Your browser is unable to support new features implemented in HTML5 and CSS3 to render this site as intended. Your experience may suffer from functionality degradation but the site should remain usable. We strongly recommend the latest version of Google Chrome, OS X Safari or Mozilla Firefox. As Safari is bundled with OS X, if you are unable to upgrade to a newer version of OS X, we recommend using an open source browser. Dismiss message
| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0060600 |
| Transcript ID | LotjaGi6g1v0060600.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Plastid movement impaired protein; TAIR: AT1G66480.1 plastid movement impaired 2; Swiss-Prot: sp|Q6NLC8|Y1648_ARATH Uncharacterized protein At1g66480; TrEMBL-Plants: tr|A0A0S3RZS9|A0A0S3RZS9_PHAAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0060600 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:11026206..11032573) extracted from Lotus japonicus Gifu genome v1.2.
TGTATTATCACCACCCTTTGTCTCTAAGAAAGAGAGAAACCACAGTCCATAACAGTATAAAAAACTGAAGAAAGAAAACA AAGAAGGAAGTGATGGGAAACGCCATGGGAAGGAGCAAAAAAGCAAAGGTGATGAAAATAGACGGTGAAACGTTCAAGCT GAAGACTCCTGCTAGAGCACACGACGTCGTCAAGGACCATCCTGGCCACGTTCTCCTGGATTCACAATCAGTGAAGCACT TCGGGCTTCGGGCCAGGCCGCTGGAATCGCACCACGAGCTCAGGCCCAAGAAAATCTACTTCTTGGTGGAGCTACCCAAG GCGGCTCAGCCCAAACCACCGCCGCTACCGAGGAGGGCGCAATCAAGTGGTTTGCGTAGCATGAATGGCATGAGCGCTAA GGAGAGGCTCGACTTTCTCATGCTGTCAAAGCGCAGCGTTTCGGACCTCTCCTCGGCGAAGAGAGCCTCATCTAGTGGGC CCGCCGGCCTGAATGGGTCGGTGAGCATCAAAATGAGGCTGCCCAAGGCTCAGTGGAAAAAGCTCAACGAGGAGAGTAAC GACGGAGATGAAGTGGCGGAAAAGATCTTGAGTTTGTATATGGGGAGCCAAGCCACCGTGGAAGGTGGTGGAACAGTGGA GGACCACCACAGAGAGCTTCACAACGATCACACGCCGCAAAGGGTATGTTATTAATTTTATTACATTCTTTCTCCGATCT TTGAAATTTTGGTTTGCTGTTTTGTTTCCTAAGCATTCAACTTGAGCAAATTGCATGATGTTGACGTGCAAAAAAGTTTT GTTTGTGTGTAGATAGATACAAAGATACGGTCCTTAGCTTCAATTTTCTTTCATCTTAATTTGCGGATTTTATAAGTGCT TATATTTTAAGGAAAATGCAATCGCAATACGTACATCATGAGATGTAAATCTAAAAGTTTTCTTGTTTTGTTTTTGATAA TAATGCATTCAACTTTAATTTTTATTGAATGATGATAGTTAATTTAATCATATTAGTCTTAATAATCAACACATACTACC AATCGATGTACACTAGAGAGATAGAAAAAATAATATATATATATATTTTTCTTGCGATATACATATTTTTCTTGTTAATC GAAAGCGAGATAGAGAGAAAAAAAAATAATCAAAGAGAGATAAACTATTTCACGACTGCCGGGCAGGACACCAGTCACAT GCTGCATAGATCAGCAGAGGTCCACTCTTGGAGATATCCCCGAGGAGGGTAGTCACAATCTGAGATTTTACTGACTCAAG GGAGATTCAAACCCTCAACATAAAGGAACATATCATAAGATATATGTACTATTTGGTAGAACAGATATTAATATCATTAC TGTGGCAACGAGTACGGGAAGGATAAATTTGTAGGGTAAGGATGAATTTGTAAATAAGTTGACATATTATTTAATGACTA ATTAACTATATTCTGATCATCAAATATACGTAATGCAAGTTATCACTTTTTTTTTTGAGACTTTGCAAGTTATCACTTTA ATGGATTATATTTTGTATTAACTAAAAATATTTGGGTGGCTGTTAGGGTGCAAGTGTGTCTTAGGTCTTGCACCATGCAA GAGTAGAAATAACCCATAATAGTGGGTAAGGTGACTTGTTGCTAAAAAAAAATAAAAAATAGAAGATTACGAAAAACACC CTTCAAATCATTCTTTCTCTCTCTGCAACAACCCAGATCTCCTTTCTCTCCCTCCTCAGGCTTCATCACCAGCTCACTCC CCCTTCCCTTTCCATCCCCAACTTGCAAAGCCACCAGCCTAGACTGGAAAGGTAGGAACACAGATTGTAGCTTTGCACCA CCGCGATCGACGCCGAAAAAACGCATCGCAGGCGCAGGAAAAACGCAGAATCTAGATCCTTGCATCCCTTCGACAACCAC TGCGAAACCAGAAGAATAAATGGAGTTCATGACCAAACCTTCAATTTTTAGGTTTCGACCATACTTTGCTGGATCTGTTC GATCTGCTTCCCCTGGATTTGTTTCTTGCAATTCCTTCTTGTGCGGCTATGTTATGGGTTCTGCAATTTGGTGATGTGTG ATTTGGATGACCCACTTGCTCATCCCAAATCTGAAAATCCGTTGGCCAAAAGCACACAGATCTGCGATTTGTTTTACACC TTTGGTTTCTGGGTTTTTGCTCTGAGTTTTTTTTTCTGTGCTAAGTGTGCTGTTTTTTTATTTTGATGGTTTGTCCAGCT TGATTTGATCCAGTTAAATTAAATGACTTCAATGATAATGTTGTGGTTAAAGTTTGCAATCCGTCTCTTGTAATCTTACA AAAAAAAAATCCCAGATTCAATGATGTGTTACAACTCAATATTCTTTTGTCCTTTGGTTTCATAAATATGATATATACAA TGCTGTGTTGATGGATAACAAAGAAAAGGGGTGAGTGAAAATACAAAAAGAAGAGGAGGAAACAGGACCACCGCGCCAGA ATCCTAAGGCAGCCGCGAGGTGGTTGGTCGGAGTTGCAGGTGAAGAGATCAAAGAAGGTTGAGGGAGAAAGGATGAGGCA CACAATAAGGGGCTTTAGTGTCATTATCAAATTAAAATTTAAAAAATTAAACAATTCATTTAACAGGTCATCCAGGTTTC TCATTCTCCACCATGACAGGTGTTGTCATCCCATTGGCCCTGACATGTATGGCATGGGTGCAAGACCTATCAACTATTGC ACCTTATACATCACCAAATATTTGAATGTCAAATTTTGACATTGTCTTCTTTTCAGAAAGATTTGACATTGTCTAACTTT TTTTTTTTTTTGAAAAGTGACATTGTCTAACTTAAGAATCAAAAGGTTGTTAATCAGATTTAATTTATTATTTAAAAGAG ATTAGTCTTATCATGAAGTAAAGTATAACTGGGAAAATTTCATTTATCTACTTATATTAATGGTAGGGAGCAATCAACTT TAACTAGTTGATGCTAAATTGCCAAGGAAGTTAAGAAATTAAAATTATATATAGTGCAAATCTTAACTGCTCGGATCGAT GAATAGTTTCGGTTTTGTCTTCTATTTCTTGATGTAGTTTATGAGGTTTCTTCTTCTTTCTTTCTTTTCTGGTTAAATAT AAGGTTTCTTTTTTAGTATTTTCTACCATTTTTTTTAGCATATCTCACACCGAACTCAGTTTCCATTTAGTTTTGAACCA TTAAATATAAAATCGTGACAAAAGTCAGTTTTTTTCTTTCTTTTTTTTTACGTTACATGTGTTCATATTTGTTAAGAGGT TATCTATAGTAAAATATTAAAGTAAAATATGATTATTCATATGCACTTATATGTGAATTGAGAAGAATTTGTTAGGAGAG ACATATTATTTTATTGTGATATTCGAGCATCAATAGATTAGTCTCATGACTACCAGCTACGAAGATACCCTAAGAACCAA AATATGTTTTGCTCAAAATAAAATCTTGCAAATACTTCTTTCTTAAAAAATAAATAGTACAAAAGAAATGATTTTATCGA CAGCGTAGCCCCCTTTTCCTTTCTTCTCTACCTTTTAGTTTTCGTTTTAGGGTTTGCTCGGGTGGGCGCCGTGAGGCGGC AACCCTCCCTCTTATTTCCCTTTCGTTTGTCTTCCTCTTTCGCTCTTTCGTTAGCTTCCTGCTCTTTCACGTTTCAAAGG GGACTTGCGAGATCCATTTTTCGTCTACAATGGCTCGGCGTTCGGATCTGGTTTCTGTGCAGATCAGTCTTCTTGTAGAT CTGAAGCAGATCGTCTCTGGTTGCAGAAGATGTGTGTTTCAGGTGTTGCCTCATCCTGGTCTCTACCGATCCTGCTCCGC TCGATTTGCTTTTTTTGTATGTTCTGATTCTCAACACACACACAGTGAAGACCCCTTGTTGTGTTATTCAAGTTCCATGT CATTTATCAAGGTTTTTGTTGGTGGTTTTTTATTCAAGCCTGCGAGAAGCTTTTTCTCGCTGAGGAGAAGTTCTTGATGC AAAGGTTATTGTTGACCATGATTCGCAAAGGTCCAGAGGTTTTGGCTCTGTAACATATGCTACCAGTGAGGATGCATCTT CTACCATTCAAACCCTCGATGGTCAGGATCTTCATGGTCGGAGGATATGGGTAAATTTCCTTTTAGCTGCGCTGGCTCCT TTCGTAGCCGCCCATCGCTCCTACTTCTTGTTGTCGTTGTTCGGTTCGGTTTTCTTGGTTCTGTTTGTCATGGGGGTGTT GGGGACTAGGGTTGTTTGGTTGTGGGTTTTTGTTTCCATAGGGGTTCGGTTTTTGGTCAAGGTATGTTTGCGGTGGTTGA GCTTAGTGGCTCTTCGGCGAGACTCTGTGGATTGTGCTAGCGGTGGCGACTGTGATGGTGGGGTTAGGGTGTTGCTGGAG GCAAAGTTTATGCTCCTCATTTTGGATTTTTGGGTTCTTTGCAGGTCGCGACAGTAGTGTTTCATGGAGCGAGTTTTGGG TTGGCCTTATGGCCCGTGATTTGTGGTTCATACCTCGGGTTTTGGCGATTCCCTATGGATTTGTGCTTTGAAAATGGACG TTTCGTCGGCGCTCCTCTTTGTCTTGGTTTGTTTTCGGTGTTGTGTCATTCTGGATCTTATGCTTTCGATTTTTGGTCGA TGTCCCGTTCTGATTTGTGTCCCCTCGAATGACAAGATGCCTATGTTTTTGTTGGGATATGTGGCTTGTTCTTCATCTCG GTCCCCGACAGTTGCCTCTTCTCATCTTGGTTTGTTCGGTGCTTGATCCAAGTTTGGATCCTTGTTGATTGCTTGGGGTT TATCCTGCATTTTGTGCAAGTGCTTTTAAGGTGATGTATTTCAAAAGTTTTACTTGTTGGTGCACCAAAGCAATTTGATT CCAAGGTCTTTTGTCCAATAGCGGGTATCAATTTAGCTCGTCCTAAATTGTTAGTTTTTTAGGCTATCCTATGTACTATT GGAGGGGACTATGTTCACTTTGTTGAGTTTCGTTTGTATTATCGACCAATTTTCATCCAATAAAACTTTCAACTTTAAAA AAAAATGATTTACAATTTGCTATAAATAATGAAAGACGTTATCATTATTATTTCGATTAACTGTTTCATAAATAATTTTA TTAGAAAAGACTTTTGACTCTATTTTTACTAAAAAAAAAAATTCAAATAATTTATAAATATGAAAATAAATCATGTACAC AAAATTAAAATACGATATTTCATATCATATTACATAAAAATTAATTTTAATGTCTTGGGTTTTCAGTATTTCTCAAACCT TTTTCTGTTTTTATCAACCACAATGCATGAGGGTAATAATTACAAATTTTATCAACCCTCAAATTTGTTAGAGAATTCTA GCTGAGAGAAGTGTACTCAAACATTTTTTATCGGCCAATTTTTTTTTTCTTTTAGAAAGAGGTTTTTATCCTTTGTAGAG ATCAAACATGCACATGCATTTACATGTTTTTCAACTGTTATCACTTGAGTTTTCATTTGATAATGATGATTGAACATGAC TTGCCATCATTTACATTTGGCATACGCCTATGAAAAACACACGTTGGAGACTTGATGAAACGTGTATGCGAAAACCTCAA ACAAGTAGAACATAATTTTTATGTAATTACCTTAATTACCTAATGATACTTTAAGTTAATGTGTTCTTTCTTAATATGAA TTTTCACTTTTTCAGAAACGAGTGAGTTTCTACCCGGTGGAGCAAGAAGAAATTCGAGAAGAAGCAACTTAATATTAGTG CATGTTTGATTATTTTAGTTCATTGTAATTTTTCAAGCGTGTTCAAACAAATACTTAGTCACTTGTGAATAGCAGTCCTT CCTTGTAGTCCTTTAAGCCGGAACAAGCCTTAGCACAACACTAGGATGTTGGGTGCTTCTGAAGCAAGTTAATTAATTTT GTCCTATACATTTGAATAGTTGTAGTGCTCAGATTTGGTTTGACATTTACGCATTAGCTTACCCAAAAGTAACTTTTTTT TAGTTAATTAAAGAAGAACTCTGTGAGTGGATTGGGTGTTTGGCTCACCATTCACGCAGCTCAAACGGGTTTTTAAGTAA CACTAAAGTTATTCCAGATATTATAAAAATTCTTCAGGGTACAGAGTGGACAATTGAAAAGTGTGTCCATCAACAAGTAC CGAATTCACAAAATTATGTTATTATCCAAACAATCAAAATTGTTCTGTTCATTAATTATGTTATTGCCATTGGTCAATCA ATCAGCCAAATCCAACTGAGTAGAAGGTGAAAATACATTAAACAAGGAGAAAACCAATGTCAAATGCAAGACCCACCCTT GGCATTTCATCTTAAAAACAATCAACAATAAATTCTACTGTAAGTTCC
CDS sequence (LotjaGi6g1v0060600.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGGAAACGCCATGGGAAGGAGCAAAAAAGCAAAGGTGATGAAAATAGACGGTGAAACGTTCAAGCTGAAGACTCCTGC TAGAGCACACGACGTCGTCAAGGACCATCCTGGCCACGTTCTCCTGGATTCACAATCAGTGAAGCACTTCGGGCTTCGGG CCAGGCCGCTGGAATCGCACCACGAGCTCAGGCCCAAGAAAATCTACTTCTTGGTGGAGCTACCCAAGGCGGCTCAGCCC AAACCACCGCCGCTACCGAGGAGGGCGCAATCAAGTGGTTTGCGTAGCATGAATGGCATGAGCGCTAAGGAGAGGCTCGA CTTTCTCATGCTGTCAAAGCGCAGCGTTTCGGACCTCTCCTCGGCGAAGAGAGCCTCATCTAGTGGGCCCGCCGGCCTGA ATGGGTCGGTGAGCATCAAAATGAGGCTGCCCAAGGCTCAGTGGAAAAAGCTCAACGAGGAGAGTAACGACGGAGATGAA GTGGCGGAAAAGATCTTGAGTTTGTATATGGGGAGCCAAGCCACCGTGGAAGGTGGTGGAACAGTGGAGGACCACCACAG AGAGCTTCACAACGATCACACGCCGCAAAGGAAACGAGTGAGTTTCTACCCGGTGGAGCAAGAAGAAATTCGAGAAGAAG CAACTTAA
Protein sequence (LotjaGi6g1v0060600.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MGNAMGRSKKAKVMKIDGETFKLKTPARAHDVVKDHPGHVLLDSQSVKHFGLRARPLESHHELRPKKIYFLVELPKAAQP KPPPLPRRAQSSGLRSMNGMSAKERLDFLMLSKRSVSDLSSAKRASSSGPAGLNGSVSIKMRLPKAQWKKLNEESNDGDE VAEKILSLYMGSQATVEGGGTVEDHHRELHNDHTPQRKRVSFYPVEQEEIREEAT
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 211 | 211 | 5.3E-79 | – | |
| PANTHER | 1 | 211 | 211 | 5.3E-79 | – | |
| Pfam | 1 | 147 | 147 | 2.7E-21 | ||
| MobiDBLite | 184 | 215 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0060600.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
Loading expression data from ljgea-geneid. Please wait…