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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0067500 |
| Transcript ID | LotjaGi6g1v0067500.3 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Poly(A) RNA polymerase GLD2-like protein; TAIR: AT2G39740.1 Nucleotidyltransferase family protein; Swiss-Prot: sp|Q5XET5|HESO1_ARATH Protein HESO1; TrEMBL-Plants: tr|A0A151RDB4|A0A151RDB4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0067500 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:12837461..12843863) extracted from Lotus japonicus Gifu genome v1.2.
GGTCATTCTCATAGAACCTCTTCTCTTGCCCCGATTGTGTTGTTGAATGCTGAGGTCTCAAACGCATGAAAATCACAGTG CACTCCATTCTATACAGGTGCAATCAATCCACTTGAAAGCAAAGCAAGGACCACCATGGACCCGTTACACTTTTTTCCCG CGTCCATATCCAATGAATGAAGTAGAAAACCTCTCTTCCTAAGTAATACTCTTATACCCTTTTCTACTTCCTACTCACTC TCAACTAAAGTTGCTTCCTTTATCATTTTCAACAATGCCAATGTGAGTTTCTGCAATGACCCTTTATTTCTTTCACCTAA ATCACCCTCGATTTTCAACTGGGTACTTTTTTTTTTCTTCTTGACGGTGAGGTTTTTTTTTTGGTCTAGGTTGTCTCATT CTATGTTTATTGCTGTTTTGTTTTTTTAGGTTTTTTTATTAACTGGGTGTTTCTGGATTGGTTTGTGTTGTTGCTGGTTT CAATCAAAGTCATGGTTTTTGGGGTTGTTGCATTGGAAAGCAGAAAGATTTGAATGGATTTTTTGGGATTCTGTAATTTC TGTTCATGTTTTTTTGCATGGTTTGAATTTGAGTGAGATGTTGCTTCCCTAGGCATGGGGATTAATCTTTAATCACCGGA GAGAGGAGGAATCGGAGAGACACTCGTGGGTTTGTGGTGGATAAGTTAGATATGGTTAGCTTGTCTTTCAATTGTGAAAT GCTTTGGAGATCAATTGATTTTTTGGGTAGCTAGTTGTTTGTGATTGAGTCTTATGCTTGAGTTAGGCTTGTAAACAAGA ACAAAATAACCTCTGAAATGTTTGTCTATTAAATTTCTTATGTTTGGATATATTTTGGTTCTACTGTGTTAGTTTTATGA TGGAAAACCAAAAGATTTGATTTGAAGGAAATTTAAGAATTATCAGTATAGAAAATGATTTTATATTATCATTCATTAAT CTAAAGTCTAAAGTCTAAACACTCCTTCTGGATTCATGTCTATATTTAACTATATGTTGTTGAATGGAATAGATGCACAT ATTGCAGACTTTAACTTCATGAACAATTATATCAGGTCAGGGATACTGCTCCAAATATTTCAATGGATCTGGTGTGTGTT TCAAGAAGCCTATGCTCATAGATTGTGATCCTCTTGTCTTCATTTTCCCCATCTAGTGCTGCAAACCAATATTTGCAGTT GCGTTGTCAGTACATTCGCTGCTAGTTGGAGTTATTGAGAGACAAAATGAGCACACGTAGTATGTTGGATATTGTTCTAC ACGATATACTTCGGGTGGTCACACCCTTACAAGAAGATTGGGCGATACGTTTTGCAATTATTAATGATTTCCGAAGCATT GTTGAATCTGTGGAAAGCCTGAGAGGTGAACTGTCTAAAAGTTTTGTTTCTGCTCTTCCTTCTTCCTGCTTTTAATCTAG GATTTGCATTATTTTTTCATTAACATTGAAAGTAAGTAAGGAAAATATGCAAATAAATTTGTTTAATCCATAATTAACTG TGGGCTCTCCTTTATTATATTACACTTACTATGCATAAGTATATTGGCTGGTTTGAACACTAAAAGCTTTGAAGAGATGA ATTTTTTATCACTTAACAAAAAATGCAGCTTGTTGTAGACCAACTAAAGGCATGATTTCTGTATAATGAACGGTGATTCA TGATTTCATGCAGGGGATAATTACAATCTAAATGTTTTAGTTAACATTGGTTCTTCTTACACATATAATTGAATAGTTCT TATACTTACAATTTAATGTACAAGATTCATTAAATTACTTTACTGTATCCCACTTTTGAATGAACCAGCAGCAGGGGTGG ACCTATATTGTAGGGGTTGCCAGCAGGGCTCCCAATTTCTTTTCAAAATCACTATTACAGTTATGCAGTGTTACTAAATT GTTCCGTGGTCCTCATTCAGGAAAAGGAAAAATAAAGGATGGGTTTACTTGGATATGAATTGTATTTGTACTTGCACTTC TCTGTTATGAAATTTAACATTTTAAAATTGCATACTCATTTTTTTGGAACAGGAGCAACTGTTGAGCCATATGGATCATT TGTATCTAATCTCTTCACACGATGGGGTGACCTGGATATTTCAATTGAGTTATCAAATGGTTCACATATTTCATCTATTG GGAAAAATCAAAAACAGAGGTTATTGGGAGATCTTATAAAAGCTTTGAAACTGAAAGGTAATTTACTTCCACGTGAAAGT TGGCCGAGAAACATTGTATTTGTTGACACCACCTAGAAGATCCATTTCTCTGCCAGTTTGACAAATTTCTTCTTTTCAGT CTTCATCTTCTCATATCAAGCAATAGGATGTAAAGCCTAATTGAATTTTGTCATTGCAATGAAAATGTAAAATCAGTTAA GTTTGACAAATATCCCTGCAGGAAATTGTAGTGAGGAATGCAAGCAACTGTATTGTCATCATATTTTTGTTAATATATAT ACTCTGAAATTTACTAATACATACAAATAGAATACATATCATCTTGGTTACCATTGGTGTGTTATCTTGTTATTTGTGCA CTTGTCACTTTGAGGCTGTTATTTACAAATATTACTGATATTGGTAGGATAGTGTGGTTATGTGGCTGTTGTTCAAGATT AGAATATGAGGAGATGGCTTCTCTTCAAAATTCTGATTTCTGACTAGTTTGTTGTAACAGACATGTCTTTTTCTATTGAC TTTCTCCAAAGAGAAGAAAAATTACACTTCAGGAACTATAGGCAAAATAGTGATGAATGATCATATATCGTCAAGAAATT GCTTTGTAATAATCTTTTTAAATCTACGATGAGTCCTGCTAGACATCATGATAATTTCATGCATAATAAAACCATGAAAT CACTTATTGAACACTGTCAATCTCAGTACTGAATTTCAGTGGTTTATTTTATTCAAATATAATGCTTATTTAAAAAAATT ATTCGATAGTTTTACTTAGAGTGTAGAGTTCTATTAGTATACTAGTGCTTATTAAGTTTATAATGTCTTGCTACTTCTAA GTCTTATAGCCATAATTCGCTAAAGGGAATATATGGAATTTGTAAGTTTATTTAGCGTGTCCTAATAATTTTTCTAACAA CATTAATTTACAGGTGGATGGATCAACTTGCAGTTCATCTCCCATGCGCGAGTTCCCATTTTAATATTCAAAAGCCGCCG ACAGGGTGTATCTTGTGACATTTCAATCAATAACCTGCAGGGTGTGATCAAATCCAAGCTTTTGCTTTGGATTGACAGGA TAGATGGCCGCTTTCGAGATATGGTTTTAGTGGTATGCTCTTGTGCTTGAAGCAGGGTTCCTGTGCTAGAATTTGCTTCT GTGTGATTCATTCTTTCTACTTTGTGTAGGTAAAGGAATGGGCCAAAGCACATAAAATCAATAACTCTAAAACTGGAACT TTCAACTCGTATTCTCTCAGTTTGCTAGTAATCTTTCACTTTCAGGTACTCCTCATTTTTCATATTTCTTTTATGTGGTG TTGTTTTTTCTCCTCCTTTTTAAGGGCTTTTGGCTATGTTTTTTTGGGGGGGGGGGGGAGGGTGGATGCTGCAGCTAATT CAGGGAAATATTTTGTTGATTCTACTTTTATATCATTGTCATGTTATGTTATTTGGGTCGGGTTTTTGATGGAATGTTAT GCATTTTCTGTGTACGTTTTTTTACATCTTTCTACATGAACTATAACTTCAATCCTTTGGTAGTGCCTTCTGCTGCCTAG TATTGTAAGAACTGCTAGCTAAAACAGTTGGCGCATTCACTATAAAATGTTCAAACTGATTTTTGTCTTCACCCTGAAAA TAATATATGGATCATTGGGTCCTAACGTCTGATTTATGCAACGTTTTCTTTCATTTTCAGACATGTGTTCCTGCAATTTT GCCACCACTTAAAGATGTATATCCTGGCAATATGGTTGATAAACTGACAGGTACATTTCATATGAAGCATTATTGTTCTA GAATTTTACATATTTGGGTGAATCTTGTATAAGCTGAAACCTGGTTGATGAACGCTAAACTATACTTCTATTTTTCAATC TTCTGGTTGTGTGCATGCTTTGATGTTAAGATTTCCGCTAATGCACACAACTCCTTGCAATGCCAAGAGTTTAACGATCT TTCTGTCTCTTTTTCTCGCTGCATTACTTTACTCTTTCCTTTTATAGTATTTTTTTCAGTGGCCTTAGGTTAATATTTTC TTAAAGGATAGTGGTTTGTAGGTTCGAGTTGACAAACAATCATTTATGATGGCAGATTGTTGGTAGGGAATCCTTTGACT ATCCTTTTCCTCTTCCTCTTGCTCTTGTCAAGCAATTCTAGCATGATTGCTCAATCGCAGGCCTTGCCATTTTTTGTTTG ACTTTATGATGTTGGAAATGCTTGGTTTGTCGCAAAAAATATTATGTGAATTAAAATCATCGATTTACTTTTAGATGTTA AAAAAGATGATTTCACATTTTTCAATTGTCAAGCTAGCTATACAAAAGTTATGTATCTCTTGCCACCTGCAAATGTCTAC TCCTGCCGAGTGCTAATCTCACTCTCTAGATGTCCACTTCGAGGGATAAGGGTTGTGTGCTAATATCCTACATCACCTAC ACATATAACCAAAGTATTACTCATAACAATCCTCCCCTTGAGCTAGTTTTTGGGTTTAACTAGCTTTCATGGTCGCTATA GGTCTCTCCCGTTCTCAATGCTAATATAACCTTTAATTTGATGTAATATATGCAGGTGTTAGAGCTGATGCAGAGGATTT TATTGCGGAAACATGTAATGCTAACATAAACCGAATCATATCTGACAAATCCAGGCCAATTAACAGAAAATCTTTGCCTG AACTTTTTGTTGAATTCTTAAGAAAGGTAAACTATTCTTATCTTGATTTTATACTTTCAATTTATATTGGTGAAAAGAAT GTCTTTCCATTTAACATCTTTTTTATTTATTTGATGATTCACATTACTGAATTTTTTTTAAGGCTATATGTCTTCTTTCC TGAATTTGGTGATATCAATTAGAATCTTGTTGTGATGGATGTCGTGTATTTTTAATGAAAATGAAACATTTTATGTTGAT TTGTTGTTTAAGCTATATTTGGTAGTGAATTTCCTCAATCAATAGGATGGTCTAGGCATTGTTTATTTACAATAATGATA ATGATTTGAGCATGTTGCATGTTTGCAGTTTGCTCAAATGGATTCATGGGCCTCAGAGCTGGGAATTTGCCCATATACCG GACAATGGGAACAGATAAAGAACAACATGATATGGCTGCCCAAGACTTATGCAATATTTGTAATACTATTCTCCCTTGAA CAGTATTTTCCCCTTTACATTTTATGCTTGACATTAGGTTCTATCATGCATATTTTTTCCTGCTCTGCTATTGATATTTG TAACTCCGCCTATGCTGTGGCATAACCGGTCCTATAGTCTAACATAAAATTTGCCAATATCTTTGATATGGATTAAGGGA TCCATATAGTCTAACTACTTAGTGGGATAATGCTTTTGTTACATGTTACATTATGTGCTATTGATATTTGTATCTGCATT TTGGTTTTGGTTAGGTTGAGGATCCTTTTGAGCAGCCACAGAATACTGCAAGATCTGTCAGTGCAGGACAACTGAGTAAG ATATCCGAGGCATTTCTAAGGACATACAGCGTACTTACCTCCAAAAATCAGAATCAAAATTCTCTCTTGACTTTCTTAGC ACCACCAGAGGTGTCAAGGTTAATTATAAAACCTGTTATCCCAAATTACAATGGTGGTGGTGGCTATTTCCACCCACCTC AGCTGCCACTACATGTGCAGAGAGCCGAGCACCCACGCCATCAACATCGGTCGCAGCGTCGTGTTCACAATGGAAGTCAA GGAACAACCAATGGCCAAAATATGGAGGCAAAAGATCCAATAGCCAAAACACAGAAGGGAAACTCCAACAGTTCAACTTC AAAAGTACCACCTGTGCAGGTACGTCAAGGCCAGCAGATATGGAGGCAAAAGATCCAATAGCCAAAATTCAGAATGGGAC CTCTTTTTTTGCATTGAGAACTTAATGGGTTTAGCTATTCAACAGGTTCTAACTGTTGTCTACTTTTTGTTAATGAGTAC CAGAATAATGGTATTTCTTATGTCATGATAATGATTACCATGATTTTTTCTGCTGCTGGGGATTACAAGGATTATTACTT GATATTTTTGTGGGGGATTACTAATGTAATGCCTTAATTAGACACTTTATTAGACAATTCTATTCATTGCATATGACCCG GCTAAGTTGATTTGTTTGCTCTTGTTTAGCATTTTAGTAGAATTTGTCACCAACAAAAGATGAAAAAGGAAAATAAAGGA AGC
CDS sequence (LotjaGi6g1v0067500.3) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGAGCACACGTAGTATGTTGGATATTGTTCTACACGATATACTTCGGGTGGTCACACCCTTACAAGAAGATTGGGCGAT ACGTTTTGCAATTATTAATGATTTCCGAAGCATTGTTGAATCTGTGGAAAGCCTGAGAGGAGCAACTGTTGAGCCATATG GATCATTTGTATCTAATCTCTTCACACGATGGGGTGACCTGGATATTTCAATTGAGTTATCAAATGGTTCACATATTTCA TCTATTGGGAAAAATCAAAAACAGAGGTTATTGGGAGATCTTATAAAAGCTTTGAAACTGAAAGGTGGATGGATCAACTT GCAGTTCATCTCCCATGCGCGAGTTCCCATTTTAATATTCAAAAGCCGCCGACAGGGTGTATCTTGTGACATTTCAATCA ATAACCTGCAGGGTGTGATCAAATCCAAGCTTTTGCTTTGGATTGACAGGATAGATGGCCGCTTTCGAGATATGGTTTTA GTGGTAAAGGAATGGGCCAAAGCACATAAAATCAATAACTCTAAAACTGGAACTTTCAACTCGTATTCTCTCAGTTTGCT AGTAATCTTTCACTTTCAGACATGTGTTCCTGCAATTTTGCCACCACTTAAAGATGTATATCCTGGCAATATGGTTGATA AACTGACAGGTGTTAGAGCTGATGCAGAGGATTTTATTGCGGAAACATGTAATGCTAACATAAACCGAATCATATCTGAC AAATCCAGGCCAATTAACAGAAAATCTTTGCCTGAACTTTTTGTTGAATTCTTAAGAAAGTTTGCTCAAATGGATTCATG GGCCTCAGAGCTGGGAATTTGCCCATATACCGGACAATGGGAACAGATAAAGAACAACATGATATGGCTGCCCAAGACTT ATGCAATATTTGTTGAGGATCCTTTTGAGCAGCCACAGAATACTGCAAGATCTGTCAGTGCAGGACAACTGAGTAAGATA TCCGAGGCATTTCTAAGGACATACAGCGTACTTACCTCCAAAAATCAGAATCAAAATTCTCTCTTGACTTTCTTAGCACC ACCAGAGGTGTCAAGGTTAATTATAAAACCTGTTATCCCAAATTACAATGGTGGTGGTGGCTATTTCCACCCACCTCAGC TGCCACTACATGTGCAGAGAGCCGAGCACCCACGCCATCAACATCGGTCGCAGCGTCGTGTTCACAATGGAAGTCAAGGA ACAACCAATGGCCAAAATATGGAGGCAAAAGATCCAATAGCCAAAACACAGAAGGGAAACTCCAACAGTTCAACTTCAAA AGTACCACCTGTGCAGGTACGTCAAGGCCAGCAGATATGGAGGCAAAAGATCCAATAG
Protein sequence (LotjaGi6g1v0067500.3) extracted from Lotus japonicus Gifu v1.2 Proteins.
MSTRSMLDIVLHDILRVVTPLQEDWAIRFAIINDFRSIVESVESLRGATVEPYGSFVSNLFTRWGDLDISIELSNGSHIS SIGKNQKQRLLGDLIKALKLKGGWINLQFISHARVPILIFKSRRQGVSCDISINNLQGVIKSKLLLWIDRIDGRFRDMVL VVKEWAKAHKINNSKTGTFNSYSLSLLVIFHFQTCVPAILPPLKDVYPGNMVDKLTGVRADAEDFIAETCNANINRIISD KSRPINRKSLPELFVEFLRKFAQMDSWASELGICPYTGQWEQIKNNMIWLPKTYAIFVEDPFEQPQNTARSVSAGQLSKI SEAFLRTYSVLTSKNQNQNSLLTFLAPPEVSRLIIKPVIPNYNGGGGYFHPPQLPLHVQRAEHPRHQHRSQRRVHNGSQG TTNGQNMEAKDPIAKTQKGNSNSSTSKVPPVQVRQGQQIWRQKIQ
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 6 | 380 | 375 | 1.2E-109 | – | |
| PANTHER | 6 | 380 | 375 | 1.2E-109 | – | |
| SUPERFAMILY | 7 | 147 | 141 | 5.76E-26 | ||
| CDD | 27 | 148 | 122 | 4.33076E-25 | – | |
| Gene3D | 31 | 151 | 121 | 4.2E-63 | ||
| Gene3D | 152 | 330 | 179 | 4.2E-63 | – | |
| SUPERFAMILY | 154 | 337 | 184 | 7.69E-34 | – | |
| MobiDBLite | 380 | 445 | 66 | - | – | |
| MobiDBLite | 394 | 445 | 52 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0067500.3, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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