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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0355400 |
| Transcript ID | LotjaGi5g1v0355400.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | heat-inducible transcription repressor (DUF639); TAIR: AT5G23390.1 polygalacturonase inhibitor (DUF639); Swiss-Prot: sp|Q9YH99|EYA3_CHICK Eyes absent homolog 3; TrEMBL-Plants: tr|A0A072W2J7|A0A072W2J7_MEDTR Plant/T32G24-2 protein; Found in the gene: LotjaGi5g1v0355400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67064184..67070925) extracted from Lotus japonicus Gifu genome v1.2.
TTATCTTCCATTTGTTAAAAAAAATAAAAATTACCAACCCAACCGAATGCATTTGCAGATCATCGATCTCGATCGATCGA ACTGAATGGAAATGGAAATGGAGGAGAATGGCAGTGAAAACAAGTCAGGAGGAATGTGGGAAAATTTCCTCCGTAACCAC CAGAACTCTTTGAAATCCCTTTTCCTCCGCAACTCCTCCTCCTCCAAGAACAAAACCGATACCACCGCCGATGACTCCGC CGTCAATTCCCCAAAACCCATCCCTCTGCTCTCTCCGCTCGCCAACTCCGTCGTCGTCCGCTCTTCCAAGTCTCATCCAC TCTCTCTCATCCACTCTCTCTTCAATTTCATTCGCATTCTCACAATTTCAATTTCCATTGCAGGATCCTCGGAATTTCAA CCGAGGAATTGCAGCACGCCTTCGATTCCGAACTCCCTCTCGGCGTCAAAGAGCTTCTCACCTACGCTAGGAACCTTCTG GAGTTTTGCTCCTACAAGGCGCTTCACAAGCTCAGCAAATCCTCCGATTATCTCGCCGATAAGGATTTCCGTCGATTAAC CTATGACATGATGCTCGCCTGGGAAACCCCCAGCGTCCACACTGATGTAACCATTTCCTCTTTCAATTCATGCATCAGAT CAATCATGCTCATGCTCATGCTCATGCTCATGCTCATTTTCATGTTTTGTGCACAATTGCAGGAAACACCACCACCTTCA AGTAAAGATGAACACGGCGGCGATGACGACGAAGCCTCATTGTTTTATTCAAGTTCCACAAATATGGCTGTTCAGGTTAC ACAATTCCTCATTGAATAGAATAAGTATAAATACAGTAGTAGCAGGCAGCAACTTCTTCGATTATCGACTAATTAATAAT GCAATGTTGGTTGCTATTATCTGTAATTGTTATGAATTTTTAGGTTGATGACCAGAAGACGGTTGGTCTCGAGGCTTTCT CGCGAATAGCTCCTGTGTGTGCTCCTATTGCTGATGTGATAACTGTACACAATCTATTTGATGCACTCACCAGTTCCTCT GGGCGGCGGCTTCATTTTCTTGTTTATGACAAATACATAAGATTCCTTGACAAGTGCGTTTGTTTTCGTTTGGTATCGTT CGGTTCATTGCTTGCGTTATCTGCATTGATCGTGTGTGTGCTTTCTGACGGCAAGTTACGTGCAGGGTTATTAAGAACTC TAAAAATGTGCTGGCCAGTTCTGTTGGAAGTCTCCAGCTTGCTGAGGAAGAGATTGTCCTTGATGTTGATGGGACAATTC CAACTCAACCGGTTCTTCAACATATTGGAATCTCTGCATGGCCTGGTAAGACATTCTAATACTCAAATTGGATGTATAAG TTGCAATGGTCTTGTTGTCCCTGTTGATTATTGACTGTCACTTGTGCATTGAGTGGCCCTGAGATCATGCTAGGATGATA GAGGATTCCTGTAGCTTGTGTAGGTGGCTAGCAACTCCATTTTCTCGTTCTGTCCCTTTATGTAGGATGAAGTCATAAAA TAATTGACTAGCTGAATGATTATTCCTTTTCTTTTATTTATTGTTATTGTTATTCATAGAAATTTTAATAAAAAAAGCAT GAATGAAACTTTTGAATTGGATTGAGCAAAGTGCTTTACTTGTTTGAGGATGTTTATTCAAACTCCATTTTCTTGTTCTG TCTGTCCTGCCCTTCATGTAGGATGAAGTCATCAAATAATTGACTAGCTAAATGATTATTCCTTTTCTTTTACTTATTTT TGTTGTTATTCATAGAAATTTTCTTTTTTCCAAGCCTTCTGCTGCGCTACAAATGCACACGCAAACTAAATATCAGTATA TCACAAAGGGATGCGGTCAAATATTTGAACTGAATTATTTCTAGACTGTTCCTGCATTCGCTTGACTTGCTTCAGTTGCA GTTGCTTTTGTTCTTTGCTGTATTTGAAGAGTGATCATTATACTGGTTAGATATAACGAAAGGTATTTTGCATGAAAATC TTAATGGAGTTATCTCCTGGATATAATGCTCTAGGAAAGTCTAGTAAGTTTATTCATTTAAGTCTTTTTATGGCCCTAAA CAATCTTGTCGAAGCAAGTTTGATGAATCCAGCAAATTGAAGTATGTGTGGAGTAAACTGCTGAATATAACACTGTGAAT GCGCCTTTTCTTTCTACTTCATATCTGAACAATGTAGGGTGTGTTTGGAAACCCATCCTTTTTTCTGGTTTGCGACTTTT CAATGCTTGCAAAACGGAAAAGTGCAAATTTTAATAAAAAAGCATGAATGAAACTTTTGAATTGGATTGAGCAAAGTGCT TTACTTGTTTGAGGATGTTTATTCAAACACACACGTAGTAACTAACTGACTAGGAACCTGTGTTCTATACTATGTTTTCC ACTTTTCTTGCCAGTACCTCAAATTTCTGACCTTTGTAGGGCGGTTGACCCTGACTAATTATGCTCTGTACTTTGAGTCA CTTGGAGTTGGTGTGCACGAGAAACCTGTTCGATATGATCTGGGCACAGACCTGAAACAGGTCATAAAGCCTGACTTGAC TGGGCCTCTTGGTGCTCGCCTTTTTGATAAAGCTGTGATGTACAAGTCAACTTCTGTGTACGTTTTCTGTTGACAAATAT CACATATGACCTGTCTACACTCCCTTGCTTTTCCAATTCAAATTTTATGATTTTCCAAAATGTGTTGACAGAGCAGAGCC TGTTTATTTTGAATTCCCTGAATTTAAAGCGAACGTGCGTCGTGACTACTGGTTGGACATTAGTCTGGAGATCCTGCGTG TGCACAAGTTTATTAGGAAATACTACCTGAAAGAGACACAAAAGGCAGAAGTGCTTGCCAGGGCTATTCTCGGCATTTAC CGCTATCGTGCAGTTAGAGAAGCTTTCAAATATTTCTCATCCCACTACAAAACTTTACTTTCTTTTAACCTAGCTGAAGC TCTTCCGCGGGGAGATATGATCTTGGAAACCCTGTCAAATAGCTTAACAAATTTGACTGTTGCTTCTTCTAAACGTAGCT CTCCTCGGAATGTTGATACAAAAAAACAACTGGTAGTGTCTCCAGCATCAGCTGTGGCACTCTTCCGTCTTGGATTCAAA TCAGATAAGTTTGCTGATATTTATGAAGAAACAACTGTTGTTGGTGACATCCGAGTTGGTGAAATAAACCTCTTGGAAAT GGCAGTCAAAAAGTCCCTTCGGGACACTGGAAAAGCAGAAGCTGCCCAGGCAACTGTGGACCAAGTGAAGGTTGAAGGCA TCGATACGAATGTTGCAGTAATGAAGGTTCGATATAGATTCCATTCTGTAGATGTTTGAAAATTGGGAAAGCAAAATCAA ATGTTTGTTATAATATGCTCTAGAAAAATATGCTGTAGAAACAAACCAGAACCACAAATGCTCCTTTAGCACCATCAAAC ACTAATGGACTGAGTCCTAAATGAGTACAAAAAATAAACCTCTTTTTTCTTACTATCATTAGTTCTCTGAAGTGTTCATC TAAGCTCAATATAAATATTTTGCTTCATACTTGAAAAAAAAAATTAATCTGAAAGGCATGCATTTTGGGTTAGGATATCC ATTGAGTGGTTATCCCCTCAAACTCATATTATCAGATTTCCCAAGAGAACGAGGGACAAATTTAAGGATTCTGTGCTTTT ACTTGTATGTGTAATTCTTTTAACTCCTTGCAGGAACTACTATTCCCGGTCATCGAATCTGCTAACCGACTAGAGCGTTT AGCCTCATGGAAAGACTTTTACAAATCAACAGCCTTTTTGCTACTCACTAGTTATATGATTTTAAGGTAATTGTTTATTG TAAAATCAGCGCATGACTAGGTGACCACGCTGATGTTTGTTACTTCATTTTATTTATTGTTTCAAATTGGGTGCTTTCCA CATAATTATCAGTGTCAACCCTCATTTATCAAAACTCTAGGCTGTTCAAAATTCATGGTGACAAATATATTTACTGTATT GAACAATGGGTATATTGGATTCTCAACACTAAAGGATTTTGACTTGTACGTGAATTTCTTTAGTTTTGAACATTCTAAAA GGCCTTTGTGTTGGTTCTTGCCTCAACTGTTCTCCTATTGATGTTGTATATTCATGATGAAACCATTTGAGCTGTCTTGT AAGGCCCAACAATGGTTTCCTAAGTCTCTTAGCATTTTCCGCAATATAAATGAAGAAAGCTCAAGTTCATCACTACTTGG TAATGAAATTCAACATGTGCTGAGTATAAAGAATTAATTCTAAATTACTCAAGATCACATTATCAAAGAGACCCAAAAAT GTAAAATGAAGGAAAGAAATAAATGTGGAAGGATATTAATCAAGGACCTAAGAGTAGTTCTTATATTCAATGATATGCAT TGCATCTCCTTCTCTCCAATGCTTGACATCCTCATTAAGCCTCAAGAACATTGAGTACCCTTGATCCTGTTGTTATCCCA TATGTTTGTTTGTTTTTTTGCTGGTAAGCCCACCTGAAGTAAGATCCACCGTGTTTCTGACACCATTCTACATGCTAATA TTGTTAATCTCTGTGGTTCAACAAGAAGTTGAGAATGTTAAATATCACATTGATGGTTGTTAATAAATTATATTCTTGTG TTAAAAGGCCAGCTTCTATGATGAATAAAGTAGTTAATTAACACTGATGTACAGGGGGTGGATCCATTACTTATTGCCAT CCATATTTGTGGTTGTTGCAATTCTCATGCTTTGGCGGAGGCATTTCAGAAAGGGAAGATCATTAGAAGCCTTCATAGTA ACGCCTCCCCCAAATCGAAATCCAGTAGAACAACTGCTAACATTGCAAGAGGCTATCACACAGTTTGAATCACTTATTCA AGCTGGAAATATTGTTCTCCTAAAAGTAAGAGCTCTTCTACTTGCTCTATTACCACAGGTGCGTATCCTGGTCTTAGTCT ATTTCTTCAAACAATAATGCAAATGTTGTGCATATAGTTACACCAAAATAACTTTTAACATGCATGCAATATCTTTTAGG GTAATATAATAATGTTTGTGCTGCATTTCGTTAATCCACTTTGAATGAAGTAGACATGTTATAAACTATTAGTTAAAAGC ACTTAATATAATACCTTTTGAACAAATGCAAATTAATGCTGCACAAGTAGACTAGTTCATCGGTACAAAATAGCTCACTA TCCCTCTCCATTGCAGAATTTCTTAAAGAAACCATGGGGTAATGCCAAAGAGGCTAAAAAAACGATCATATAAAATTACA GGTAACCACAAGTTTCCTTGGCGATATGGTATTATGCTCTCCCAAAATCCAAAAACACAAATTAATAGCATAAAGAAAAC ATTTCCCTGGTTGTTTACCGCCTTATTCCTGTATACACCGAACTGATCAATAAATGCTCCTCCAACCCCAAACTTCATAG CCATTCATCACCATAAACTCCATAAATATTTTCGAAGTACCGGTCCACCTCACAATGTCAAAGTAATTGGGAAACAGTTC CCAAAAATACAAACAGGCGAAATGCACATATCAAGAGAGGGGACTTTCTGGGATCTATAAATTAGTAATAATCTTATTGA GTACAACTGTCCAAATTAAGAACCTCAGTGTAGTTGGAGCCTTGGATGTCAACCTCTGAGAAACTTCATCTTGATCTCAG TACGTTGTAATGTGTAGAGTAACTACATATTATTAGCTGTCCCCTGCCTGCCTTATTGTTTGTTGACTGAAATAAGTGTA TAACCATATAATTAATATCATCCTTTGAAGCATTGCAAATTTTCTATTTTGAAAAGCTTGAAATATATCATCATAAGTTG TATGATTTGTCACCAAATTGGTTCAGCCAGTTTATGGGAGTGCATGTTTTCACTAGAATCTTTTATAAATTTTTACATTT GTCCTGCAGGCTACGGAGAAGGTTGCACTATTACTGGTATTCATAGCTGCAGTGTTTGCTTTTGTTCCTCCAAAATACAT AATTTTTGTGATATTCTTTGAGTATTACACAAGGGAGATGCCATGTAGGAAAGAATCAAGTGATAGATGGGTAAGGAGGA TGAGAGAATGGTGGATCAGAATACCAGCTGCTCCAGTCGAGCTCATTAAGCCTGACGAGTGCAAGAAAAGAAAATGAAGG GTTGCATTCGTCAGTTATAATTTTGATACCAGCAAAGGTTGATATTATTTTCTGGTTAATTATCCATCATTCATTAACCA CATAGAATCTGTTTGGATGCAAGCCAAAGAACACTTACTGGAGCTTATATAGTGCTTTTTCCGTATATAAGCTCCAATAA GTCCGTATCCAAACACTCGATAGTCTGATTTTTTTATTCTTTTGTCTATTCTTCAAGGGTGAAACCATTTTTGTATTCGG CAGCAAAGTTGTATATTCTCTTGCATCTTATGTGCTTCCCCCTTATACTAAACCTAAGGTGATTAGGAAGTCTTTCATTT TAACACATTGTAAATCCAAACACAAGTAAATCCGAACACACAAGTAGTGTTTGGTGTTCTGTGATAGCTTTTCACTTCTC ATTAATGGATGAGATAACAGTTACAAATATTGTTATGTTTTTGTTAGTTGTTCCTTTGTTTTAAGGTATTTCTCTATTTC TCATTGTCGGTGCATGAAATAATACACTAGGATTAAACCCGTGCGGAGAATCAGCCTTACAATTTGTTAACTTAATTTAA ACCATTTACAAAAAGGATTGTA
CDS sequence (LotjaGi5g1v0355400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAATGGAAATGGAGGAGAATGGCAGTGAAAACAAGTCAGGAGGAATGTGGGAAAATTTCCTCCGTAACCACCAGAA CTCTTTGAAATCCCTTTTCCTCCGCAACTCCTCCTCCTCCAAGAACAAAACCGATACCACCGCCGATGACTCCGCCGTCA ATTCCCCAAAACCCATCCCTCTGCTCTCTCCGCTCGCCAACTCCGTCGTCGTCCGCTCTTCCAAGATCCTCGGAATTTCA ACCGAGGAATTGCAGCACGCCTTCGATTCCGAACTCCCTCTCGGCGTCAAAGAGCTTCTCACCTACGCTAGGAACCTTCT GGAGTTTTGCTCCTACAAGGCGCTTCACAAGCTCAGCAAATCCTCCGATTATCTCGCCGATAAGGATTTCCGTCGATTAA CCTATGACATGATGCTCGCCTGGGAAACCCCCAGCGTCCACACTGATGAAACACCACCACCTTCAAGTAAAGATGAACAC GGCGGCGATGACGACGAAGCCTCATTGTTTTATTCAAGTTCCACAAATATGGCTGTTCAGGTTGATGACCAGAAGACGGT TGGTCTCGAGGCTTTCTCGCGAATAGCTCCTGTGTGTGCTCCTATTGCTGATGTGATAACTGTACACAATCTATTTGATG CACTCACCAGTTCCTCTGGGCGGCGGCTTCATTTTCTTGTTTATGACAAATACATAAGATTCCTTGACAAGGTTATTAAG AACTCTAAAAATGTGCTGGCCAGTTCTGTTGGAAGTCTCCAGCTTGCTGAGGAAGAGATTGTCCTTGATGTTGATGGGAC AATTCCAACTCAACCGGTTCTTCAACATATTGGAATCTCTGCATGGCCTGGGCGGTTGACCCTGACTAATTATGCTCTGT ACTTTGAGTCACTTGGAGTTGGTGTGCACGAGAAACCTGTTCGATATGATCTGGGCACAGACCTGAAACAGGTCATAAAG CCTGACTTGACTGGGCCTCTTGGTGCTCGCCTTTTTGATAAAGCTGTGATGTACAAGTCAACTTCTGTAGCAGAGCCTGT TTATTTTGAATTCCCTGAATTTAAAGCGAACGTGCGTCGTGACTACTGGTTGGACATTAGTCTGGAGATCCTGCGTGTGC ACAAGTTTATTAGGAAATACTACCTGAAAGAGACACAAAAGGCAGAAGTGCTTGCCAGGGCTATTCTCGGCATTTACCGC TATCGTGCAGTTAGAGAAGCTTTCAAATATTTCTCATCCCACTACAAAACTTTACTTTCTTTTAACCTAGCTGAAGCTCT TCCGCGGGGAGATATGATCTTGGAAACCCTGTCAAATAGCTTAACAAATTTGACTGTTGCTTCTTCTAAACGTAGCTCTC CTCGGAATGTTGATACAAAAAAACAACTGGTAGTGTCTCCAGCATCAGCTGTGGCACTCTTCCGTCTTGGATTCAAATCA GATAAGTTTGCTGATATTTATGAAGAAACAACTGTTGTTGGTGACATCCGAGTTGGTGAAATAAACCTCTTGGAAATGGC AGTCAAAAAGTCCCTTCGGGACACTGGAAAAGCAGAAGCTGCCCAGGCAACTGTGGACCAAGTGAAGGTTGAAGGCATCG ATACGAATGTTGCAGTAATGAAGGAACTACTATTCCCGGTCATCGAATCTGCTAACCGACTAGAGCGTTTAGCCTCATGG AAAGACTTTTACAAATCAACAGCCTTTTTGCTACTCACTAGTTATATGATTTTAAGGGGGTGGATCCATTACTTATTGCC ATCCATATTTGTGGTTGTTGCAATTCTCATGCTTTGGCGGAGGCATTTCAGAAAGGGAAGATCATTAGAAGCCTTCATAG TAACGCCTCCCCCAAATCGAAATCCAGTAGAACAACTGCTAACATTGCAAGAGGCTATCACACAGTTTGAATCACTTATT CAAGCTGGAAATATTGTTCTCCTAAAAGTAAGAGCTCTTCTACTTGCTCTATTACCACAGGCTACGGAGAAGGTTGCACT ATTACTGGTATTCATAGCTGCAGTGTTTGCTTTTGTTCCTCCAAAATACATAATTTTTGTGATATTCTTTGAGTATTACA CAAGGGAGATGCCATGTAGGAAAGAATCAAGTGATAGATGGGTAAGGAGGATGAGAGAATGGTGGATCAGAATACCAGCT GCTCCAGTCGAGCTCATTAAGCCTGACGAGTGCAAGAAAAGAAAATGA
Protein sequence (LotjaGi5g1v0355400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEMEMEENGSENKSGGMWENFLRNHQNSLKSLFLRNSSSSKNKTDTTADDSAVNSPKPIPLLSPLANSVVVRSSKILGIS TEELQHAFDSELPLGVKELLTYARNLLEFCSYKALHKLSKSSDYLADKDFRRLTYDMMLAWETPSVHTDETPPPSSKDEH GGDDDEASLFYSSSTNMAVQVDDQKTVGLEAFSRIAPVCAPIADVITVHNLFDALTSSSGRRLHFLVYDKYIRFLDKVIK NSKNVLASSVGSLQLAEEEIVLDVDGTIPTQPVLQHIGISAWPGRLTLTNYALYFESLGVGVHEKPVRYDLGTDLKQVIK PDLTGPLGARLFDKAVMYKSTSVAEPVYFEFPEFKANVRRDYWLDISLEILRVHKFIRKYYLKETQKAEVLARAILGIYR YRAVREAFKYFSSHYKTLLSFNLAEALPRGDMILETLSNSLTNLTVASSKRSSPRNVDTKKQLVVSPASAVALFRLGFKS DKFADIYEETTVVGDIRVGEINLLEMAVKKSLRDTGKAEAAQATVDQVKVEGIDTNVAVMKELLFPVIESANRLERLASW KDFYKSTAFLLLTSYMILRGWIHYLLPSIFVVVAILMLWRRHFRKGRSLEAFIVTPPPNRNPVEQLLTLQEAITQFESLI QAGNIVLLKVRALLLALLPQATEKVALLLVFIAAVFAFVPPKYIIFVIFFEYYTREMPCRKESSDRWVRRMREWWIRIPA APVELIKPDECKKRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 580 | 580 | - | – | |
| PANTHER | 16 | 733 | 718 | 0.0 | – | |
| PANTHER | 16 | 733 | 718 | 0.0 | – | |
| MobiDBLite | 145 | 166 | 22 | - | – | |
| MobiDBLite | 152 | 166 | 15 | - | – | |
| Pfam | 501 | 726 | 226 | 2.7E-68 | ||
| TMHMM | 577 | 599 | 23 | - | – | |
| Phobius | 581 | 599 | 19 | - | – | |
| Phobius | 600 | 638 | 39 | - | – | |
| Phobius | 639 | 659 | 21 | - | – | |
| Phobius | 660 | 664 | 5 | - | – | |
| TMHMM | 665 | 687 | 23 | - | – | |
| Phobius | 665 | 690 | 26 | - | – | |
| Phobius | 691 | 735 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0355400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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