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LotjaGi6g1v0066600.4

Overview

Field Value
Gene ID LotjaGi6g1v0066600
Transcript ID LotjaGi6g1v0066600.4
Related isoforms 5
Lotus japonicus genome version Gifu v1.2
Description Mannose-1-phosphate guanyltransferase, putative; TAIR: AT2G39770.1 Glucose-1-phosphate adenylyltransferase family protein; Swiss-Prot: sp|O22287|GMPP1_ARATH Mannose-1-phosphate guanylyltransferase 1; TrEMBL-Plants: tr|A0A151QQL5|A0A151QQL5_CAJCA Mannose-1-phosphate guanyltransferase beta; Found in the gene: LotjaGi6g1v0066600
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:12613888..12615144) extracted from Lotus japonicus Gifu genome v1.2.

TTGAACATTGGTTTATGCGTGTCCTTTATGTATAGTCTTTATATGGCTTGATAATTGATATACCATCCTACCTACTTTCT TTCAATTTATACTTGTTGGACAGATAGAGGCTCTTAAGAACATTGGAGTTGATGAAGTGGTACTAGCTATCAATTACCAA CCAGAGGTGAGGATTGTGCCTCTCCTTACCAAACCTTAGTTATTCTAAAAAAGATTTATGTAAACGAAGTCGTATTCGGA GTTTCTTAACTCTTCTTCTTGCAGGTGATGTTGAATTTCTTGAAGGATTTTGAGGTAAAGCTCGGCATCAAAATCACTTG TTCTCAAGAAACTGAACCGCTGGGGACTGCAGGACCCTTGGCTCTTGCCAGGGATAAGCTGATAGATGAATCTGGTGAGC CATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTAAAAGAAATGATTGAATTCCACAAAGCTCATGGAGGC GAGGCTACCATAATGGTGACAAAGGTAATAGAATTGGAAAAGAAAAAAAACAAAAAAAACTATTACAAAATATTCAAAAT GTTAATACTTCATCTACATGCGTAGGTCGACGAGCCTTCAAAATATGGCGTCGTTGTGATGGAGGAGACTACCGGGCAGG TTGAGAAATTTGTAGAGAAACCAAAGTTGTTTGTTGGTAACAAGATCAATGCTGGAATCTACTTATTGAACCCCTCAGTT TTGGATCGAATTGAGTTGAGGCCCACTTCTATTGAGAAAGAGGTGTTTCCAAGTATCGCTGCTGATAAAAAGCTGTATGC AATGGTCCTACCAGGATTCTGGATGGACATTGGACAACCAAGGGACTACATTACTGGCCTGAGACTCTACCTGGACTCAC TGAGGAAAAAGTCTCCTTCTATGTTGGCCAGTGGCACTCACATTTTGGGGAATGTCATTGTGCATGAGACTGCCAAAATC GGTGAGGGATGTCTCATTGGACCTGATGTTGCAATTGGTCCTGGCTGTATTGTCGAGCCGGGCGTCAGGCTTTCCCGCTG CACTGTGATGCGCGGAGTTCGGATTAAGCAGCACGCTTGCATATCCAGCAGTATCATCGGGTGGCATTCCACTGTTGGGC AATGGGCTCGCGTGGAGAACATGACTATCCTTGGAGAAGATGTCCATGTGTGTGATGAAGTTTACAGCAATGGGGGTGTT GTTCTGCCCCACAAGGAGATCAAGTCAAGCATTCTGAAGCCAGAGATAGTGATGTGA
Download Genomic Sequence

CDS sequence (LotjaGi6g1v0066600.4) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGCGTGTCCTTTATATAGAGGCTCTTAAGAACATTGGAGTTGATGAAGTGGTACTAGCTATCAATTACCAACCAGAGCT CGGCATCAAAATCACTTGTTCTCAAGAAACTGAACCGCTGGGGACTGCAGGACCCTTGGCTCTTGCCAGGGATAAGCTGA TAGATGAATCTGGTGAGCCATTTTTTGTTCTCAACAGTGATGTTATCAGTGAGTACCCACTAAAAGAAATGATTGAATTC CACAAAGCTCATGGAGGCGAGGCTACCATAATGGTGACAAAGGTCGACGAGCCTTCAAAATATGGCGTCGTTGTGATGGA GGAGACTACCGGGCAGGTTGAGAAATTTGTAGAGAAACCAAAGTTGTTTGTTATCGCTGCTGATAAAAAGCTGTATGCAA TGGTCCTACCAGGATTCTGGATGGACATTGGACAACCAAGGGACTACATTACTGGCCTGAGACTCTACCTGGACTCACTG AGGAAAAAGTCTCCTTCTATGTTGGCCAGTGGCACTCACATTTTGGGGAATGTCATTGTGCATGAGACTGCCAAAATCGG TGAGGGATGTCTCATTGGACCTGATGTTGCAATTGGTCCTGGCTGTATTGTCGAGCCGGGCGTCAGGCTTTCCCGCTGCA CTGTGATGCGCGGAGTTCGGATTAAGCAGCACGCTTGCATATCCAGCAGTATCATCGGGTGGCATTCCACTGTTGGGCAA TGGGCTCGCGTGGAGAACATGACTATCCTTGGAGAAGATGTCCATGTGTGTGATGAAGTTTACAGCAATGGGGGTGTTGT TCTGCCCCACAAGGAGATCAAGTCAAGCATTCTGAAGCCAGAGATAGTGATGTGA
Download CDS Sequence

Protein sequence (LotjaGi6g1v0066600.4) extracted from Lotus japonicus Gifu v1.2 Proteins.

MRVLYIEALKNIGVDEVVLAINYQPELGIKITCSQETEPLGTAGPLALARDKLIDESGEPFFVLNSDVISEYPLKEMIEF HKAHGGEATIMVTKVDEPSKYGVVVMEETTGQVEKFVEKPKLFVIAADKKLYAMVLPGFWMDIGQPRDYITGLRLYLDSL RKKSPSMLASGTHILGNVIVHETAKIGEGCLIGPDVAIGPGCIVEPGVRLSRCTVMRGVRIKQHACISSSIIGWHSTVGQ WARVENMTILGEDVHVCDEVYSNGGVVLPHKEIKSSILKPEIVM
Download Protein Sequence

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
PANTHER
PTHR22572
4 124 121 4.1E-167 –
PANTHER
PTHR22572:SF145
4 124 121 4.1E-167 –
Gene3D
G3DSA:3.90.550.10
4 156 153 3.1E-34
IPR029044
SUPERFAMILY
SSF53448
5 235 231 4.06E-39
IPR029044
Pfam
PF00483
21 122 102 2.9E-22
IPR005835
PANTHER
PTHR22572
125 284 160 4.1E-167 –
PANTHER
PTHR22572:SF145
125 284 160 4.1E-167 –
Gene3D
G3DSA:2.160.10.10
157 279 123 6.8E-18 –
Pfam
PF00132
184 218 35 8.0E-8
IPR001451

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

GO term Namespace Name Definition Relationships
GO:0009058
Biological process Biosynthetic process The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
Subterm of
GO:0016779
Molecular function Nucleotidyltransferase activity Catalysis of the transfer of a nucleotidyl group to a reactant.
Subterm of

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Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0066600.4, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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