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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0018700 |
| Transcript ID | LotjaGi6g1v0018700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Pterin-4-alpha-carbinolamine dehydratase; TAIR: AT5G51110.1 Transcriptional coactivator/pterin dehydratase; Swiss-Prot: sp|B0JQV0|PHS_MICAN Putative pterin-4-alpha-carbinolamine dehydratase; TrEMBL-Plants: tr|I3SZ80|I3SZ80_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0018700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:3396221..3399407) extracted from Lotus japonicus Gifu genome v1.2.
AATTAGAATTTTGTTTAACCACCATACCATATCATGTTATGCAGTACTTACTACCCTCATCATCTCCACTAGAAATTCCA TTTTCATTTCCACCCAATCCAACAAAGAATACAACACCAACCAACCAACCAAGCAAACATAGATAGATAGATGGCCACAC TCAACATTGCGTTCCCTCTGGTGCACCCTATCTTCCTCACCCAACGCAACCCATCACCCCATTCTATCACCCTCACCTCA AAATCACTCCGCAGCACCAGCACCATCGTTCGCGTTGATGCCAACGATTTCTTGGGTGACTTTGGTGCCAGAGACCCTTT CCCAGCTGAGATTGAGAGCCAGTTCGGAGACAAAGTGCTCGGAAACAACGACACTGAGCACAAAATCCTCATCCCCAACA TCGCTGCTCTTTCTCTTTCCCAGCAGAACTGCACTCCCGTTTCCCCTCTTCAGCACCCAATTTCAGAAGATGATGCCTCC AAGCTCCTAAGAAAGGTCACTATTCAATTCATCACTAACCTCTTTCTCTCTTTCTCAATACAGTGTGTGCTGAACTGCTT ATACTTTGTTACTGATATTTAAAAGGACACATCATGTTTTCATTAGAAGAATTAAACATAAATGGTCAACTTTGTGTTTA ATAATATTGACTAGAGATATGACTAATTAATTCCTTATATAGGGTAGAGCAATCATCATCTCTGAGCTAGCTTAGCTTTT GAGGTAGAGTTAGGCCCAACCCATATTCGAAGACTTCCTGTGAGTTGCGAAACCCCAACTCCATATGTATATAAAAAGCT TGCAGAAGGTGTTGGAAGAAACTTTAGTCTCTGCCCATGAGCCTATTATGATAAAATTTTACATCAATTAGTGATGCTGT TGAGAGCATGAGAGTGTTTAGTTCTGTGGCTGGAAGCTCAATAAAGTCACAAAGGGTGAATTCCGAGCGTGCTGTGTTTT GGATTGTGTGTGTGAGTGTATGGTTTGTGATGGACCGTTTAGCCCGTAAAACTGTAGATTGTTTATTTGTCTTTCATATT CTGTAAACAAGTTATAGGACTTGTTCACAGAAACACAGAAAATATTGACAGGAGGTGAGGTGATGTGGTGGTACTCTGGT ATAATGCCATGCATTTTTTGAGTAACTCAGGTTTTAATTTCTTCCCATATTTGTACTGCTTTTGTATAAATTACATGCAT GTTGAAACTTGAAATATAATTCTATAGGAGGTTAAAACCAATAGGTTTTTAGTTTCAGCTGGTAAGGATCAAAGAACTTT GGCTTATGAGGCTTAGGTTCAATTCTTTCAGCAATCCCCTTGGCAAATGATATGTAAGTACCCTTGTAACTTGTAAGCCC TTGCCAAGACTATGAACTTGGAATGAAGCAGCCTCCTTCATCTTAAACTTTATTTTGAGTATGAAGAGAAAGCTGGTGAT AAGGATCAAAGAGTTGCTACTTTGTCAAAAGAGGTTTGACTACCATGAAGATGTATAAATCATGTTATGCCCTTCTTAAG AGTATATATACATCATACTGATACAGATTACATGAGTAAAGGTTATATGAAGCACTTAGGGATTTGAATTTCTGGGGTTG TGATCAAATCTGTGAATGTGATATTTGAATGCTGCTCCTAATCTGGTTAATATAATACGTGTCAACAAAACCAATGGGCC AACCAACCAATTTTGTGCTGCTTTATTCTGAAACATTTATCAATACAAGAAATATGGAAAGAAGAACCATTTAGCTGGGC TTTTGTAGGCACGATGTATGTTAATTTTCTGCATTTCATGTTTTAACTATGATTTTTTGTTTTGTTTTTGCAGTACATTT TGTTTTGTTTATTAACTTGAAATGCTACGTTTTTTACTTTTTCCAAATGACGCAAATTTGACAGAAGTCAATTTTACCTT TTACAACTCCTTAAACCGGTTTTTTCTTCCTTTGTGCAGGTTGTGGGTTGGAGATTAGTGCATGAGGAAAGTGGACTGAA GCTTCAATGTTTGTGGAAATTGAGAGATTTTAAATCTGGAGTTGAACTCATCAATAGGATCTCTAAGGTTGTAGAGGCTG AAGGCCATTTCCCAAATATCCACTTAGAACAACCAAATCAAATCAGAGCAGTACTATGGACAGCTTCTATTGGTAAGAAA CCATAAACTAATACCTTCTTTTGTACCTCATTCTATTTCATTGGAGATTTTGATTTTAGTTGCATCCGATTAAAATTCCA ATTTTTTAGTTAGCATTTATTGTAGTTATGGGTTGCTAGTTGCCTAGTTCCCAGTATAGGGTTTAAAACTCTCTTATTGA ACAATCCTATATCATTTCCTCTCTTCCCCCTTCTATGGGACTATGGCCTTTGATGGAGTTTCTTTAGGCACTACACTTAC AATTGTACAGGGACAGAACTAGATACTTGAAAAGTGGGGCAGTCAACCTCCTAAGAGAAAAAAATTCTTATTAAATAGGA TTCAAATGTTGTGTTTTACTCTCTCAATTTTTGTAGTGCTTATTCTAATTTGAAATTATTAGTTTTGCTTAATGTATTAA ATTTTCATCCCCTTATTCATATATATATTTTTTGGTTCGTCACTTTTGTGGCAGTGTTTCTAGTAGGGTCTGGTACTCCC ATCTTACTACATGACATTTGAAAGTGTTTTAAATTTTGCAGGAGGATTAAGTATGAATGATTTCGTTGTAGCAGCAAAGA TAGGTGAAATAAAGACATCTGATCTTGCCCCAAAGAAAAGAGTTTGGGCGTAATTCTCCATGAGCTCCATAAAACATTTT GCCACTAGATTTTCTTTAACACAGAATTGGCACTAATGTGTGTTGTTTGATGAAATCTGTTATTCTTTCTCTTCATTTTT ATGTCTTGTACCTCCAAAGCCTCTGTACATGTCGTGCATGTGTCATGCCTTTTTTTGTTTGGCAAATGTAATGACTCTAA GCAGTCAAATTTCAAAAACTGTTGTATACCAGCAATTTATATAGATGGCAAGTTCAACTAAGAATTGAACATTATGACTT TGTACATTTATTTGTGGTTTCTGCATGGAATCCATGATAAAATCATAAAACAGGCTGAGTTTACATAGGTCCAAGGTAAG TTTTAGTTATTATTATTATTATTATTATTATTACTTTTTAAAACAATTAGTTGGATAATTGAAATGA
CDS sequence (LotjaGi6g1v0018700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCCACACTCAACATTGCGTTCCCTCTGGTGCACCCTATCTTCCTCACCCAACGCAACCCATCACCCCATTCTATCAC CCTCACCTCAAAATCACTCCGCAGCACCAGCACCATCGTTCGCGTTGATGCCAACGATTTCTTGGGTGACTTTGGTGCCA GAGACCCTTTCCCAGCTGAGATTGAGAGCCAGTTCGGAGACAAAGTGCTCGGAAACAACGACACTGAGCACAAAATCCTC ATCCCCAACATCGCTGCTCTTTCTCTTTCCCAGCAGAACTGCACTCCCGTTTCCCCTCTTCAGCACCCAATTTCAGAAGA TGATGCCTCCAAGCTCCTAAGAAAGGTTGTGGGTTGGAGATTAGTGCATGAGGAAAGTGGACTGAAGCTTCAATGTTTGT GGAAATTGAGAGATTTTAAATCTGGAGTTGAACTCATCAATAGGATCTCTAAGGTTGTAGAGGCTGAAGGCCATTTCCCA AATATCCACTTAGAACAACCAAATCAAATCAGAGCAGTACTATGGACAGCTTCTATTGGAGGATTAAGTATGAATGATTT CGTTGTAGCAGCAAAGATAGGTGAAATAAAGACATCTGATCTTGCCCCAAAGAAAAGAGTTTGGGCGTAA
Protein sequence (LotjaGi6g1v0018700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MATLNIAFPLVHPIFLTQRNPSPHSITLTSKSLRSTSTIVRVDANDFLGDFGARDPFPAEIESQFGDKVLGNNDTEHKIL IPNIAALSLSQQNCTPVSPLQHPISEDDASKLLRKVVGWRLVHEESGLKLQCLWKLRDFKSGVELINRISKVVEAEGHFP NIHLEQPNQIRAVLWTASIGGLSMNDFVVAAKIGEIKTSDLAPKKRVWA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 23 | 209 | 187 | 3.5E-97 | – | |
| PANTHER | 23 | 209 | 187 | 3.5E-97 | ||
| SUPERFAMILY | 102 | 196 | 95 | 9.16E-21 | ||
| Pfam | 103 | 195 | 93 | 1.0E-19 | ||
| Gene3D | 103 | 202 | 100 | 1.6E-19 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Biological process | Tetrahydrobiopterin biosynthetic process | The chemical reactions and pathways resulting in the formation of tetrahydrobiopterin, the reduced form of biopterin (2-amino-4-hydroxy-6-(1,2-dihydroxypropyl)-pteridine). It functions as a hydroxylation coenzyme, e.g. in the conversion of phenylalanine to tyrosine. | ||
| Molecular function | 4-alpha-hydroxytetrahydrobiopterin dehydratase activity | Catalysis of the reaction: (6R)-6-(L-erythro-1,2-dihydroxypropyl)-5,6,7,8-tetrahydro-4a-hydroxypterin = (6R)-6-(L-erythro-1,2-dihydroxypropyl)-7,8-dihydro-6H-pterin + H(2)O. |
Expression pattern of LotjaGi6g1v0018700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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