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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0014700 |
| Transcript ID | LotjaGi6g1v0014700.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Ankyrin repeat domain-containing protein 13B; TAIR: AT1G04780.1 Ankyrin repeat family protein; Swiss-Prot: sp|Q5F259|AN13B_MOUSE Ankyrin repeat domain-containing protein 13B; TrEMBL-Plants: tr|I1NEG9|I1NEG9_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0014700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:2639910..2644744) extracted from Lotus japonicus Gifu genome v1.2.
ATGGCGGGGATTGATGTTACGAGGTTTGCTCATAGCCCTGTGCACAAGGCCATAATTTTGAAGGATTATGTTGAACTTAG GAGGATACTCGCGGGCCTTCCTAAACTGTGTAATGTGAATGAGGTTCGCACCGAAGCGGTTTCTATTCAAGAGGAAGAGA AGGCTGATGCCATCTCTGCTGTGATTGATCGGCGAGATGTGCCGAACCGCGACACCCCTCTTCACTTGGCTGTGAAATTG AGGGATGAAGGGGCCACCGAGATGCTAATGGTTGCTGGGGCAGATTGGAGTTTACAGAATGAACAGGGTTGGAGTGCTCT TCAGGAAGCTATTTGCAATAGAGAAGAGGGTATTGCCAAGATAATAATTAAGCATTATCAGCCTCTGGCTTGGGCAAAAT GGTGCAGGAGATTGCCTCGCTTGGTAGCGACTATGCGAAGGATGAGAGACTTCTATATGGAGATTACGTTCCATTTCGAG AGTTCTGTAATTCCTTTCATCTCAAGGATTGCACCTTCAGACACCTACAAAATTTGGAAAAGGGGTGCCAATCTAAGGGC TGACATGACTTTGGCTGGCTTTGATGGTTTTAGAATTCAAAGATCGGATCAGAGCGTTCTTTTTCTAGGTGATGGTTCAG AGGATGGGAGAGTTCAGCCTGGGTCACTCTGCATGATCTCACACAAAGAAAAGGAGATACTGAATGCTCTAGATGACGCT GGCTTTGCAGCAAATGATGAAGAGGTTCAAAATGAAGTGGCTGCCATGTCTAAAACAAATATATTTAGGCCTGGGATTGA CGTTACTGAGGCAGTTCTTTTGCCTCAGTTGACTTGGAGGCGACAGGAGAGAACAGAAATGGTAGGGCCTTGGAGAGCTA AGGTGTATGATATGCACAACGTAGTTGTAAGCATAAAATCTAGAGGAGTTCCTGGAGCTATGACAGATGATGAGTTCTTC TCATCTTGCAATGGAAATGAAACAGAAAGTGAGGAACTTAATGATATTTTGACTGAGGATGAAAGGAGGCAATTGGAAGA TGCACTTAAGTTGGATTCTTCAGAATCGAACAACGAGAGTGATGAGATGATCATTGGGCATCGTCACGGTTCTTATGAAC ATAGGGATATTCCTATTGAAGACGGAAATTGTAGCAAAAGTGGAGAGAATAAGCAGGAAAAGAAAGGATGGTTTGGTGGA TGGAGAAAAAAGGACTCTAAACAGGAAGCACCAAAGAAGATTTCTCCACCTAGAAGTTCTCTCTGTGTAGATGAAAAGGT CAGTGATTTATTGGGGGATTCTCCTTCAAAAAGTCTGAGTAAGCCAGGAAGACATTCTGTTGACATAGTTGTGAGGGGTG ATGAGCAGCGGAGGAAGAAAGATGCCAAAGCTTCTTCTGCGAATTCTGACAGTAGAAGTCATCACAAGGATGGAAGTCGC GAAAATGAATATAAAAAAGGGTTGAGGCCTATTCTTTGGCTTTCCCCAAGCTTTCCTTTAAAAACTGAGGAACTCTTGCC ATTGCTTGACATCGTTGCTAACAAAGTTAAAGCAATTCGTCGATTAAGAGAACTCCTTACGACAAAACTTCCAACGGGGA CTTTTCCTGTTAAGGTATGTGCTTATCATCTTCAATTTAAGACCTATTACTACAAATATGAATACTCTGGGCATGTGTTA AATTCTCAATTGTTTCCATATTGTTTTCTTTTTGTGTGAGTCGCCAGGATAAATTATGTGCTTGCTTGTTTACTCTGCTT ATGCTGCAATGTGCATATTCTGTGTTGACCTGTAGATGTGGAAATTGTAGTGAAAAGGAATGAGGAAAAATTGGGTGAGG GATCACTATAAGTTCCTAATACATTATTCCACACAGCTAATTGTCTTAATGTTTGTATTCCATACTTTATGACTCCTTTG TCATTACCTAAAGTTAGATATTATGCTTCATTTTAACTATACTAAAAAGAAAGTTGGAAACAGAAAAGCAATTATAAACA TAGAAGAAATGTTCAAATATTAAAAGGAAATGAAGAATCTCCTGAAATCTATATAGTCAACTCAACTGTATTGTGTGATC GATTTATATCTGGTTCCTTCTTTGGTCAACCAAGATGTTGTTGGTGTCATGAACCAATAATCCCAAAAGCTGAAGTTGTT CGGTAAAGGACACATGGATGGTTATATTTCTAACACGCCCCCTCATGCAAGAGTTCACTTGGGATTGAAGTGTGGACAAT GCATAGGTGCACCTACCATGTGCTGAAATTCAACTTTTTTTAAGAAGAATCGGGGGCGACAATGATTGAACTCTAGACCA CTTAGTCATAGAGGCTCTGATACTATGTCATGAACCAATTATCCCAAAAGCTTAAGTTGTTGGGTAAAGGGCCCATGAAT GATTATATTTCTAACAGTTGGGGGGTTGGGGGGGGGGGATTATCAAATTAGGATTTGAATGCAAACAAACGATTGCTGTT TCCTGTTCGTGGTGCTTAGCTTATAACTACTTTCACAAGATTTGTTTGTTTCTTTTGTATTCTGGGTAACAGGAAAATCA TATTTTGACTTAATTCCAGGCTTTCCAGTGCACACATATCTTCGTAGTACATTAATGGAATGTCTGTCTGATCTGCAGAG AGATTTGAGGGTGTCATTGTTTAAATACTTGTTATTTTGCTGAGGCAATCTTTTGTCTTGCTGATTTACTCTTGCTTTGA AGGATGCCTTATCTTATATGCTCGATGTTTTTGTCTTTCTTTTTGATCTTCCTAAGGTAACTTCTTTATTAAAAAAAAAG TAGAGTACTTTGTCACCTAAAAAATCATGACATTTGTATTACTCTTCCTTAGTTTCTTTTTCACAGATAGCAATGTCAAT AAGAGCACTAGCAACGATTAAAGTTTCTATCATATAATAATAATAATAATAATAATAATAATAATAATAATAATAAATCT TATTTTGAAAACTGTTTCAAAATTTTTTTTTTCCATTATTGATTAAATTTTTTATTTTATTTTATTGTCCTCCTGGGTAT AATCCTGAAACCCTGCTAGAGTACTAGCAGAATAGTTATGCCTTTGCCTTAGTTCCATTGTACAATCTATATGGTCGTGT CTATGGTTGTGTCACTTTCTTCTACATATAATTTTTTATTTATGATCTTTAACTGTGTGATAGGTACTAATATCTGGTTT TGGAAGGGTATTTGGGGTGTGGAATCTGTCAATCTAAAGTGTTTTTCCCCTGTCTTTATCGTATGGAAAGCTTAGCCTTT GGACTCTTAATAGGGTGTTTTATTGTAAGTCCTATCTGGAAGTCCTAAGCTTCTTAAATATCAAGTCCTTTGTTTTGACT ACCATACTTATAGGATTAACGCTGTGCTAGTGTTACTGTCTTTTGGAACAATTTGCTCTCGTTTTTTTTGTGGGCACTGC GTTTGCCCCACTTGGAGGCAATTTCAGATGATCAGATACCTGATTTAAAGTATGTACTAAGTGCAAGGAAACTGAAGTTG TATAATGATGTGTAGTTTATGCTGTTAATGCTTGCTTGCATATACTGTCTATCTTGCCTTTATGGTTAGATATTTGTTTA TGGCCATATTTAGTGTTGTGCAAAGAATAATGCTTTATGGCCTGAAATTATGATGCATGAAGGGTCTCAACTAGTACCTG GCATTGTATTTACCACATTCATATGACCAGTGTGTCACGCGATTGGTTGTTACTTTTTTTCATCATAAAACACTTCCTAC CATTTAGCACTACTGGTTTTGCAAATTATAGTTCAAGAAGGTTGTCATTTCAAGCATGCATAGAGATTAGGGACCTTTGC TGTTTAGGTTTTGGAGGATTGATTTTATCCTTTTAGCTGTACTCTCCATCCTTTTTCCATTACTATAGAAATAAATACTA GAGTTGACAATCTCAAACTTCCTTTATCTCAATGATCAGAGAATTTGTTGGAAATTATTGTTCAGGTCCTTTAAACATCA TGAATTTGACCCATTGTGGCTGGAAACATGTTCCCCACCATCGAGAATTTGTTATGCAACTATTGTTATTCTTCACATTC ATCTTTGCAGGTAGGTCCTTCCATCCTTTGAGCTAGCCAGGTCTGTGTTTTGCATAAGTTCATGTGATCAATCTTGGTAT GTAGTTTCTTGAATCACTGGGTGAAGCCATAAAACAATAAATGCTGAAGTGGTGTGTGCACTGTGCAGCTGTCTTGGTGG CCTATATGTGGATAATTCGTTTGTTTTAAGCATTCTTTAGATGTGGAGTTAATTTTTGTCAATTATGTAGAATTCATTTG AAGGCTTTTTTCTTTGGACTGAAACCTTGTCTTAGATGGTTCGTTATTGTATTTTGGGTTAAATACGTTTTTCGTCTCCG TTGGTGTTCATATTAAAATTATTTGTTTTAAGTTCCTACAAAATACAAAAATCATGTGGTTTAAACCCATTAATTACCCT TTTGCATATTCAGGTTGCCATCCCTGTGGTTCCCACCATCAGAGTATTAGTTACTTTTACAAAGTTTGAAGAACTACAGC CATTGGATGAATTTGCCACGCCACCATCAAGTCCGTCTGCTACAGGCCTAGAGAGCCCTGCAGCAACACAAACCTCAGCT TCATCTTGGTTTCAGTGGATAAAGGCGCCTTACCGCCCTAGCTCATCTACTGCAGCTTCCAGCAGCAGCAGGATAGAAAA TATTGAAGACCCGTTTGCAATTCCCTCGGACTATACCTGGGTTACTGCTGAAGCAAAGAAAAAGAAGATGCAAGAAAAGA ACAAATCAAAGAAAGGGAAAAGCCATAACCAATGA
CDS sequence (LotjaGi6g1v0014700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGGGGATTGATGTTACGAGGTTTGCTCATAGCCCTGTGCACAAGGCCATAATTTTGAAGGATTATGTTGAACTTAG GAGGATACTCGCGGGCCTTCCTAAACTGTGTAATGTGAATGAGGTTCGCACCGAAGCGGTTTCTATTCAAGAGGAAGAGA AGGCTGATGCCATCTCTGCTGTGATTGATCGGCGAGATGTGCCGAACCGCGACACCCCTCTTCACTTGGCTGTGAAATTG AGGGATGAAGGGGCCACCGAGATGCTAATGGTTGCTGGGGCAGATTGGAGTTTACAGAATGAACAGGGTTGGAGTGCTCT TCAGGAAGCTATTTGCAATAGAGAAGAGGGTATTGCCAAGATAATAATTAAGCATTATCAGCCTCTGGCTTGGGCAAAAT GGTGCAGGAGATTGCCTCGCTTGGTAGCGACTATGCGAAGGATGAGAGACTTCTATATGGAGATTACGTTCCATTTCGAG AGTTCTGTAATTCCTTTCATCTCAAGGATTGCACCTTCAGACACCTACAAAATTTGGAAAAGGGGTGCCAATCTAAGGGC TGACATGACTTTGGCTGGCTTTGATGGTTTTAGAATTCAAAGATCGGATCAGAGCGTTCTTTTTCTAGGTGATGGTTCAG AGGATGGGAGAGTTCAGCCTGGGTCACTCTGCATGATCTCACACAAAGAAAAGGAGATACTGAATGCTCTAGATGACGCT GGCTTTGCAGCAAATGATGAAGAGGTTCAAAATGAAGTGGCTGCCATGTCTAAAACAAATATATTTAGGCCTGGGATTGA CGTTACTGAGGCAGTTCTTTTGCCTCAGTTGACTTGGAGGCGACAGGAGAGAACAGAAATGGTAGGGCCTTGGAGAGCTA AGGTGTATGATATGCACAACGTAGTTGTAAGCATAAAATCTAGAGGAGTTCCTGGAGCTATGACAGATGATGAGTTCTTC TCATCTTGCAATGGAAATGAAACAGAAAGTGAGGAACTTAATGATATTTTGACTGAGGATGAAAGGAGGCAATTGGAAGA TGCACTTAAGTTGGATTCTTCAGAATCGAACAACGAGAGTGATGAGATGATCATTGGGCATCGTCACGGTTCTTATGAAC ATAGGGATATTCCTATTGAAGACGGAAATTGTAGCAAAAGTGGAGAGAATAAGCAGGAAAAGAAAGGATGGTTTGGTGGA TGGAGAAAAAAGGACTCTAAACAGGAAGCACCAAAGAAGATTTCTCCACCTAGAAGTTCTCTCTGTGTAGATGAAAAGGT CAGTGATTTATTGGGGGATTCTCCTTCAAAAAGTCTGAGTAAGCCAGGAAGACATTCTGTTGACATAGTTGTGAGGGGTG ATGAGCAGCGGAGGAAGAAAGATGCCAAAGCTTCTTCTGCGAATTCTGACAGTAGAAGTCATCACAAGGATGGAAGTCGC GAAAATGAATATAAAAAAGGGTTGAGGCCTATTCTTTGGCTTTCCCCAAGCTTTCCTTTAAAAACTGAGGAACTCTTGCC ATTGCTTGACATCGTTGCTAACAAAGTTAAAGCAATTCGTCGATTAAGAGAACTCCTTACGACAAAACTTCCAACGGGGA CTTTTCCTGTTAAGGTTGCCATCCCTGTGGTTCCCACCATCAGAGTATTAGTTACTTTTACAAAGTTTGAAGAACTACAG CCATTGGATGAATTTGCCACGCCACCATCAAGTCCGTCTGCTACAGGCCTAGAGAGCCCTGCAGCAACACAAACCTCAGC TTCATCTTGGTTTCAGTGGATAAAGGCGCCTTACCGCCCTAGCTCATCTACTGCAGCTTCCAGCAGCAGCAGGATAGAAA ATATTGAAGACCCGTTTGCAATTCCCTCGGACTATACCTGGGTTACTGCTGAAGCAAAGAAAAAGAAGATGCAAGAAAAG AACAAATCAAAGAAAGGGAAAAGCCATAACCAATGA
Protein sequence (LotjaGi6g1v0014700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAGIDVTRFAHSPVHKAIILKDYVELRRILAGLPKLCNVNEVRTEAVSIQEEEKADAISAVIDRRDVPNRDTPLHLAVKL RDEGATEMLMVAGADWSLQNEQGWSALQEAICNREEGIAKIIIKHYQPLAWAKWCRRLPRLVATMRRMRDFYMEITFHFE SSVIPFISRIAPSDTYKIWKRGANLRADMTLAGFDGFRIQRSDQSVLFLGDGSEDGRVQPGSLCMISHKEKEILNALDDA GFAANDEEVQNEVAAMSKTNIFRPGIDVTEAVLLPQLTWRRQERTEMVGPWRAKVYDMHNVVVSIKSRGVPGAMTDDEFF SSCNGNETESEELNDILTEDERRQLEDALKLDSSESNNESDEMIIGHRHGSYEHRDIPIEDGNCSKSGENKQEKKGWFGG WRKKDSKQEAPKKISPPRSSLCVDEKVSDLLGDSPSKSLSKPGRHSVDIVVRGDEQRRKKDAKASSANSDSRSHHKDGSR ENEYKKGLRPILWLSPSFPLKTEELLPLLDIVANKVKAIRRLRELLTTKLPTGTFPVKVAIPVVPTIRVLVTFTKFEELQ PLDEFATPPSSPSATGLESPAATQTSASSWFQWIKAPYRPSSSTAASSSSRIENIEDPFAIPSDYTWVTAEAKKKKMQEK NKSKKGKSHNQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 651 | 651 | 0.0 | ||
| PANTHER | 1 | 651 | 651 | 0.0 | – | |
| Gene3D | 27 | 152 | 126 | 1.0E-10 | ||
| SUPERFAMILY | 69 | 143 | 75 | 4.15E-10 | ||
| ProSiteProfiles | 69 | 125 | 57 | 13.39 | ||
| ProSiteProfiles | 69 | 101 | 33 | 10.205 | ||
| SMART | 69 | 98 | 30 | 11.0 | ||
| SMART | 102 | 131 | 30 | 190.0 | ||
| Pfam | 186 | 626 | 441 | 7.5E-101 | ||
| MobiDBLite | 368 | 412 | 45 | - | – | |
| MobiDBLite | 368 | 483 | 116 | - | – | |
| MobiDBLite | 447 | 483 | 37 | - | – | |
| MobiDBLite | 632 | 651 | 20 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0014700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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