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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0050900 |
| Transcript ID | LotjaGi6g1v0050900.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | 3-oxoacyl-[acyl]-carrier-protein] reductase FabG; TAIR: AT2G38450.1 Sel1 repeat protein; Swiss-Prot: sp|Q5UP92|YL018_MIMIV Putative sel1-like repeat-containing protein L18; TrEMBL-Plants: tr|I3SG72|I3SG72_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0050900 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:9135771..9142514) extracted from Lotus japonicus Gifu genome v1.2.
TCTGTAAAATAATTTATTTTCTTTGTTAAAAAATAAAAATAAAAATCAATAGCGACAGGTAGAAACAGCCTTTGTTTTGT CATAGAAAAAAAAAAAACAGCTTCTTACGCCGCCCGGTTTGTCTCTCTCTCTCTGCAAAACAAAACCCCTTGTTAATTCT CCATTCAAAATCTACCATGATCTTCAGATAGCTTCACATCATAGAACCAGAAAAAAGGTACCAACTCTTCAATCAAAATC TCGATTATTTCGCACTTTGATTCAATCTAACAGATACCCATGATTTCAATTTTATCAGGGTCTCTCTCAACCGTGAAGCA AAACCCTAACCGCTGAAGTTGGAACAAAGAAGGGGTATATGGAGAGCAGCAGTGGAAGACCGACCAGAAACGGCCGTGTG CCGCTATCGGAAGTGGTGGCGGATTGTGTCAAGCGGTGGTTCAAGGATACTCTCAAGGAGGCTAAAGGAGGGGATATTAA TATGCAGGTTTTGGTGGGTCAGATGTACTGTACTGGCTATGGTGTTCCCAAAGATGCCCAGAAGGTAAAGGGTCTTGTTT GTTTTTACTTGGTACTTTGATTCAGTGTTCTTTGATTAATTTCAATTGGATTGGGGTTTGTTTGTTGTTTTTTGATTATT TGGATTCTCTAGTGCTTTGAAATTTCAATGTAGCTTGACCATAGAAGGGACAATTAAGTGTGTGTTTGAATTGCAGTTGA GTGTAACTTGAACGCGAGAAAGAACAATAAGTGTGTGTTTGGATTACAGTTGACCGTAACATGAATAACGTAAGTGGAAT TTCATCCGAATTAATATGAAGAGTTTAATAATGCACTCGAGCTAACAGATATCTAAACATAGTTGAGCTGGTGACTATAA AAAAGATGAAGAAAACATTAAGTCCTTTCTAGGGTCTTAACACACACACAATGCTTACATGCCTGTTTGCTTATCTGGGG TGGATGTGATGGCTCCATTAGTCTTTCTGGCTTGCAATTGTAAGGTCATTTTGACTTGGGTGATGGCAGAGATGGGTGTA AATAGCTTCTATTGTATAATATATGGATTTCATGAACCAGTAGTTGAATAAAAAGAGTTATGATGTGATTATGGAGGATG AGTAATGTGTGGAGACTGTAGTGTGGATGTACTTGTCTTTTGGTTATGAATGCTGATGTTATTGGTTTTGAGATGAAGGG AAGAATTTGGCTGACTAAAGCATCAAGGGTTAGGTCTTCAGTTTGGAAAGTTGGTGATAAGCGTCCAGGTAAGCTTTCCC TTGTTGCTAGCAGCTTATCATCTTTCTTTTCCATTGTAATCTAGAGTGGCTGTTTTTTTTATCTGGTGAATTTGTGTTAG GTTATAATGCAAGTGATTCTGATTCCGATGATTTGGAGGAGGATTCTTAAGCATACAAATTTGGTTTCTTGTCTAAACTT TTTAAGGTGAGTTTATCCCAATCTCTGAAGACTGTCTTCATGTAGTTAGTGACTTTTTTGTACCAAAACCATTATCTAAT GGAAAAATTTGAAGCTTTAGCTTTCAAGATGCATGGTTTATTCTTCCCTAGTTAAATTGATGTGTTTTTGTATCAGGCAA CTAAATTTACTTCTGGCTTTGAAATGTTATATCCTATTTTCTTAATGTTGTGTATTTGTGTCATATATTGAGAAGGTGGG TTTATGTATTAATTCAATTGAGATTTGAAATTCGTATTCACCTAGGACAGATGTGATACACAATGTTGCAACAATGTGTA TAACAACAAAACACAATCAGAGTACCAAAATTTAAATAAACAGTTAAACAAAAGCACACAACGAGTTGTTAACCCAGTTC AGTGAACATCACCTACGTCTGGAGGGCTTCAGCCCGAGAAAGATAATCCACTATAATAGTCAAGCACGTACAACAGGTTC ACCAAGAAGAGGCACAGTTTTAAACCTTTCTACCTATTGCTACCAGTGGCTTAATACTTAAGTCTCCCCCTAAGTATGAG AACCCCTCCTCTCTTTCTCTCAATCACTGCCTCAGTGATCTCACTTGTCAAAAGCAATAACAAGTTTTGCTGAGACTAGC ACTCAACTAAACATATCAACTTAGTACTTGCAATAGCACAGGAAGCACTAAGTTGTTACAATACTCACAACAGGACTCAA ATAATAAACCCTAAGATCAATATCTCACGCTCAGAATCCCTGTATAGCTAGGGTTTGTAAGCTCCTTTATATAGACGTTC AAACGAGGCTTGGATCTTCAATGGGTCGCACGTCAAAGAGTCCACAAAAGCACTTATGGACTGAATCTTCAAGGAATCAA ATCTTACCGGAATAAAATAACAGAACCAAGTAAATTGAAGTTCAAACTTTGAGATAGACTTGGTTCACACGTTATCAATC TTGTTACTTCAGCCAAGATTAAAACAAACACGCCTTCAGAAGATAAAACGCACAGCATAGAATAAATCTTCCGAGTCCCC ATACAGTCAGCAACCCAACAAAAAACTTGATTTCAGCAATTGAACTACCAATATACGTAAACGCAACATGTTGCTCTAGA TGTTGGAACATATGGTTGCACATCATGTTTTGAGCAAAATGCAGCCAATCAAGGCTTTGGAGTTTCCAAGAGCTTCTACA TCTTCTTCTTTCGACCACTCTTCTTCGGGCTTCAATTCTTCTGTTGAAGTTCCTTCTTTAGATACTACCACTGGATGTTT CCCACCTTTGACAATTGCTTTCCATGTTTTGTTGTCCATAGATTTAAGAAAAACAACCATATGAGCCTTCCAATAATCAT AGTTGGTACCATCCAATAAAGGTGGCCTAAGGAGTGATCCTCCTTCTTTAATGTTGTCCATGAAACCATAATACATATTC CCTGGAACTCACCTAAACAGAATAGGGTGCCTGCTCTGATGCCAATTGAAATTCGTATTCACCTAGGACAGATGTGATAC ACAATGTTGCAACAATGTGTATAACAACAAAACACAATCAGAGTACCAAAATTTAAATAAATAGTTAAACAAAAGCACAC AACGAGTTGTTAACCCAGTTCGGTGAACATCACCTACGTCTGGAGGGCTTCAGCCCGAGAAAGATAATCCACTATAATAG TCAAGCACATACAAAAGGTTCACCAAGAACAGACACAGTTCTAAACCTTTCTACCTATTGCTACCAGTGGCTTAATACTT AAGTCTCCCCCTAAGTATGAGAACCCCTTCTCTCTTTCTCTCAATCACTGCCTCAGTGATCTCACTTGTCAAAAGCAATA ACAAGTTTTGCTGAGACTAGCACTCAACTAAACATATCAAGTTAGTACTTGCAATAGCACATGAAGCACTAAGTTGTTAC AATACTCACAACAGGACTCAAATGATAAACCCTAAGATCAATATCTCACGCTCAGAATCTCTGTATAGCTAGGGTTTATA AGCTCCTTTATATAGACGTTCAAACGAGGCTTGGATCTTCAATGGGCCGCACGTCAAAGAGTCCACAAAAGCACTTCTGG ACAGAATCTTCAAGGAATCAAATCTTACCAGAATAAAATAACAGAACCAAGTAAATTGAAGTTCAAACTTTGAGATAGAC TTGGTTCACACGTTAACAATTTTGTTACTTCAGCCAAGATTAAAACAAACACGCCTTCAGAAGATAAAACGCACAGCATA GAATAAATCTTCTGAATCCCCATACAGTCAGTAGCCCAACAAACAACTTGATTTCAGCGATTGAACTACCAACATACGTA AACGCAACATGTTGCTCTAGATGTTGGAACATATGGTTGCACATCATGTTTTGAGCAAAATGCAGCCAATCAAAAGAACT ACAAGATTCCACCTTGACATCATCTTTTTAGCAACATGTGATTGATGAAATTTATGTTCTGAGATCCAGAAATGTGTCTG GCGTAATTAGGCATGTGATGTGATTTCACCACCTAAGATTTGAAGAGTAGTGCCTAGTCTACAGGGAAAGGGGTTTCAGG AATTGTAGATGCCAGCATTTTATATATTTTCTAGTATATCCTTCAACTTGAAAGGTTAACATGGCTTTCATGTTCTCTTT TATTTTGTGTGTTGTCCCCTTACTGAAGTCTCTTGCATGTATAATGGATATTATTAACCACATTTAAAAAATGAGGCATA TTAAAGAATGTCAAGATCAGTGCTGTCAATTCCCAAATCCCGGATAGCTGAGCATAGCAGCTGACCCCAAAAATGCTATA GCGGTATAGCGGGATGTCCCGCTGCGCTAAATTTCTATATATTTAAATACTTTATACAATATACATTAATAAAAAGTAAA AAATACTCAAAACCTATCATATTCATAATTAATATTAGGAATTCACTTGTCACAATAAGATATTATACAAGTTTGACCAG TGAGAGATAATAAAGGAGTGAATAAAGTCAAAATAGAACCATTAAAACAAAGAAGACTAAAAAATAAGAACCATAAAAGA GACAAAATAAACAACAAAAGAAAGAAAAAAGGGGGAAGATAACTCTACTGAGGTGAGGAGAAAAAAGACTGTTGGGGGGC TGCAGATGATTACCGGAGCGTCGTCAATCTTTGTGCGGTGGCTGGATGGCTGTTGCTTGATTGGTGCAGAATGGCTAAGA AGCTAGATGACGTTATTGGGAAGGACAAATGTGCGAAGAAGAAAACAGAGTGTTTTTCATCAATTTTAAGGAAACCTAAA ATTACCCTTCATTTATATTGACGGGAATCCCAATAATACGCCTAAAAGTTTACCCTAATCTTCGAACTGTGAGGGTAAGT TTGAGTTTTCCCTGTGTCTTCGTTATAGCGCCGTGAAGGCGTTGTGAAAACGGCTGCAATTTCAGCCGGGATGACCACGA CATTAAACTACTCTGCTATGGGACTTGCTGTAGATGCTAGGGGCTGCTCCGCCCCACTCCACTGCGATAGCGCCGGTATC GCGCATTATTGACAAGCCTTAAGATGCCGAGCTTATCCATAATTGCTTTGCATCAAAGTTGATAGTAATCAACATTCTTT GAAAATAAAACTTTCCAATATATGGTTTAAAAGATAATAATACAAAGCAAATAGTTGAGTTTCATTCTTTCGCTGTGACT GTTTTTCTTTTTCTTTTTAACCTTCTAGAAGTTTTATAGGGTTTCGGCAAAAAATCCACTAAGTTTTCTAGTTAGATCGC TATCAGGGGCTGGGATCGGGGAGCATATTGACTTTGGGTCAAACTGCACTCAAATTGATCTTATTTGCACAATGTGAGAG GACTGCAATGGAGAACAACGTTGCCTTGTCCTTCATTGTCGATAAAAAATATAGTGGCAATGTCACCATGTCCAAATAAA CCAGTTTCTGGTTGTGCCAAAGTCTAGTGGAGCAGTACAATAACATGTGGATATAATCTATTCTTTCACTTTTTAACATT TTGCAATGAAAGATGGAAAAGATTGAAATAATTATGTGGATATGAAAATATTTCTTAGCGTGCAGTGGAAACTGATAGGG TACAACAAGCTAGGTGGCCTTAAGACTGTTTTTACTGAGGTGAGCTAACGGATTTGTTGGAAGGGTTAACTACCCTGAGT GCATTGTAGTGTTTCACATTCATAACAGGCCATTCTTGATTGACATGTTAAACTACCCTTTCTGGTATCTTAGAACTCGG GTTTGACTTGACTCTACCGAAAAGCTAGCTTAGGGGTGAGGATTGTTGTACATTTTATATGGATTATTTCGGCCATAATA AATTTATCTTGTGCTCCTTTTGTTTTGTAGGTATGCTCGTGCTTCTTGATATCCCCATGGATGTTCTTCCCGTTTTACAT TTGCTCTGAGAGCAATGCATGATTTGATACATTGTTTTTTCCAACCAAAAAGAAAAGGAATCTTATAACTTTTTGAGTGA CTTGTTTGTAATTGAGGGTTTTTTTTATCCCTTCCATTGTTATATTACCATTTAATGCAAATAGGATAGGGATGTATATA GCTTTTTATTTTCTTAACATCATTCCGGAAGGCTAAAATCTCTAGAGTCCAGACTCGAGCAAAATTCAGGCATCCAAATG GTACTAACCTTCTAAATTTAGATTCCCATTTGTGTGGCTTTATGGCATGGGGTGAAACATTCTCATTTGTGTGGTTTCAG ACATCACTTTGTGCATATTGGATTTTGGAATGATCGGTAGTGGCTGTCAAAAGAAAAGAATTGGATTTCAGACATCACCT TTTCATTGACTAACTTCAACTAATTAAATTGTTCAACAGTATTACTGACGCTTGTAGGTTCAAACATCATATTTATGAAT CACTTCAGTTTAAATAATCAGCCCCTTGTTTTGTCAAATGATTGGTTGAGGGGAGCTTAATATTACATGGATGGGATATC GATATCCTACCTCAAAAGGGCAACACAATTGTTTGAGCTTTGGACATTGACGTTCTTATGGGGCTAACTGTGCTAATGAA TTTTCATTTTTGCACTCACCAGACTTGAACCTAATACCATGCTTATGAAGAGTCAAACAGTTCAAATAGAACAAGGCTCT TTTAGTGATCAACGTATTAGTATTAATAAGTGTTAATAAGCTCTTTAAAACTTGATTTTATTAATGTATGAACAAGTGTT TATATGATAAGTGTTTCTTGACAAATAATGGCGGAATATGGTGGGATATGAGGAATATTGTGGCCATATGGCAGGATATC GATTGTGGCGGAAAGTCAAAAAAC
CDS sequence (LotjaGi6g1v0050900.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAGAGCAGCAGTGGAAGACCGACCAGAAACGGCCGTGTGCCGCTATCGGAAGTGGTGGCGGATTGTGTCAAGCGGTG GTTCAAGGATACTCTCAAGGAGGCTAAAGGAGGGGATATTAATATGCAGGTTTTGGTGGGTCAGATGTACTGTACTGGCT ATGGTGTTCCCAAAGATGCCCAGAAGGGAAGAATTTGGCTGACTAAAGCATCAAGGGTTAGGTCTTCAGTTTGGAAAGTT GGTGATAAGCGTCCAGGTTATAATGCAAGTGATTCTGATTCCGATGATTTGGAGGAGGATTCTTAA
Protein sequence (LotjaGi6g1v0050900.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MESSSGRPTRNGRVPLSEVVADCVKRWFKDTLKEAKGGDINMQVLVGQMYCTGYGVPKDAQKGRIWLTKASRVRSSVWKV GDKRPGYNASDSDSDDLEEDS
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 5 | 100 | 96 | 3.8E-54 | – | |
| Gene3D | 22 | 82 | 61 | 1.8E-6 | ||
| SUPERFAMILY | 32 | 71 | 40 | 4.71E-6 | – | |
| MobiDBLite | 81 | 101 | 21 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0050900.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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