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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0015500 |
| Transcript ID | LotjaGi6g1v0015500.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Uricase; TAIR: AT2G26230.1 uricase / urate oxidase / nodulin 35; Swiss-Prot: sp|P34798|URIC1_CANLI Uricase-2 isozyme 1; TrEMBL-Plants: tr|Q9FRY6|Q9FRY6_LOTJA Uricase; Found in the gene: LotjaGi6g1v0015500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:2739358..2744953) extracted from Lotus japonicus Gifu genome v1.2.
ATTATTGATAAATGTCAAATTATAACGGATAAAAAAGTGAATGTCGAGATAAAAAATTGTGTTAGATAGAGACTGTTTTC TCGTACCTATAAATACAACAGAAGAAAGAGAGAGAAAGAAGGAAGAAGAAGAAAGCATCAGCATAAGCATCGATGGCGAA GGAAGTAGAAGGGTTCAAGTTCGAGCAGAGACACGGGAAAGAGAGAGTGAGAGTTGCTCGCGTTTGGAAGAACAATCAAG GTCACCACTTCGTTGTGGAGTGGCGCGTCAGCATCTCCCTCCTCTCCGATTGCCTCAACTCCTATCTCCGTGATGATAAC TCTGACATCGTTGCCACTGACACCATGAAAAACACTGTAACCACCACCTTCTTTCAACTTGTGCCTATGTTTTCAATTTG TGTGTGAAGCTGTGAATGTTGTAATTGGTGTTTATTTGATTCATGTTTGTTTTTTCTGAATTTTGCTAGATCAATCTGAT TTTGATTTTTTTTTAAAATATTTTTCCTGTTTGTTTACTGAGGAATTTAAAAAAGAGACTAAGAGAGGCTACTATATGCA ACTTCAGCTTGATTACAACTTGGAATTTTTTCTGATTTTATTCAGAGAATTTGAATCTGGCTGATTCTTGATGTGAAAAA TTAAATTTTGGTATTTGGGTTTGTGAAGTTTTGCCATTTTGATTCTCTGGGATCTTTAACAGGACTGAATAACATGATGG ACAGTGATTTGATTTCTTCTGGTTTTGTAGTTTTCTGGTCTGAATCTTTTATTTGATCTAGGATTTTAAGTGTTTGCTCC TCACTTTAGCTCTTTAGAGGAATTTAAGGTTTAATCATGCACTCAAGTTTAAATTCTATTTTCTTGTTCTGGGATGTTTA TGTGAAAATGAATTTATACAGAAGAGGAAATGCTGTGTGTTTGTGCAAATATTTCATTTACTGCCACATCAATTTCATCT GTTTTTATTTATCAATTATCTGTTCACTTCAGTTTTGAATTTTCATTTCAGGTATATGCAAAAGCAAAGGAATGTTCGGA AATACTTTCTGTGGAGGACTTTGCTATTCTACTTGCTAAACACTTCACATCATTTTACAAGCAGGTTGGTGACCGAAAAT TTAATATCAATTTTGAAATTATATGTTCTTTTCTGCTCATTTTGTTTTTGTTCCTCTATGTTGCACTGTACTTTTTCTTT GTATTTTTTCTGATAAGTATTCTGCTTTGACCTATCTTGTATCTCAAATTATTGATATCCTTCTCATATTTTCTTTTACT GTCATATTTTGTAGGTTACTACTGCTATTGTTAAAATTGTGGAGAAACCATGGGAGCGTGTTAATGTGGATGGTCAACCT CATGAACATGGTTAGTCAAACTATTATATACACTGCAATATGTCTTGCTTCATATGGTGTTCGTATATATTGCACTCTCG AGGTTCTTTGTTAGCTTTCTTATTTGATTTTTTGTTCCAGCTGAAGTATCTTTATTCAATTTTAGTTATAAAATTTGAAA TATTTTGGGGAAAGTTTTAGTTACTATTGTTCTGTCCAAATTCAAATGCGTTTCACATCTTGAATTAAGGTATTTTTTAT ATGTTTTGCATTGATTCGAGTTAATTGTTCTATAATTTTTTCTTCAGTTAAGCATCTCTGTTTGAAAAAACCCATATTTG TTTGATTGGGAGTTAGTGTGGTGATCTGACCTCATTGTTGATGCCATTTTCCCCACTTTCATGCTCTTTTTCTACACTAA TACTGAATCCAGCGTTGGTTTTTTTTGTGTAAGGGTTCAAGCTCGGATCCGAGAAGCATACAGCAGAGGCTATAGTGCAA AAGTCTGGTGCACTACAGTTGACTTCTGGTATTGAAGGATTGTCATTACTGAAGACAACCAAGGTAAGCTTGCTATATAG AAACTTGTGTTTTGATTTTCATGCAGTGTTTCTAGTTTCTGTTATACAGAATTTCTCATCACAAGATGCAGTTGCTATTG CAAGTGCTTTCAAATGATATAATGCTGAGTGTCTTAACTATGTGGGTACAGTATTTGATATTGTAACTAACAATATATCG TCATTATAAACACAGAAAACGGTTAAGAAGTGACGTGATATATTTTAATCTGAAAAGAAATGCATTAAAAAATGTTTATT TGGCTTCCTCCTCCTGTGCCAAACCTCTTGATATGAAATTTTTTAAGATGGTTGACAGTATAGCTTTTTAAGCATTACGT CATGTTCATGAGCGCATAGATTCATAACATACATTTATTAAAGATCTGGTTTCTGGAGTGGAATATGCTTCCATGCTCTT CTAAATGACTTAGTTTTTTATCGACTATAAGATAGGAGTACTCACTTGAGTCTTATTCTGCGCTTCATCCTCTCCCCATG AAGAAATACAAGTTACTAATTGATATTAATCTCAATATTATTTCTCATATTTCAAGACTATTACAGTTCTATAGAGTTTG CTTCATGCCAAGAAAGCGCAAGCTGATTTTTTATTTTTTTTTATTTTATGTGACTGATGAGCAGTCTGGTTTTGAGGGTT TTATAAGAGACAAGTACACAGTACTTCCTGAAACACGTGAAAGGATGCTGGCGACAGAAGTAACTGCACTATGGAGGTAA TTTCCATTTTCCATACTTTTTTTTGTCTTGCATTGCAAGTTTTAGTAATCTAAAAGTGAGAACTATGTTGGCTTACTGTA ACCCACATCCAAGAGGCATATTGTTTAAAACAAACCCTTCACTCATACAGAAACTGGTGCTGTAGGGTGAATTATAAGAA ACTTCATTATAACGTCTAGAAAATTTTTTTGTCATTCATTAACAAGAAGATGAAAGAATTCATGTCATACATCATCATCT GGGAAAAGACTTGAAGCTTAAGAAGTTTTTCCACTAATCATTGCATGGTTGTTCTCTTTAACCTGGAAAATGGAAAGTCT GATAGAGTGACAGTTAGAAAGTTAGTTAGTTAATAGGGGATTAGTTGCAGTGGCAATAAATAAAAGGGAGAGGGGAATAG GAGGGTATTGCTGGTTCTCTCGAACAACCAGTTATTGTAGTTCATTGCTATTGGTGAATAATAATCAGTTTTATTCTCAC TCACTGCTGGTACCTACCAAAGTGACACTTCTAAATTTAATATGGCTGTAGGTATTCATATGAATCACTATATAGCATCC CGCAGAAGCCGCTTTATTTTACTGAGAAGTACCTCGATGTTAAAAAAGTTATAGTTGACACTTTCTTTGGACATCCAAAG GAGGGAGTGTATAGTCCATCTGTTCAAAGCACTCTCTACCAGATGGCGAAGGCCACACTAAACAGGTTTCTCTCTGTCCC TCCCTCTTTGTGTATGTAAATCTATCTGCCTCTCTATCTTTTCTGCATCCACTGCTACATTTGGTTGTTTCCTAAATGTG ACCAATTTAATGCATTCATTAAAATTATCTAGCAAGTGATAAGTAACTTTTATGCTTCAGATTTCCTGACGTAGCTTCTA TACAACTAAAGATGCCAAATATTCATTTCATACCAGTCAATCTCTCAAACAAGGACGGTCCAATTGTAAAGGTATTGATT CTTTTCCCTGAGATGCTTGCGGAGGTTGTTAGATTTAAACTTAGCGCCCATTAAGAATTCTTAACTGATTATATTGCTAT TGACACCGTCCTATAAGGAGAAAATATTGAGAAACCATCGTTGAGGATCAAAACTGACATTATAGTTTGGTCTTGAATGA TATTAGCATAAAAATTTGGGTTTGCATTTCAGTCATGGCTTTATTTGCAGCTGTAGAATACTTCCATCTCAGATATTTTG CAACAGAGTTTCATCTCACCTTTTGACCATGACTTGTGTGAATGTGGAAAAGATATACACCCACATGTCTTATACTAACT TTCTATTATTTTAAAGACTTCAATTCCCTCACTTGAAATGGGTTTGGTTTGGAGAATGAAAGTGTTGTCTTAAGTTGTGC TGCTTATGGGCAAAGTTGTATAGATATGAATAAATGTCAATTATGATCCCTCAAAATGTCTAATGATAAATCTGATTGAA CCCATTTCCTACTTACTTTCCTTTCCTGCCCAAATATATTAGTTTTGACTTGTCTTCACCCGAGTCACCATTTGACTCTC CTTACTAAGAAAATATAGGTTCTTTGTTCATTACACCAATCACTGAGTCACCTATATTTGTTATAAATAATTAGATTATT CTAAATATCTTAAAGCTGGTAAATGATACTAATGCTTGAGCAGTTTGATGACGATGTGTATTTGCCAACGGACGAGCCAC ATGGGTCAATTGAAGCTAGCTTGAGCCGCATTTTGTCAAAGATGTAGAAACACTACTTAAACATCTCAGCCCATCCCTTC TGGTCAAATGGAGATGCTGCTTACACTATGGTGCTTATCCTGATTTAAGATCATACACAAATGGAATCTTGCCAGAGCGA TACTCCTTTCAAATAAAGAACTCAATAATGTTAATTCTGGTTTGTTTTCATTATATTTTGTTCATGGAGAGCTTATGTGC ATAAATAATCAGCATGGTGGATTTTCTGCAATTTGCACCAATGTATATCAGAACTGTTTATTCACTGAGAAGTTTGGCAA GACGACTAGTTTCAGCATTTATAATCGAACTTTTCATTCGTTGAATCAACTAGTGTTTTATAAATTTACATCTCCAATGG TTAAACTCTATAAACTTAACATGCCATTAGCTGTTAGTTTCACTTAACACTTGTGCTTTTAGCTAGTTCGATAGGAAGAC TAACAACTACGACTCAAACTATAACATGTACATGTACATATATGAGCTGAAAATTACAAGTTACAAACAATGACTTCTAC TTAATACAAATTATTCAAATATCTACTTGAAACTTTTCAACAAGTGCCTCTTCATAATTTCATTGTTTGACTATCATCTA ATCTCAATCTTCAATCAACCTTTAATTTTGATGGTAAAATTTGACTAAAAGACCAAAACTCGAGAAATCCATTTGACGGG TGTGGACTTCATGAACTCTAACTCCTTGAAATGGTTTCTTTAAAATGAAATTCAAAATAACACTCTAGTCTTTACACTAG CTTTTGAGCAAAGCCTTAGTGTGTGTTTGGATTAGCGTTAGCAGAATTGGATCTGATCAGAATTGGATCTGGTCAAAATT GGATCTGAAAACGTGAGTTCAAGTGACGTGATTTATGTTTGGATACACATACCCAGAATTGATTTTTGTATCAGAATTTC GTTTGGACAACTTTGATTAGATTTGATTTTGATTATGTAATGACCAAAATGGGTATATGACTATTTATTCATTATATATT GCATCATTTTTAAAACTTTATATTCATATAAATTTATTTACAATTGTGACACCATAATCATTTGTGTCAACAATTATGTT CTCATATTCATACCGATTGAAAACAATATCCATTTCAGCTCTCATAATAAAGTTGTGTATAGTCATTGTTGCACAAACTA ATTGAACTTACGTTTTAATTTTGAACTTAGGCATCTTCCGTTTCAATTTGTGTCACCATAATCATTTGTGTCAACA
CDS sequence (LotjaGi6g1v0015500.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCGAAGGAAGTAGAAGGGTTCAAGTTCGAGCAGAGACACGGGAAAGAGAGAGTGAGAGTTGCTCGCGTTTGGAAGAA CAATCAAGGTCACCACTTCGTTGTGGAGTGGCGCGTCAGCATCTCCCTCCTCTCCGATTGCCTCAACTCCTATCTCCGTG ATGATAACTCTGACATCGTTGCCACTGACACCATGAAAAACACTGTATATGCAAAAGCAAAGGAATGTTCGGAAATACTT TCTGTGGAGGACTTTGCTATTCTACTTGCTAAACACTTCACATCATTTTACAAGCAGGTTACTACTGCTATTGTTAAAAT TGTGGAGAAACCATGGGAGCGTGTTAATGTGGATGGTCAACCTCATGAACATGGGTTCAAGCTCGGATCCGAGAAGCATA CAGCAGAGGCTATAGTGCAAAAGTCTGGTGCACTACAGTTGACTTCTGGTATTGAAGGATTGTCATTACTGAAGACAACC AAGTCTGGTTTTGAGGGTTTTATAAGAGACAAGTACACAGTACTTCCTGAAACACGTGAAAGGATGCTGGCGACAGAAGT AACTGCACTATGGAGGTATTCATATGAATCACTATATAGCATCCCGCAGAAGCCGCTTTATTTTACTGAGAAGTACCTCG ATGTTAAAAAAGTTATAGTTGACACTTTCTTTGGACATCCAAAGGAGGGAGTGTATAGTCCATCTGTTCAAAGCACTCTC TACCAGATGGCGAAGGCCACACTAAACAGATTTCCTGACGTAGCTTCTATACAACTAAAGATGCCAAATATTCATTTCAT ACCAGTCAATCTCTCAAACAAGGACGGTCCAATTGTAAAGTTTGATGACGATGTGTATTTGCCAACGGACGAGCCACATG GGTCAATTGAAGCTAGCTTGAGCCGCATTTTGTCAAAGATGTAG
Protein sequence (LotjaGi6g1v0015500.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAKEVEGFKFEQRHGKERVRVARVWKNNQGHHFVVEWRVSISLLSDCLNSYLRDDNSDIVATDTMKNTVYAKAKECSEIL SVEDFAILLAKHFTSFYKQVTTAIVKIVEKPWERVNVDGQPHEHGFKLGSEKHTAEAIVQKSGALQLTSGIEGLSLLKTT KSGFEGFIRDKYTVLPETRERMLATEVTALWRYSYESLYSIPQKPLYFTEKYLDVKKVIVDTFFGHPKEGVYSPSVQSTL YQMAKATLNRFPDVASIQLKMPNIHFIPVNLSNKDGPIVKFDDDVYLPTDEPHGSIEASLSRILSKM
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PIRSF | 1 | 307 | 307 | 1.1E-102 | ||
| Gene3D | 2 | 307 | 306 | 1.2E-107 | – | |
| PANTHER | 5 | 307 | 303 | 1.9E-148 | – | |
| PANTHER | 5 | 307 | 303 | 1.9E-148 | – | |
| SUPERFAMILY | 10 | 132 | 123 | 9.78E-45 | – | |
| TIGRFAM | 11 | 302 | 292 | 1.3E-104 | ||
| Pfam | 13 | 136 | 124 | 1.7E-30 | ||
| CDD | 13 | 302 | 290 | 6.58837E-159 | – | |
| PRINTS | 15 | 26 | 12 | 7.1E-35 | ||
| PRINTS | 55 | 69 | 15 | 7.1E-35 | ||
| PRINTS | 92 | 105 | 14 | 7.1E-35 | ||
| SUPERFAMILY | 143 | 302 | 160 | 5.0E-54 | – | |
| Pfam | 148 | 297 | 150 | 6.3E-27 | ||
| PRINTS | 154 | 170 | 17 | 7.1E-35 | ||
| ProSitePatterns | 154 | 181 | 28 | - | ||
| PRINTS | 170 | 182 | 13 | 7.1E-35 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Urate oxidase activity | Catalysis of the reaction: urate + O2 + H2O = 5-hydroxyisourate + hydrogen peroxide. | ||
| Biological process | Purine nucleobase metabolic process | The chemical reactions and pathways involving purine nucleobases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, which include adenine and guanine. | ||
| Biological process | Oxidation-reduction process | A metabolic process that results in the removal or addition of one or more electrons to or from a substance, with or without the concomitant removal or addition of a proton or protons. |
Expression pattern of LotjaGi6g1v0015500.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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