15 | - | – | |
| Coils | 299 | 368 | 70 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0348700.5, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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