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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0012400 |
| Transcript ID | LotjaGi6g1v0012400.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | IQ domain-containing protein; TAIR: AT1G14380.1 IQ-domain 28; Swiss-Prot: sp|Q8L4D8|IQD31_ARATH Protein IQ-DOMAIN 31; TrEMBL-Plants: tr|I1J5M2|I1J5M2_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0012400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:2311214..2315198) extracted from Lotus japonicus Gifu genome v1.2.
CTACCAAATCATACCCTCTGCTTCTCTACTCTCTCTCGCTCACTCTCTTCTCGACGGCGCGCACCTCCATCGTTAGGGTT CCTCACCACCGTGCTTCCATCATCAAACCACACCTTCCTTCTGCTCTGCTTCGTTTTCACCTCACCGTGCTTCAATCAAT CAAACCACACCTTCCTTCTGCTGCTTCGTCTTCACCATCGCTTCCATCACTCAAGCTCGTGTGGGTTCTGCTTCTTCTTC ACCGAGCCCGTCCGCTCCAGCGCGACTGCATCCCACGGCGCGCCGCACCTTCCGCTGCCATTATCAAGGTTTGGTTTGTA ACCGATATTTTTCCTGCAATTTTCCATCTTCTGTGCTATGTTTTTTCTTTTAATTGCTATGGAAGCCTCTGATTTTTTCT GAACACTGCAATTTTCTCTTTTTATGAATGGTATGTGGAGGAGGAATTCTGGTTTTGTTCCATTGCTGGTGTTGTTACAG GATGGTTTGGTCACGTTTTTATGGGCGTTCCAAAGTTTGTAAGGCCATAAGTTTTATTGGATTTTACCATAATTTCTTTT AGATTTAACTTCAAATAGACAGTTTGTTGCTAGATTAACTAATCTATTTTTTGTTTTGTTTTTGGTTTTTTAGCTTCAAA CTGACAGTATTGGGTTTGATTCCTATTGGGTTAATGCAGTACGGGGACACTTCCCTTTGGAATTCTAGGGCTTCCTGTTC ACTCTTTTGACTTCTAGTTTTTGTTCTTGTTCTTGTCTGTCCCTATTGGAAATTAGGTAGTGAGTAGTGGGGTATGGTTT TGGTTTTTGAGTCTTCAACTCTTTTATGGTATTTTTCTCTGCATGACTTGCCCACATGATGTCCATTATTTTACTTGAGA ATGAATATATGTTGGGCTGTTACTTTATGGGTTTTCTTAAATTAAGTTTTATGTTCGGTTGTTTAATTTAGTTTAACTTC TAATTAGCTTGTAATTTGAGGGTCAATTGTATATTCTTTTTTTTGCAGATTTTGATGCTTGAGTTTTGTGCTTTCCAAAA CATTGATCTTTGCTGTTATGGGGAAAGGACGAAGTCCTGGGAAATGGTTCAAGAACTTACTTTTGGGGAAGAAGAAATCA TCATCAAAGTCTAATTCATCAAAGAATGATGATATTTTTGTAAGTTTTTTCATGTTTAGTACCTATTTGTGTTAATGATT TGTTAAAGGCTGAGATAATATCAATGCTGTTGCCTTTAGGTTGTGAGCACTTAGACAAGTTGTAACTTTTTTTGTTTTAA TTTATTGATGTACATAGAAACCTTCAAGTAACAAGGATGTGCTGGGGTCTTCTGAGGTGTCTGTGTCGGCTCAAACTGTG GATTCTTTGATCATATCCGCACCTCTATCTGGAACTAATGCTACTCAAGGAGTGGTTTCAGAAAAGGAAATAGTTAGCAG GCCATCGAATGACAGGGATGTTCTTTCAAATGGAGATAAAGAGGCTCATGCTCAGCCTATTGCTAATGTGGAAACTATCG AGAAACTCCAGCTTACAGAAGCAGCTATAAAACTTCAGGCTGCCTGCAGAGGCTATCAGGTAATTACTCCCTGATACAAT TCTGCTATACCAGCTGATATAACTTGGTTATAATTATTTGGAAGACATCATTGGCATTCCATATATCAATGCACTGGAAA TGTTAATAGATACCGATGTGTTATACAACCACAGTTATCTTACTTTCAATGTTTTAAATATTCAGTAATAGAATAGAATG AAAATGTGGGTATTTCGTTTACTGTTATAGCTTTAATCTGTCCAGTTTATGCATTTTTGTTTGAAATCATATTGTATCAT TATTTATTTGATCAAGAATTGCTGTACCCATTGATTCTCAGTGTGTAAGCTATCACATGCAAACTTCCTAAGCATTGGTT ATTTATGAGGAAGTTTCTCTATATATAATTAATAAACGCTTAAAGTGATTCTTGCTGTTTTTCATTGAAGGCTCGTCGAG CATTTCAAACACTCAGAGCTATCACACAACTGCAAGCTCTTATCCGTGGCCACCTGGTTAGAAGGCAAGCTGTTTCTGCA TTATATTGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGCTCGCGGTTACAATGTTAGGCGTTCTGATGTTGGGCTTGC AGTCCTGAAAATTCGAAAGGTAAAAGTAATTAGATTAATTCAGCAAGTACAATGATCTGGGCATTATTCTTAATGTTTTG GCCTTCTTAATGATCTGGATAAAATAAAGTACCCTATAATAAATCATGTTTTGGCCTTCTTAATGTTTTGGCCCTATAGG AAAACTATGCTCCATATTCTATCATCTTTTCTACAATAGTTGCTACCCCAACTCAGCTTTAATAAATTTATTGTTAATCC AATCTTATCTTGTGTGCGCACATATCCATGACAACACTCTCATCTTTTTAGCATTAATTTTACTTCTTGTTGGTTGTTTG CTGCCCAATATTCGATCTGGTAAACCATCACTTCACTTGTCTTATAACTATGGTAATATTTTTCTTCTTAGCTTGATTGA GTAAGGCTCATAGAGATAAGAAGAAGCCAAGGTGGCTTGGAGATCATGTATGGAATGGGCTATGTGAGCATTGGGAAACT CCGAAGTTCAAGGAGAAAAGTGTCAAAGCAAAGGCAAATCGGGCATCTGATCGTGAAGGATTTAGAGGGACCCTTCACAT TGGTGGCTCTATCACAACATCTCAACATAGAGACAATTTGGTTAAGATTCTTCTCTTGTAGTGTATTCTCTTAATTTAGA TATAAATGATATTGTCCTAATTTTTTGGTACTTGTTTTAGATGAAGAAAAATGGATTCAACCCTTCTCCACTAGACTTGT TTCGCTCTACACATCAACGCAAGGATGGTACATTTGTGGACAAGAAATCAGAGCATGTAGATGTATGATATGCTAAACTC TTCTTTAATTTAGTATACATGAATTGCATTGGACTGGTCTATAGGACAAATATTTATGGATTGGTTGGGCTCTTGTGACA TTTTTAGTGTTTTTGTCTTTGTTTCTCATACAAGGTTGTGCTTGAAATTATGGTAAATGTAGGTTAGGTATTGTAAAAGA GAATTCATGGTTGATTTTATTGTAATTAATTCTTGCTAACAGGGTGCATATGTGCGTGAAATGGAAGATAGGACGCAAAG AGCATCTGAGCAAAATCTTCCTCCGCCAAATGAGCTAGATGTGTGGCGTGATGTGGCTGGCATGAAAAAGGGTAGAATAT ATGGGTTGGGATTGGAGTCCACTGTTATCAATAAACAATATCATGGCTCATGTTCTTCATCATCTGAATGGGTAAGAAGA TCAGAATTTGATCAATTGAGAAACACTATTATGGAGGAGACTCAAAGAATGGTAAAACAAATGATGGAAGAAAGGATGCA ACAACCACCAATGCCAACCCCAAATCAAGAGGAGTTAGAAACTGATGAGTCAGAGAATGAGGAGGATCTTGGTGCTTTTC CATGAAAACTTTGTCAAGCTTTGTTTCTATATTTAATGTAATAGACTATGTTTAATGTAATAGTAATCTACTAGACTAGT TTAAGTAGTTCATGGTATACTTTTTGTGATGATTCAGTGATGAATTTAGGTGGATATGTTAAGATTGTGTGTTTTGTGAT GATTCAATGTTGATTATGGTTATATTCATATTTTTAACACTAAAAAAATCTGTCACAAAACTGATTATTTTTGTTAATTT TATATTTATTACCGTCACTGAACTCATCGCTAACTTTTTAAATCTGTCGCTAATTCCGTCGCTATATTATAGCTGAAACC GTCGCTAATTCCGTCGCTAAATTGCTAAATTCCGTCGCTAATGCAGTCGCTAAATTCTGTCGCTAATTCCGTCGCTAAAT TCCGTCACTACATCGGTTGCTACAAGTCCGTCGCTAAATCGGTCGCTAAATCGGTCGCAACATTT
CDS sequence (LotjaGi6g1v0012400.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGGAAAGGACGAAGTCCTGGGAAATGGTTCAAGAACTTACTTTTGGGGAAGAAGAAATCATCATCAAAGTCTAATTC ATCAAAGAATGATGATATTTTTAAACCTTCAAGTAACAAGGATGTGCTGGGGTCTTCTGAGGTGTCTGTGTCGGCTCAAA CTGTGGATTCTTTGATCATATCCGCACCTCTATCTGGAACTAATGCTACTCAAGGAGTGGTTTCAGAAAAGGAAATAGTT AGCAGGCCATCGAATGACAGGGATGTTCTTTCAAATGGAGATAAAGAGGCTCATGCTCAGCCTATTGCTAATGTGGAAAC TATCGAGAAACTCCAGCTTACAGAAGCAGCTATAAAACTTCAGGCTGCCTGCAGAGGCTATCAGGCTCGTCGAGCATTTC AAACACTCAGAGCTATCACACAACTGCAAGCTCTTATCCGTGGCCACCTGGTTAGAAGGCAAGCTGTTTCTGCATTATAT TGTGTGAAAGGAATTGTTAAATTTCAAGCATTGGCTCGCGGTTACAATGTTAGGCGTTCTGATGTTGGGCTTGCAGTCCT GAAAATTCGAAAGCTTGATTGA
Protein sequence (LotjaGi6g1v0012400.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGKGRSPGKWFKNLLLGKKKSSSKSNSSKNDDIFKPSSNKDVLGSSEVSVSAQTVDSLIISAPLSGTNATQGVVSEKEIV SRPSNDRDVLSNGDKEAHAQPIANVETIEKLQLTEAAIKLQAACRGYQARRAFQTLRAITQLQALIRGHLVRRQAVSALY CVKGIVKFQALARGYNVRRSDVGLAVLKIRKLD
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 45 | 45 | - | – | |
| PANTHER | 1 | 185 | 185 | 7.3E-83 | – | |
| PANTHER | 1 | 185 | 185 | 7.3E-83 | – | |
| MobiDBLite | 18 | 45 | 28 | - | – | |
| SUPERFAMILY | 111 | 155 | 45 | 2.1E-5 | ||
| Gene3D | 112 | 156 | 45 | 3.6E-9 | – | |
| SMART | 112 | 134 | 23 | 4.3E-6 | ||
| ProSiteProfiles | 113 | 141 | 29 | 10.512 | ||
| Pfam | 114 | 134 | 21 | 4.9E-7 | ||
| SMART | 135 | 156 | 22 | 6.0 | ||
| ProSiteProfiles | 137 | 164 | 28 | 8.48 | ||
| Pfam | 137 | 154 | 18 | 2.8E-4 | ||
| SMART | 160 | 182 | 23 | 410.0 | ||
| Pfam | 163 | 179 | 17 | 0.019 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0012400.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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