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| Field | Value |
|---|---|
| Gene ID | LotjaGi5g1v0362700 |
| Transcript ID | LotjaGi5g1v0362700.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Transmembrane protein; TAIR: AT4G10430.1 TMPIT-like protein; Swiss-Prot: sp|Q54IK2|TM120_DICDI Transmembrane protein 120 homolog; TrEMBL-Plants: tr|C6TE84|C6TE84_SOYBN Putative uncharacterized protein; Found in the gene: LotjaGi5g1v0362700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr5:67697398..67706486) extracted from Lotus japonicus Gifu genome v1.2.
GTGAAATCGCAAGCAATGGAAGAAACAAGTAGTGCAGAGATTGAGAAGATAGATGAATCAGTGTCGAGCGTGTTGGAAGA AGCGAAAGAGCTTCAGGAATCAGTTTCCAATCACATCTCGAAGACGCTAAGCGATGAGCAACCACTTCGCCAACGTGCCC TCGCTCTCGACTCCAAAATCCACTCTCTTCGTTCTTCCCTCGATTCTCTGCTCCACAACAAGCTCATCAACCCTTCCGTA GCGGATAAGGTCCTTCTTCTCTTTCTCTCTTTTCCCTTTCAATCAATCAATAGTATTATACTTATACCCTTCCTTCCTTT TAACTGGATCGGCACCGCATGTTTGTTTGTTTCAGTTGGATGAGGATTTGCAGCGAGCACGCTGCATCGTCGTTGATGGC GATGCTTCTTCACTCCTTCCTGGCCATGCTCAAGGTTCGATTATTATTATTATTATTATTATATTATTATTATTATTATT ATTATTATTATTTTTATTTATTTAACCCTCCTCCCTAGTCCCTACCCATTATTGTTATTAATGTATGTATGTATGTCAAT TCATTCATTCAATCAATTTTAGGAAGTTTTTTGAGGATGTTTCTTGGCCCTATTAATGTGCGTGCCTCTAGGAAGGATGT TCAGCTTAAGGTCAAAGAGGAATACAACAGTTACAGGGTAATCAATATATCACATGCTTTGCTTTTTAGAATCAGTTATA CAATCATGCAATGCAATTGAAAATGAATCTTGTTTTCTTCAGGATAGAACTGCCCTGCTCTTCCTGCTATTTCCATCAAT ACTGCTTATTCTAAGATCTTGGCTTTGGGATGGATGCTTGCCAGCTTTTCCTGTCCAGATTTACCAGGTTTTTATTTCTC TAAAACCCCTCTTTATTTCATGTCATATTAATATTTGTCTGCAATCTTTCATTGAGTGTTGTCCTTTGTCAGGCCTGGCT GCTATTTCTTTACACTGGTTTGGCATTGCGAGAGAACATATTGAGAGTCAATGGAAGTGATATCCGACCATGGTACGGTC ATTAAACTTTGTTTTATGGAGGCTCTGTGAATTGTGACCGTTTCCCCCCTTTTTTAATGATGCTCATGAAACAAAAATTA ACTAATCACTGTTAGTTAACTCACGGATTAGGTTATTGGTTCTGTGCTCAGTAGTTCCTCCTAGATGGCAGAAAAATACT GTGTAGCTTAATTTATTGATTGTTCTGCCCTTCAAATTCTAAAACCTGATTTTCCCTTTGGAGGATATTAGGAGACATTG TCTGATCAGTTGGGATGTGCCTGTAATGTACAAGTCTATCATAGGGGAGTATTAAGCTTGAGGAGCATTGTGTCGATAAA CATTTCCCTAGTGAGTAGTGACATAGTCGTTGTGATCCAGAGCTAATATGGGTTCATTAGCATAGATGTGGATGTTAACT CGTAATTTTCGGTTTTCTGCTACTCAATTGAGTCAGTGTGTGGAAGTTTATTGCTCTGCTCTCTTAATCTTTGCCTTCTT TGCATTCTTTGAAAGGGGCTATGGTTCTGTTCTTTTACTTTGGTTGGGGATTCTATTTTGGTTCTTTGCCCTTGCGTCTA TCGAGTGCTTACCTTGCATGGTGATAGGTGCACATGCTTTTCAATTTCATCACTCCATATATTGGAGTTTCCACTTTTTT TGGAACATAAGCAACCTTGAGACCTCAGTCCTCAGACATTCTCATTCCTTTTATTATTTTAATTCTTCTCACTCCTGCTT TGGTATTTTTGACCCTTCAGAATCTTTTGCCTGTTTCCTCTTTTCTTTATTTGATTACTTTCTTATATTGAAACCTTCAT ACAAAATATCCTGATGCTGCAGTTTCATTAGCATGACTGAAGCAACCACTAGTTGATGCCTTTCTTTGGATTGTGATACT TACTATATTTTTAATGCAATTATTTGATACATGTCTGCAGGCATGAGAAGGGCCTTTCCATTGAATTTTGAGTCGCTCTG TACTTATTAAAGCTCTTGTATTGTATGAAGGGCTATCTGTTTTTTCTTTTTTTGCATTGTCAAGTGGCTTGGAAATACTA GAGTAAGTTGTTTGGACTGTTTGTAGAGCACATAACTATCAATCCATGTTGTGGGATAGTGGTTAGCCCACTCTTTTGAG TTTTTATTTAAAGAGGAAATCTTCTGTGTCTTAATAATCTCTTTTGTAATCTAAAAAGAGAATTATTATCAACACCCCCT TGTCCTGTCGTAGATTGAGAACAATGAAGGGAAGGCAGCAATTTTATTTAGTTGGCCTGCTACATTTCATCCTTGCAAAG TGTGTTGGGATTTGTTTATGTTTACATGGGACAATCTTTTGGCAAAAAAACTCACTGTAAGGTTACAGGTGGATATATCA CCATTACTGTGCTATGTTAATGGCCCTTGTGAGTCTCACTTGGGAAATTAAAGGACAACCAGATTGTGCGAAAAAGCAGG TTTGTTTCCTTGTTCTGTGCATTAGTTTTCTCTTCCTTTTTTAACAATGTTATGTATTTATCATGTGTCTCAATAATGCA TGCAGAGAGGCGTACAACTTTTCCTACAGTGGGCTATGATGCAGGGAGTTGCAATGCTTTTGCAAAATAGATATCAACGC CAAAGACTTTATACTCGTATTGCATTGGGAAAGGTGCCACTGTTAAATAGAATTTATACTTGCTTTACACTCACATGCTT TTTCTATGAGCCTTTTACTCACTATTCGGTGATATGTTAGTGTAGACTGTAGTCATAATTTTACAATTTTCCCTATGGCA TTAATTTTACAGTTAACTCTCAAAGTGTAATGGACTGAATAGATATACTGTTTAATCCTTGTTTTTCTCTGAATTTCAGG CTAAAAGGATGGATGTTGTATGGGGTGAAACAGCTGGTGTCGATGGCCAACTGTGGTTGTTGTGTCCCGTACTTTTCATA TTGCAGGTAACTACATGACTAAGAATAGTGCATGTTACATAAGTTTGTAGGTGTGAGTGTGTGTTAGGTACCAGAAAATA TGAAGGAAACTGGAACTGAAATTGTATTGATTATACTGAATTTCTGGTATGAAACCCAGAAATTGTGTTAGAGAATACAA GAAACAAAGGAAAATAAACAGAGCAATTCGAGAGTGCTCTTCTCTCCAAATCCTAAGCCCAAAAACAAGCCTACCTCATT CTCTCACCATAACTAACATATATTCCTCTCACTCCCTAGTGGTCCCCCCCCCTAGCTGTACTACTCATCAATACTAATAA TAACACCTCATCAGGTGGTTATTTAGGAATCCTAACATTCTAGAAGGCCTTGTCATTTGACAGAATGCCAGTGGACTTGG GCTTCCTATTGTAGACTTTGCCAAACCTGGGCCTGGCCATAGCAGGTGCAACATCTCTCCCCCCTTGAAGATTCACCTTG TCCTCAAGGTGATGGTCTGGAAATTGTGCTATCAATCTGTCCAATTCTTCCCAGGAATCTTCAAAAGCTGGCAGATTCTT CCATCTCACTAGAACTTCTGTGGTTCCAAGGTCATTCTGTCTGGCATCCAAGATGGTTTCAGGTTCTACTTGAAGCTCCC ACCCTTCATTTAGATATTTGGGCAATGGTTGGCTGACGATCCCCTCCTTCACTACTTTTTTGAGCAAAGAAATGTGGAAT ACTGGATGAACTTGGCTGTCCTCTGGTAATTGAAGCTTGTAAGCAGCAGCATTGATCTTCTCTATTATAGGATAAGGGCC ATAGTATCTAGGGCTCAACTTTTGATTCTTCCTCCTGGCCAAACTCTTGAGTTTGTAGGGTTGAATCTTGAGATACACAA GATCCCCTACCTCAAATTGAATGTCTCTTCTATGTTTATTTGCTTGCTGTCTCATTCTGTTTTGAGCCTTCTCTAAATTT TCCTTGAGTTCATCTAGCATAAGGTTCCTTTCAGCAGTAAGCTTCTCCACTTCCTCTACTGAAGTGACAGAATCAGTTCC CCTGATGATAGCAGGAGGGTCTCTCCCATATAAGGCCTTGAAGGGAGTGGTTTTGATGGCAGAATGATAGTTGGTATTAT ACCAAAATTCTGCCCAAGACAACCATCTTGGCCATTGGTTAGGTCTTGTTCCTGTCACACACCTGAGATAGGTTTCAACA CACCTATTTACTACCTCGGTCTGCCCATCTGTTTGAGGATGGTAGGCAGAGCTAAATTTCAGTTTGGTTCCAGCCAATCT AAAGAGTTCAGTCCAGAAAGTGCTAAGAAAAACTCTGTCTCTGTCAGAAACTATGGTATTGGGAAACCCATGTAGCTTTA CTACCTCCTTTATGAATATTTCAGCCACTTCCTTAGCATTATAGGGGTGTGAGAGAGCTATGAAATGGGCATATTTGGTG AACCTGTCAACCACCACAAAGATGGTGTCCTTCCCCATTGCCTTAGGAAGGCCCCCTATGAAATCCATAGAAATATCAGA CCACACTTGTGATGGTATAGGAAGAGGTAGTAACAAACCTGCTGGATTCAATGCTTCATATTTGTTTCTCTGGCAAACCT CACAATCTTGCACAAATTTCTGAATGTCCATCTTCATCCCTTCCCAGTAAAATAGAGCTGAGATTCTCTTATAAGTTCTA AAGACCCCTGCATGGCCTCCAAGAGCAGACTCATGGTATTCTTTGAGTATGGTGAGAACCTTGCTGGACTCCTTTGGTAA CACTATTCTGATAAAATAGTCTTCCCTTCCTTAATTGATACCCTGCTAGAGATTGCCCTTGTGTCAATAGCTCTTGCATG ATTTTTTTACATTTTTCATCAGCCAATAACTCTTCTTCTAAGTCATTCCAGCCTTCACACTGAATAGATGAGATGGCAGA AAATTGCATTTTTCTGGACAAGGCATCTGCTGCTTTGTTTTCTACTCCAGGTTTGTACCTGATTTCAAAATCATAACCCA TCAATTTGGAAACCCATTTTTGCTGATCTTCACCCATCAATCTCTGGTCAGCTAAGAACTTTAAGCTCTTTTGATCTGTG TGGATTAGGAACTTGCTACCAAGTAAATAATGCCTCCATTTCTGGATTGCGAAAACCACAGCCATTAATTCTCTTTCATA TACTGATTTTTCCTGAGCTCTGTCAGATAAAGTCTTGCTCATGAATGCAATTGGTCTCCCTTCTTGCATCAAAACAGCTC CAAGCCCCTTTCCTGATGCATCAGTCTCAAGCACAAATTCCTTGCTGAAATCTGGTGCTGCCAACACAGGAACAGTAGTC ATTACCTCCTTTAATTTGGCAAAAGCTAGACTGGCTTCCTCATTCCATTCAAAGTTGTTTTTCTTGAGGAGATGGTTTAG AGGTTGAGCTAACTTGCTGTAATTCCTCACAAACCTTCTATAATACCCTGTCAAACCCAAGAAACCCCTTAACCCTTTCA CTTCTTTGGGTTGAGGCCAATTCAGCATGTCATTGATTTTAGAGGGATCAGCAGCTACTCCTTGCTTGGAGATTACTTGG CCTAAATAGACCAATTCTGGTTGGCCAAATGAACATTTCTTTTTATTAGCTACTAAGTGATTTTCCTGCAAGCTTTGGAG CACCAACCTCAAATGTTCCATGTGCAATTCTAAACTCTTGCTATAGATTAGTATATCATCAAAGAAAACCAAAACAAACT TCCTTAAATGAGGTTTCAAAACCTGATTCATGAGGGCCTGAAAGGTTGAAGGAGCATTAGATAACCCAAAAGGCATTACT AGATATTCATAATGTCCTTCATGAGTTCTAAAAGCTGTTTTATGAATATCCTCCTCTTTCATCCTTATTTGATGATAACC AGATTTTAAGTCCAATTTAGAAAAGATAACAGCAGAACCTATCTCATCTAATAATTCATCGATTATAGGTATAGGGAACT TATCTGGTATAGTAACCTTGTTCAAGGCTCTATAGTCAACACAGAAACGCCACCCTCCATCTTTTTTCTTCACTAGAATT GCAGGGCTACTGAATGGACTAATGCTGGGCCTTATAATCCCATTCTTGAGCATGTCCTGCACTTGAGTTTCTATCTCATT TTTCTGGTAGAATGGATACCTATAGGGCCTTATGTTTGGTGCTGCTGCTCCTTGCTGCAGTATAATAGCATGATCAGTAG GCCTCTTAGGAGGCAGCCCATGAGGTTCTTGAAACACCACAGGGAATTTTTCAATAACGGTTCTCAATTCAGCAGGGACC TCAGCTACTGCTATGTTGATACCTTTTACAAACTCATGAGAAAGGCAGAAATCCAGGTCTTTGTTCTTCCTTGTGCTCTT TATGTTTTTGCAAGCTTCCTGAATTTTATTACCCTGCGGTTCTCCATGTAACACAAACTGCTTGCCCTGAAGGTTCCACT TAATAATAAGTTCTTTGAAGTTGGCCTCAATGTCCCCAAGGCTGGCTAACCAATCCATTCCCAGGACTAAATCAGTGCCC CCAAGCCCAAGGATAAAGAAATGTTGAGTGATAGGGATTCCTTGCACTACCAGTGACAAATTCTTGCACACTCCTGAATT TCTCTCTCTGGCCCCATTTCCAACTTCCACCACATATTCAGTGGTTGCTACAACAGCCAAGTCTAGTTCATTCACAATAT TTTGTGAGATAAAATTGCTGGTTGCTCCACAATCTACCAGAATCCAGATTTCCCTTGTTCCAAGTCTTCCTCTAACTTTG AAAGACCTGTTAGATGTTAAGCCCTCTTTACTATTAAGAGACAATTGCAGTATTTTGCCCTCCAAAACAAACTCACCATC TTCAGCTTCTTCAAATATGTCTTCCTCTTCTTCCTCTTCATCTCCCTCAATGAGAATGAATTGGAAATGTTTCTTAGCAC ACACATGTTCTCTTCCCCACTTCTCACCACATTTAAAACACAATCCTCTTCTACTTCTCTCTTGCAACTCATTTTGAGAG AGTCTTTGTCCCCCTTGCCACTTCTTCTCAGGGTTCTTAGTTTCATTCCCTCCATCGTCCTGGGTCTCTTTTGGTTTGGT TTCCTGTCCAGTATTGTTCTTCCCCTGATGACTGGAATTATAATTTATGTGCTTTCCCCCATAACTTGAAGATTTGCTTC CAAACCCACCCTTATCCTTCCACCCACGTTTGTCCTCATCCTTTCCTTTTTCTCCTCTGAGAGCAGAATTTTTTTCCTCA ATCAACAAGGCCCTATCCATCAATCCTGCAAGATCAGCAGCAGGGTACAATTTCATTTCAGCTTTGATTTCCTCCTGCAA TCCATTAAGGAACACTCCTTTCAGGATCTCCCTATCAGCACCTCTCATGGGTGCTGCTGCCTCTTCAAAGCTTTCCCTGT AGGCCATGACACTCCCTTTTTGCTTAATGCTAAGCAAAGGGCCAAAAGGGTTCTGAACCAAGGTGGGTTGAAATCTCCTT ATCAAGGCTTGCTTGAAAGGTTCCCAGGTTCTCTCCACAGCTTGCTCTTCCCACCATTGAAACCATCCCAGTGCTTTCCC TTCCATGGCAATCATCACCATCTCCAACCTCTCCTCCTCCCCTACACGACTGAGTTGGAAGAACCGTTCAACACGACTAA TCCACCCATAAGCATCGCTTCCATCAAACATGGGGATGTCGACCCTTCTTCCAGTCACAGCACGCAAATGGACGCGATGG GGGTGATCGAATCGCTCCCTGCTGTGGTCTGAGGTACGCGACCCGGTTCGTGACCCGGTTCGCGACCCGGAGTGCGAAGA CGAAGCGTCGCGATCTCGCTCTCTGTCTCGCGATGGTCGCCGGTTTCTGGGTGTGTTCGATCTTCCTCGCGTGCGCCTCC GTTCCCGATTCATGATGAGTCGCCGGAGCTCCTCAAATTGCTCCGTGGCCATCTCCTTCATCGTGGTAACAGATCGCTCA AGGTCATCAACTCTGGACTCCATTGCAGCTCGCGTAACCACCATAAAAGCTCCCTCAGGATCGGGAGCTCTGATACCAAT GTTAGGTACCAGAAAATATGAAGGAAACTGGAACTGAAATTGTATTGATTATACTGAATTTCTGGTATGAAACCCAGAAA TTGTGTTAGAGAATACAAGAAACAAAGGAAAATAAACAGAGCAATTCGAGAGTGCTCTTCTCTCCAAATCCTAAGCCCAA AAACAAGCCTACCTCATTCTCTCACCATAACTAACATATATTCCTCTCACTCCCTAGTGGTCCCCCCCCCTAGCTGTACT ACTCATCAATACTAATAATAACACCTCATCAGGTGGTTATTTAGGAATCCTAACATTCTAGAAGGCCTTGTCATTTGACA GAATGCCAGTGGACTTGGGCTTCCTATTGTAGACTTTGCCAAACCTGGGCCTGGCCATAGCAGGTGCAACAGTGTGACTA TGAAGTGTTTCTTTTCCTCATGTGATATTCATGTTCCTACAATATTCACGATCTGTCATTCAAAACTTCAAATGTTTCGC ATATTTGTTGCGTCAGGTGACAGGTGATTGATTTAGAAGCAAATCTTGTGTTAACATGGGACTGTTTTTCACTTATCCAC TGTCTGGTTTGCTGGCAAAAAGTGTGTTCACTTCATATACTTAGTTTCAAATTTATCGTCCTGGCATTGAATGTTGTTTA GTGTTAATTTGAGTTAAAACAAATCGTCTGCTTTATTCTCATTTTGGAAATCATTGACCTGAACATAGAAGAGGTTGGAC AATCATGATGTACATTTGTGCTCTCATCTTGTTTCAGGGATTCGAAGCATATATCGGACTATTATTGCTCCGGACCGCAT TTGTTGGCGTTATTTCTGAGTGGCAGGTACTTCTAGTTTGCTTTTACTTGCTATTTTATTTCACTTTGCACATCAAATGA GTAGAACAGAAGAAAATGAATCCAGTGATATTTTGCTGCAAATATTAGCCTTATAATGATGGTAACCCTTTTGGCAGGTC ATATTTTGTGGTGTCCTGTTGGTCCTAATGGCTATTGGGAACTTTGCAAATACTGTACAGACTCTGTTAGCAAAGTCTAG ATTTAAGGCAAAGATGAGAAAAAGCAAGAGCAAGCAGAGACTGAATTAG
CDS sequence (LotjaGi5g1v0362700.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAGAAACAAGTAGTGCAGAGATTGAGAAGATAGATGAATCAGTGTCGAGCGTGTTGGAAGAAGCGAAAGAGCTTCA GGAATCAGTTTCCAATCACATCTCGAAGACGCTAAGCGATGAGCAACCACTTCGCCAACGTGCCCTCGCTCTCGACTCCA AAATCCACTCTCTTCGTTCTTCCCTCGATTCTCTGCTCCACAACAAGCTCATCAACCCTTCCGTAGCGGATAAGTTGGAT GAGGATTTGCAGCGAGCACGCTGCATCGTCGTTGATGGCGATGCTTCTTCACTCCTTCCTGGCCATGCTCAAGGAAGTTT TTTGAGGATGTTTCTTGGCCCTATTAATGTGCGTGCCTCTAGGAAGGATGTTCAGCTTAAGGTCAAAGAGGAATACAACA GTTACAGGGATAGAACTGCCCTGCTCTTCCTGCTATTTCCATCAATACTGCTTATTCTAAGATCTTGGCTTTGGGATGGA TGCTTGCCAGCTTTTCCTGTCCAGATTTACCAGGCCTGGCTGCTATTTCTTTACACTGGTTTGGCATTGCGAGAGAACAT ATTGAGAGTCAATGGAAGTGATATCCGACCATGGCATGAGAAGGGCCTTTCCATTGAAGTGGATATATCACCATTACTGT GCTATGTTAATGGCCCTTGTGAGTCTCACTTGGGAAATTAA
Protein sequence (LotjaGi5g1v0362700.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEETSSAEIEKIDESVSSVLEEAKELQESVSNHISKTLSDEQPLRQRALALDSKIHSLRSSLDSLLHNKLINPSVADKLD EDLQRARCIVVDGDASSLLPGHAQGSFLRMFLGPINVRASRKDVQLKVKEEYNSYRDRTALLFLLFPSILLILRSWLWDG CLPAFPVQIYQAWLLFLYTGLALRENILRVNGSDIRPWHEKGLSIEVDISPLLCYVNGPCESHLGN
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 138 | 138 | - | – | |
| Pfam | 8 | 199 | 192 | 4.3E-41 | ||
| Coils | 9 | 29 | 21 | - | – | |
| PANTHER | 12 | 199 | 188 | 5.8E-78 | – | |
| PANTHER | 12 | 199 | 188 | 5.8E-78 | ||
| TMHMM | 139 | 158 | 20 | - | – | |
| Phobius | 139 | 158 | 20 | - | – | |
| Phobius | 159 | 163 | 5 | - | – | |
| Phobius | 164 | 183 | 20 | - | – | |
| TMHMM | 169 | 188 | 20 | - | – | |
| Phobius | 184 | 226 | 43 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Cellular component | Integral component of membrane | The component of a membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane. |
Expression pattern of LotjaGi5g1v0362700.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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