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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0355400 |
| Transcript ID | LotjaGi5g1v0355400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | heat-inducible transcription repressor (DUF639); TAIR: AT5G23390.1 polygalacturonase inhibitor (DUF639); Swiss-Prot: sp|C1G565|CHO2_PARBD Phosphatidylethanolamine N-methyltransferase; TrEMBL-Plants: tr|A0A072W2J7|A0A072W2J7_MEDTR Plant/T32G24-2 protein; Found in the gene: LotjaGi5g1v0355400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67064544..67070487) extracted from Lotus japonicus Gifu genome v1.2.
CTCGGCGTCAAAGAGCTTCTCACCTACGCTAGGAACCTTCTGGAGTTTTGCTCCTACAAGGCGCTTCACAAGCTCAGCAA ATCCTCCGATTATCTCGCCGATAAGGATTTCCGTCGATTAACCTATGACATGATGCTCGCCTGGGAAACCCCCAGCGTCC ACACTGATGTAACCATTTCCTCTTTCAATTCATGCATCAGATCAATCATGCTCATGCTCATGCTCATGCTCATGCTCATT TTCATGTTTTGTGCACAATTGCAGGAAACACCACCACCTTCAAGTAAAGATGAACACGGCGGCGATGACGACGAAGCCTC ATTGTTTTATTCAAGTTCCACAAATATGGCTGTTCAGGTTACACAATTCCTCATTGAATAGAATAAGTATAAATACAGTA GTAGCAGGCAGCAACTTCTTCGATTATCGACTAATTAATAATGCAATGTTGGTTGCTATTATCTGTAATTGTTATGAATT TTTAGGTTGATGACCAGAAGACGGTTGGTCTCGAGGCTTTCTCGCGAATAGCTCCTGTGTGTGCTCCTATTGCTGATGTG ATAACTGTACACAATCTATTTGATGCACTCACCAGTTCCTCTGGGCGGCGGCTTCATTTTCTTGTTTATGACAAATACAT AAGATTCCTTGACAAGTGCGTTTGTTTTCGTTTGGTATCGTTCGGTTCATTGCTTGCGTTATCTGCATTGATCGTGTGTG TGCTTTCTGACGGCAAGTTACGTGCAGGGTTATTAAGAACTCTAAAAATGTGCTGGCCAGTTCTGTTGGAAGTCTCCAGC TTGCTGAGGAAGAGATTGTCCTTGATGTTGATGGGACAATTCCAACTCAACCGGTTCTTCAACATATTGGAATCTCTGCA TGGCCTGGTAAGACATTCTAATACTCAAATTGGATGTATAAGTTGCAATGGTCTTGTTGTCCCTGTTGATTATTGACTGT CACTTGTGCATTGAGTGGCCCTGAGATCATGCTAGGATGATAGAGGATTCCTGTAGCTTGTGTAGGTGGCTAGCAACTCC ATTTTCTCGTTCTGTCCCTTTATGTAGGATGAAGTCATAAAATAATTGACTAGCTGAATGATTATTCCTTTTCTTTTATT TATTGTTATTGTTATTCATAGAAATTTTAATAAAAAAAGCATGAATGAAACTTTTGAATTGGATTGAGCAAAGTGCTTTA CTTGTTTGAGGATGTTTATTCAAACTCCATTTTCTTGTTCTGTCTGTCCTGCCCTTCATGTAGGATGAAGTCATCAAATA ATTGACTAGCTAAATGATTATTCCTTTTCTTTTACTTATTTTTGTTGTTATTCATAGAAATTTTCTTTTTTCCAAGCCTT CTGCTGCGCTACAAATGCACACGCAAACTAAATATCAGTATATCACAAAGGGATGCGGTCAAATATTTGAACTGAATTAT TTCTAGACTGTTCCTGCATTCGCTTGACTTGCTTCAGTTGCAGTTGCTTTTGTTCTTTGCTGTATTTGAAGAGTGATCAT TATACTGGTTAGATATAACGAAAGGTATTTTGCATGAAAATCTTAATGGAGTTATCTCCTGGATATAATGCTCTAGGAAA GTCTAGTAAGTTTATTCATTTAAGTCTTTTTATGGCCCTAAACAATCTTGTCGAAGCAAGTTTGATGAATCCAGCAAATT GAAGTATGTGTGGAGTAAACTGCTGAATATAACACTGTGAATGCGCCTTTTCTTTCTACTTCATATCTGAACAATGTAGG GTGTGTTTGGAAACCCATCCTTTTTTCTGGTTTGCGACTTTTCAATGCTTGCAAAACGGAAAAGTGCAAATTTTAATAAA AAAGCATGAATGAAACTTTTGAATTGGATTGAGCAAAGTGCTTTACTTGTTTGAGGATGTTTATTCAAACACACACGTAG TAACTAACTGACTAGGAACCTGTGTTCTATACTATGTTTTCCACTTTTCTTGCCAGTACCTCAAATTTCTGACCTTTGTA GGGCGGTTGACCCTGACTAATTATGCTCTGTACTTTGAGTCACTTGGAGTTGGTGTGCACGAGAAACCTGTTCGATATGA TCTGGGCACAGACCTGAAACAGGTCATAAAGCCTGACTTGACTGGGCCTCTTGGTGCTCGCCTTTTTGATAAAGCTGTGA TGTACAAGTCAACTTCTGTGTACGTTTTCTGTTGACAAATATCACATATGACCTGTCTACACTCCCTTGCTTTTCCAATT CAAATTTTATGATTTTCCAAAATGTGTTGACAGAGCAGAGCCTGTTTATTTTGAATTCCCTGAATTTAAAGCGAACGTGC GTCGTGACTACTGGTTGGACATTAGTCTGGAGATCCTGCGTGTGCACAAGTTTATTAGGAAATACTACCTGAAAGAGACA CAAAAGGCAGAAGTGCTTGCCAGGGCTATTCTCGGCATTTACCGCTATCGTGCAGTTAGAGAAGCTTTCAAATATTTCTC ATCCCACTACAAAACTTTACTTTCTTTTAACCTAGCTGAAGCTCTTCCGCGGGGAGATATGATCTTGGAAACCCTGTCAA ATAGCTTAACAAATTTGACTGTTGCTTCTTCTAAACGTAGCTCTCCTCGGAATGTTGATACAAAAAAACAACTGGTAGTG TCTCCAGCATCAGCTGTGGCACTCTTCCGTCTTGGATTCAAATCAGATAAGTTTGCTGATATTTATGAAGAAACAACTGT TGTTGGTGACATCCGAGTTGGTGAAATAAACCTCTTGGAAATGGCAGTCAAAAAGTCCCTTCGGGACACTGGAAAAGCAG AAGCTGCCCAGGCAACTGTGGACCAAGTGAAGGTTGAAGGCATCGATACGAATGTTGCAGTAATGAAGGTTCGATATAGA TTCCATTCTGTAGATGTTTGAAAATTGGGAAAGCAAAATCAAATGTTTGTTATAATATGCTCTAGAAAAATATGCTGTAG AAACAAACCAGAACCACAAATGCTCCTTTAGCACCATCAAACACTAATGGACTGAGTCCTAAATGAGTACAAAAAATAAA CCTCTTTTTTCTTACTATCATTAGTTCTCTGAAGTGTTCATCTAAGCTCAATATAAATATTTTGCTTCATACTTGAAAAA AAAAATTAATCTGAAAGGCATGCATTTTGGGTTAGGATATCCATTGAGTGGTTATCCCCTCAAACTCATATTATCAGATT TCCCAAGAGAACGAGGGACAAATTTAAGGATTCTGTGCTTTTACTTGTATGTGTAATTCTTTTAACTCCTTGCAGGAACT ACTATTCCCGGTCATCGAATCTGCTAACCGACTAGAGCGTTTAGCCTCATGGAAAGACTTTTACAAATCAACAGCCTTTT TGCTACTCACTAGTTATATGATTTTAAGGTAATTGTTTATTGTAAAATCAGCGCATGACTAGGTGACCACGCTGATGTTT GTTACTTCATTTTATTTATTGTTTCAAATTGGGTGCTTTCCACATAATTATCAGTGTCAACCCTCATTTATCAAAACTCT AGGCTGTTCAAAATTCATGGTGACAAATATATTTACTGTATTGAACAATGGGTATATTGGATTCTCAACACTAAAGGATT TTGACTTGTACGTGAATTTCTTTAGTTTTGAACATTCTAAAAGGCCTTTGTGTTGGTTCTTGCCTCAACTGTTCTCCTAT TGATGTTGTATATTCATGATGAAACCATTTGAGCTGTCTTGTAAGGCCCAACAATGGTTTCCTAAGTCTCTTAGCATTTT CCGCAATATAAATGAAGAAAGCTCAAGTTCATCACTACTTGGTAATGAAATTCAACATGTGCTGAGTATAAAGAATTAAT TCTAAATTACTCAAGATCACATTATCAAAGAGACCCAAAAATGTAAAATGAAGGAAAGAAATAAATGTGGAAGGATATTA ATCAAGGACCTAAGAGTAGTTCTTATATTCAATGATATGCATTGCATCTCCTTCTCTCCAATGCTTGACATCCTCATTAA GCCTCAAGAACATTGAGTACCCTTGATCCTGTTGTTATCCCATATGTTTGTTTGTTTTTTTGCTGGTAAGCCCACCTGAA GTAAGATCCACCGTGTTTCTGACACCATTCTACATGCTAATATTGTTAATCTCTGTGGTTCAACAAGAAGTTGAGAATGT TAAATATCACATTGATGGTTGTTAATAAATTATATTCTTGTGTTAAAAGGCCAGCTTCTATGATGAATAAAGTAGTTAAT TAACACTGATGTACAGGGGGTGGATCCATTACTTATTGCCATCCATATTTGTGGTTGTTGCAATTCTCATGCTTTGGCGG AGGCATTTCAGAAAGGGAAGATCATTAGAAGCCTTCATAGTAACGCCTCCCCCAAATCGAAATCCAGTAGAACAACTGCT AACATTGCAAGAGGCTATCACACAGTTTGAATCACTTATTCAAGCTGGAAATATTGTTCTCCTAAAAGTAAGAGCTCTTC TACTTGCTCTATTACCACAGGTGCGTATCCTGGTCTTAGTCTATTTCTTCAAACAATAATGCAAATGTTGTGCATATAGT TACACCAAAATAACTTTTAACATGCATGCAATATCTTTTAGGGTAATATAATAATGTTTGTGCTGCATTTCGTTAATCCA CTTTGAATGAAGTAGACATGTTATAAACTATTAGTTAAAAGCACTTAATATAATACCTTTTGAACAAATGCAAATTAATG CTGCACAAGTAGACTAGTTCATCGGTACAAAATAGCTCACTATCCCTCTCCATTGCAGAATTTCTTAAAGAAACCATGGG GTAATGCCAAAGAGGCTAAAAAAACGATCATATAAAATTACAGGTAACCACAAGTTTCCTTGGCGATATGGTATTATGCT CTCCCAAAATCCAAAAACACAAATTAATAGCATAAAGAAAACATTTCCCTGGTTGTTTACCGCCTTATTCCTGTATACAC CGAACTGATCAATAAATGCTCCTCCAACCCCAAACTTCATAGCCATTCATCACCATAAACTCCATAAATATTTTCGAAGT ACCGGTCCACCTCACAATGTCAAAGTAATTGGGAAACAGTTCCCAAAAATACAAACAGGCGAAATGCACATATCAAGAGA GGGGACTTTCTGGGATCTATAAATTAGTAATAATCTTATTGAGTACAACTGTCCAAATTAAGAACCTCAGTGTAGTTGGA GCCTTGGATGTCAACCTCTGAGAAACTTCATCTTGATCTCAGTACGTTGTAATGTGTAGAGTAACTACATATTATTAGCT GTCCCCTGCCTGCCTTATTGTTTGTTGACTGAAATAAGTGTATAACCATATAATTAATATCATCCTTTGAAGCATTGCAA ATTTTCTATTTTGAAAAGCTTGAAATATATCATCATAAGTTGTATGATTTGTCACCAAATTGGTTCAGCCAGTTTATGGG AGTGCATGTTTTCACTAGAATCTTTTATAAATTTTTACATTTGTCCTGCAGGCTACGGAGAAGGTTGCACTATTACTGGT ATTCATAGCTGCAGTGTTTGCTTTTGTTCCTCCAAAATACATAATTTTTGTGATATTCTTTGAGTATTACACAAGGGAGA TGCCATGTAGGAAAGAATCAAGTGATAGATGGGTAAGGAGGATGAGAGAATGGTGGATCAGAATACCAGCTGCTCCAGTC GAGCTCATTAAGCCTGACGAGTGCAAGAAAAGAAAATGAAGGGTTGCATTCGTCAGTTATAATTTTGATACCAGCAAAGG TTGATATTATTTTCTGGTTAATTATCCATCATTCATTAACCACATAGAATCTGTTTGGATGCAAGCCAAAGAACACTTAC TGGAGCTTATATAGTGCTTTTTCCGTATATAAGCTCCAATAAGTCCGTATCCAAACACTCGATAGTCTGATTTTTTTATT CTTTTGTCTATTCTTCAAGGGTGA
CDS sequence (LotjaGi5g1v0355400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGATGCTCGCCTGGGAAACCCCCAGCGTCCACACTGATGAAACACCACCACCTTCAAGTAAAGATGAACACGGCGGCGA TGACGACGAAGCCTCATTGTTTTATTCAAGTTCCACAAATATGGCTGTTCAGGTTGATGACCAGAAGACGGTTGGTCTCG AGGCTTTCTCGCGAATAGCTCCTGTGTGTGCTCCTATTGCTGATGTGATAACTGTACACAATCTATTTGATGCACTCACC AGTTCCTCTGGGCGGCGGCTTCATTTTCTTGTTTATGACAAATACATAAGATTCCTTGACAAGGTTATTAAGAACTCTAA AAATGTGCTGGCCAGTTCTGTTGGAAGTCTCCAGCTTGCTGAGGAAGAGATTGTCCTTGATGTTGATGGGACAATTCCAA CTCAACCGGTTCTTCAACATATTGGAATCTCTGCATGGCCTGGGCGGTTGACCCTGACTAATTATGCTCTGTACTTTGAG TCACTTGGAGTTGGTGTGCACGAGAAACCTGTTCGATATGATCTGGGCACAGACCTGAAACAGGTCATAAAGCCTGACTT GACTGGGCCTCTTGGTGCTCGCCTTTTTGATAAAGCTGTGATGTACAAGTCAACTTCTGTAGCAGAGCCTGTTTATTTTG AATTCCCTGAATTTAAAGCGAACGTGCGTCGTGACTACTGGTTGGACATTAGTCTGGAGATCCTGCGTGTGCACAAGTTT ATTAGGAAATACTACCTGAAAGAGACACAAAAGGCAGAAGTGCTTGCCAGGGCTATTCTCGGCATTTACCGCTATCGTGC AGTTAGAGAAGCTTTCAAATATTTCTCATCCCACTACAAAACTTTACTTTCTTTTAACCTAGCTGAAGCTCTTCCGCGGG GAGATATGATCTTGGAAACCCTGTCAAATAGCTTAACAAATTTGACTGTTGCTTCTTCTAAACGTAGCTCTCCTCGGAAT GTTGATACAAAAAAACAACTGGTAGTGTCTCCAGCATCAGCTGTGGCACTCTTCCGTCTTGGATTCAAATCAGATAAGTT TGCTGATATTTATGAAGAAACAACTGTTGTTGGTGACATCCGAGTTGGTGAAATAAACCTCTTGGAAATGGCAGTCAAAA AGTCCCTTCGGGACACTGGAAAAGCAGAAGCTGCCCAGGCAACTGTGGACCAAGTGAAGGTTGAAGGCATCGATACGAAT GTTGCAGTAATGAAGGAACTACTATTCCCGGTCATCGAATCTGCTAACCGACTAGAGCGTTTAGCCTCATGGAAAGACTT TTACAAATCAACAGCCTTTTTGCTACTCACTAGTTATATGATTTTAAGGGGGTGGATCCATTACTTATTGCCATCCATAT TTGTGGTTGTTGCAATTCTCATGCTTTGGCGGAGGCATTTCAGAAAGGGAAGATCATTAGAAGCCTTCATAGTAACGCCT CCCCCAAATCGAAATCCAGTAGAACAACTGCTAACATTGCAAGAGGCTATCACACAGTTTGAATCACTTATTCAAGCTGG AAATATTGTTCTCCTAAAAGTAAGAGCTCTTCTACTTGCTCTATTACCACAGGCTACGGAGAAGGTTGCACTATTACTGG TATTCATAGCTGCAGTGTTTGCTTTTGTTCCTCCAAAATACATAATTTTTGTGATATTCTTTGAGTATTACACAAGGGAG ATGCCATGTAGGAAAGAATCAAGTGATAGATGGGTAAGGAGGATGAGAGAATGGTGGATCAGAATACCAGCTGCTCCAGT CGAGCTCATTAAGCCTGACGAGTGCAAGAAAAGAAAATGA
Protein sequence (LotjaGi5g1v0355400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MMLAWETPSVHTDETPPPSSKDEHGGDDDEASLFYSSSTNMAVQVDDQKTVGLEAFSRIAPVCAPIADVITVHNLFDALT SSSGRRLHFLVYDKYIRFLDKVIKNSKNVLASSVGSLQLAEEEIVLDVDGTIPTQPVLQHIGISAWPGRLTLTNYALYFE SLGVGVHEKPVRYDLGTDLKQVIKPDLTGPLGARLFDKAVMYKSTSVAEPVYFEFPEFKANVRRDYWLDISLEILRVHKF IRKYYLKETQKAEVLARAILGIYRYRAVREAFKYFSSHYKTLLSFNLAEALPRGDMILETLSNSLTNLTVASSKRSSPRN VDTKKQLVVSPASAVALFRLGFKSDKFADIYEETTVVGDIRVGEINLLEMAVKKSLRDTGKAEAAQATVDQVKVEGIDTN VAVMKELLFPVIESANRLERLASWKDFYKSTAFLLLTSYMILRGWIHYLLPSIFVVVAILMLWRRHFRKGRSLEAFIVTP PPNRNPVEQLLTLQEAITQFESLIQAGNIVLLKVRALLLALLPQATEKVALLLVFIAAVFAFVPPKYIIFVIFFEYYTRE MPCRKESSDRWVRRMREWWIRIPAAPVELIKPDECKKRK
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 597 | 597 | 0.0 | – | |
| MobiDBLite | 1 | 31 | 31 | - | – | |
| Phobius | 1 | 444 | 444 | - | – | |
| PANTHER | 1 | 597 | 597 | 0.0 | – | |
| MobiDBLite | 16 | 30 | 15 | - | – | |
| Pfam | 365 | 590 | 226 | 1.8E-68 | ||
| TMHMM | 441 | 463 | 23 | - | – | |
| Phobius | 445 | 463 | 19 | - | – | |
| Phobius | 464 | 502 | 39 | - | – | |
| Phobius | 503 | 523 | 21 | - | – | |
| Phobius | 524 | 528 | 5 | - | – | |
| Phobius | 529 | 554 | 26 | - | – | |
| TMHMM | 529 | 551 | 23 | - | – | |
| Phobius | 555 | 599 | 45 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi5g1v0355400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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