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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0049900 |
| Transcript ID | LotjaGi6g1v0049900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Beta-catenin-like protein 1; TAIR: AT3G02710.1 ARM repeat superfamily protein; Swiss-Prot: sp|O62703|CTBL1_BOVIN Beta-catenin-like protein 1; TrEMBL-Plants: tr|G7J7W2|G7J7W2_MEDTR Beta-catenin-like protein; Found in the gene: LotjaGi6g1v0049900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:8994295..8998219) extracted from Lotus japonicus Gifu genome v1.2.
ATAATCCTCTCAAGTGGCATTCCAACTTTTTTTTTTTTAAAATCACCTTCACTACGGACAAAACCACCAAAATAGAACAC TAGGGTTCATAGCTCCGGCGACAATGGAGGCAGCGAACGCCCGGAACCCCGCCACCAAGCGGAAGTTCGACGGAGCACCG TCGTCAAACAACGGCTTCACCAACGGAACCACCACCACCAACACCAACACGGTCGATCTTTCCCTTCTAGAAGCCATCGA GAAATCCCAGCACACCATCGAAGCTGTCGACCTCCGAACCCTAAAGAAGCTCGTCCTCGCCTTCGAGCGCCGCCTCAAGG ACAACATCGAAGCCCGCCTCAAGTACCCCAACCAACCCGACCGGTTCGCCGACTCCGAAGTCGAACTCCATGAAGAGCTT CAGAAGCTCAAGGTCCTCGCCGGAGCACCGGAGCTTTACCCTGACCTTGTCAACCTCAACGTCGTTCCCTCCATCGTCGA CCTTCTCAGCCACGATAACACCGACATCTCCATCGACGTCGTGCAGCTCCTCCAGGATCTCACCGATGAGGACGTGCTCG ACGACAACGACGACCCTGCCAAGGCCCTTGTGGATGCTCTTGTTGACAGCAGCGCGCTCGAGCTTCTCGTTCAGAATCTC CACCGTCTCTCGGATTCTGACCCTGATGAGAATGCTGCCATCTACAACACGCTTGCCACAATCGAGAATCTTATTGAAGT GAAGCCCTCAGTGGCGGAGCTGGTGTGCGAGAAGACCAAGATTTTGAAGTGGCTGCTGGGGAAGATTAAGGTGAGGGAGT TTGATGGAAACAAGCAGTATGCTTCAGAGATTCTGGCGATTCTGCTGCAGAGTAGCACCGCGAATCAGAAGAGGTTGGGG CAGATGAATGGGGTGGATGTGGTGCTTCAGGCCGTGGCCATGTACAAGTCGAAGGACCCTAAGAGTTCAGATGAGGAGGA GATGCTGGAGAATTTGTTTGATTGTTTGTGTTGTTTGTTGATGCCTTTGGAGAATAAAGAGAGGTTTGTGAAGGCTGAAG GGGTGGAGCTGATGATAATCATCATGAAGCAGAAGAAATTGGCTTATGGGTCGGCTATTAGGGCGCTTGATTTCGCAATG ACCAAGTACCCTCCGGCTTGTGAACGGTTTGTGGATGTTTTGGGGTTGAAGACAGCTTTTGCAGCTTTTATGGGTAAGGC AAGTGCTGCAACCTGTCCTCTATTGCCCATTTTGAAGAACTTGCAAGAATTCAAAATGTTGCCTGTTTTAAAATTGATAT TTGAATGGATTATTGTTCCGGGTGTTACTTTAGTTTTGTTCGAAATCCATTTGTTTTATCTTGGCTTATATCAGTTGTGA AATGTGATTTCATAGACATGTTGTAAATTTGATTACACTGAAAAGGTTTCATATTTTGATATATATAGATTCCCATCAGT AAGAAGAACAAGAAAGAACGGTACCAGGAGGACTTAGAGGAGCGCATTGTGTCCCTCATTGCTTCATTATTTGGTAAGCA GGCAAGTGAAATTTCATTTGAGTTTTGACATAGGATGTCTTATTTTGCTAGCTACTAGGCATGGCATGTATGCATAGTCC ATTCTTGTCTTTTCTTTTAATCTATTACAGTCAAGTCGCGCTCACATTTGATTATTGTTCTGTAAATACATAGTGCATCA TGCATTCGACTGGGTTTGTTCAACCTCAAACACAATGCATAGTTGTAACACTCTATATGGGTTACTTAGAATGTGGTTTT TGAGAGAGTCCAAATGTCCAATGGCATTGATTGGTCCATCCAGCCAATCTTACCTAGTCGGATAAGGCTGTTGTGGAAGG TTTTCTTTCCCACATTGTTGCCTATGTCTGGAATGTGGTACATGCCTTTATGGATCAAAATAAAATGTTGGTGCCTGACA CAATGTATGTAGATTTTAGTTTTCCCGTCTTGTGATATTGAACTTCAGTTCCTTGTCTTTTCCCAGGTGGAATCTTGAGG GGTTCAAGGAGAGATAGACTATTAAGTAAGTTTGTTGAAAATGAGTGCGAGAAGATAGACAGACTAATGGAACTATACAT CAGGTAGGTTGGACTTGACCTCTTCTCTTTGAAGTTCCTGATTATTGTATTTACTCCATTTCTTCCAAGATGCTATTTAT CAAGCCAAGAGTCAGTATAGGACTAAAAACTTGTATTAGGGATCTTGAATTATACACATTTATTAAGCTATCCTGTCCAT AATTTAAGCTCATTTTATATGCTGTTTAAATAAAAAACACATTTATATTCTCATTTGAGCATACTAAGTTTTCCCCTCAC CAGATATTCAGATAGAGTTAAAGCTGAAACTGAGCGGTTGGATCAAGTTGAGCTTGATGACTTGGAGGTAGCTTACTTTT TCTGCTTCTACATGTAATTTTTTAAAAAGGTACATGTCATAGCAAACTCTAATATTTCTGTTTTTTATAGATGGATGAAG ATGAAAAATACAATCGTAAACTTGAATCTGGACTATATACTCTTCAGGTAAGATTTTTTTTAATATCCTAGTTGATACTG AGAAACGACATATTAGTAGTTTTCTACGTTTTATGAACTCAAACTGCTTACCGTCTCTTTTTTATTTCTTAGAAAACATG ATTGGAATTTGTTTTTAAGCAACTGCACATGTATTAACTAGAGGATTTTATTTAGGTTTAGTTTCTTTCCATTTCAATTT GTATTTAAGAAAAATTATGGTAAAACACATGGTGCCTATATTAGCACCATCTATAAATAAGTGGATACCATACCAGTTTT ATATCACCTTTTGTTCACTGACAGTTTTATATGTGATTCTGCAGTTGATTGCTGTCATTTTGGGTCATGTTTGGTGCTCA GAGTAAGTATTTGCACCTTTGTAGTTTATACTGTAAAATTAAAAGCTTTGATATTCACCTGACTTCTTTTAATTGAATAC TTAATGGTCAGACATCCACAAATGAGAGGAAGAATTGAACTACTTCTCAAGCAGAACAGACTTGGTAAAAAGCATATCAA GGATATACTTCAGGTTGGTGGATAAATTTGAAATAATAATCTTTTTACTCTTTGCTTATTTTTATCTTGCTAGTGTTGGT TTCTATATTAAGGATGCATTGGTGAAGTCCTAAGTCCAAGTTAAATATCAGTTTGCAATATTTCTCATGCTTTTCTATAT TTGAAGGCAGCTCTTTCATGATTTGAAAATTGATATATTAGTCCGTTCCCACTAAAAAAATCAAGTTTCCAATAAGAATC CGTGAGCTTGGTTAACCCAACAGTGCTTTGACTGCAATTTACATGTTTTTTCCTTAAGGTTGCAGCCTTTTACTTAAATT TGGTAATTTGATTTAGTCCCTATTAAAAACTGAACATGCCTATCATCCCTGCTTAAGATGCGCTTGATTACTATATTCGG TTTGAAATCCAGTATTTTAAAAAGGAAATAGTAGGGGCTTCTAATGTATTGGATTTTCTTCTTTCCACGGTTTAGGAATA TCATGACAATATTGGTGATCTTGATGGACCAGAAGAGAAGGAGCGAGCACAGACAAAAATTCAGAAGTTCCTGTCGGCAT TATAACTTTTGTATGAGTTAAATGAAACTGATTGAAGTTTTATATTTTTTCTTGAATGCATGTAAAAATCTGTTATTTAT CCAGAACGAGGAATAGACTAGCTAAGTGTAATGGAGAAAGAACTCTGATACGGAAATGTTGTGGAGATGGTCCATTGTTT TTACTTTTTACACAGCTTCATTTCGTGTAGTTAAGATTTTTAGACATTTATTGTTAACATGGGAACACAGCTTCATTTTG TTGTGGAAAAGAATTATACAAACGTTTTAAGTTGGATCTACTATTTTGCCAGTATATAAAAAAACATGACAGTATATGAT TGGAG
CDS sequence (LotjaGi6g1v0049900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGGCAGCGAACGCCCGGAACCCCGCCACCAAGCGGAAGTTCGACGGAGCACCGTCGTCAAACAACGGCTTCACCAA CGGAACCACCACCACCAACACCAACACGGTCGATCTTTCCCTTCTAGAAGCCATCGAGAAATCCCAGCACACCATCGAAG CTGTCGACCTCCGAACCCTAAAGAAGCTCGTCCTCGCCTTCGAGCGCCGCCTCAAGGACAACATCGAAGCCCGCCTCAAG TACCCCAACCAACCCGACCGGTTCGCCGACTCCGAAGTCGAACTCCATGAAGAGCTTCAGAAGCTCAAGGTCCTCGCCGG AGCACCGGAGCTTTACCCTGACCTTGTCAACCTCAACGTCGTTCCCTCCATCGTCGACCTTCTCAGCCACGATAACACCG ACATCTCCATCGACGTCGTGCAGCTCCTCCAGGATCTCACCGATGAGGACGTGCTCGACGACAACGACGACCCTGCCAAG GCCCTTGTGGATGCTCTTGTTGACAGCAGCGCGCTCGAGCTTCTCGTTCAGAATCTCCACCGTCTCTCGGATTCTGACCC TGATGAGAATGCTGCCATCTACAACACGCTTGCCACAATCGAGAATCTTATTGAAGTGAAGCCCTCAGTGGCGGAGCTGG TGTGCGAGAAGACCAAGATTTTGAAGTGGCTGCTGGGGAAGATTAAGGTGAGGGAGTTTGATGGAAACAAGCAGTATGCT TCAGAGATTCTGGCGATTCTGCTGCAGAGTAGCACCGCGAATCAGAAGAGGTTGGGGCAGATGAATGGGGTGGATGTGGT GCTTCAGGCCGTGGCCATGTACAAGTCGAAGGACCCTAAGAGTTCAGATGAGGAGGAGATGCTGGAGAATTTGTTTGATT GTTTGTGTTGTTTGTTGATGCCTTTGGAGAATAAAGAGAGGTTTGTGAAGGCTGAAGGGGTGGAGCTGATGATAATCATC ATGAAGCAGAAGAAATTGGCTTATGGGTCGGCTATTAGGGCGCTTGATTTCGCAATGACCAAGTACCCTCCGGCTTGTGA ACGGTTTGTGGATGTTTTGGGGTTGAAGACAGCTTTTGCAGCTTTTATGGGTAAGATTCCCATCAGTAAGAAGAACAAGA AAGAACGGTACCAGGAGGACTTAGAGGAGCGCATTGTGTCCCTCATTGCTTCATTATTTGGTGGAATCTTGAGGGGTTCA AGGAGAGATAGACTATTAAGTAAGTTTGTTGAAAATGAGTGCGAGAAGATAGACAGACTAATGGAACTATACATCAGATA TTCAGATAGAGTTAAAGCTGAAACTGAGCGGTTGGATCAAGTTGAGCTTGATGACTTGGAGATGGATGAAGATGAAAAAT ACAATCGTAAACTTGAATCTGGACTATATACTCTTCAGTTGATTGCTGTCATTTTGGGTCATGTTTGGTGCTCAGAACAT CCACAAATGAGAGGAAGAATTGAACTACTTCTCAAGCAGAACAGACTTGGTAAAAAGCATATCAAGGATATACTTCAGGA ATATCATGACAATATTGGTGATCTTGATGGACCAGAAGAGAAGGAGCGAGCACAGACAAAAATTCAGAAGTTCCTGTCGG CATTATAA
Protein sequence (LotjaGi6g1v0049900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MEAANARNPATKRKFDGAPSSNNGFTNGTTTTNTNTVDLSLLEAIEKSQHTIEAVDLRTLKKLVLAFERRLKDNIEARLK YPNQPDRFADSEVELHEELQKLKVLAGAPELYPDLVNLNVVPSIVDLLSHDNTDISIDVVQLLQDLTDEDVLDDNDDPAK ALVDALVDSSALELLVQNLHRLSDSDPDENAAIYNTLATIENLIEVKPSVAELVCEKTKILKWLLGKIKVREFDGNKQYA SEILAILLQSSTANQKRLGQMNGVDVVLQAVAMYKSKDPKSSDEEEMLENLFDCLCCLLMPLENKERFVKAEGVELMIII MKQKKLAYGSAIRALDFAMTKYPPACERFVDVLGLKTAFAAFMGKIPISKKNKKERYQEDLEERIVSLIASLFGGILRGS RRDRLLSKFVENECEKIDRLMELYIRYSDRVKAETERLDQVELDDLEMDEDEKYNRKLESGLYTLQLIAVILGHVWCSEH PQMRGRIELLLKQNRLGKKHIKDILQEYHDNIGDLDGPEEKERAQTKIQKFLSAL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | 1 | 33 | 33 | - | – | |
| PANTHER | 4 | 534 | 531 | 2.5E-259 | – | |
| PANTHER | 4 | 534 | 531 | 2.5E-259 | ||
| MobiDBLite | 15 | 33 | 19 | - | – | |
| SMART | 34 | 140 | 107 | 3.8E-53 | ||
| Pfam | 41 | 140 | 100 | 1.9E-34 | ||
| Gene3D | 53 | 535 | 483 | 8.1E-182 | ||
| SUPERFAMILY | 99 | 432 | 334 | 1.06E-18 |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0049900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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