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IPR043519

Description

IPR043519 is a Nucleotidyltransferase superfamily.

<p>This entry represents the Pol beta-like nucleotidyltransferase (NT) superfamily. In the majority of enzymes in this superfamily, two carboxylates, Dx[D/E], together with a third more distal carboxylate, coordinate two divalent metal cations involved in a two-metal ion mechanism of nucleotide addition. The following functional groups of nucleotidyltransferases have been included in this superfamily [[cite:PUB00013566]]:</p> <ul> <li>PolyA polymerases</li> <li>Protein nucleotidyltransferases, such as GlnD and GlnE</li> <li>CCA-adding enzyme</li> <li>Interferon-induced 2'-5' synthetase</li> <li>DNA polymerase beta and terminal deoxynucleotidyltransferase</li> <li>Antibiotic nucleotidyltransferases</li> </ul>

This description is obtained from EB-eye REST.

Associated GO terms

Unable to find any GO terms for the transcript with the identifier.

Associated Lotus transcripts 59

Transcript Name Description Predicted domains Domain count
Multifunctional CCA protein; TAIR: AT1G22660.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|P21269|CCA1_YEAST CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|I1NH95|I1NH95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0094900 8
Poly(A) polymerase; TAIR: AT3G51620.2 PAP/OAS1 substrate-binding domain superfamily; Swiss-Prot: sp|Q5XET5|HESO1_ARATH Protein HESO1; TrEMBL-Plants: tr|G7K0S5|G7K0S5_MEDTR Nucleotidyltransferase; Found in the gene: LotjaGi1g1v0106900 9
Poly(A) RNA polymerase cid14; TAIR: AT3G56320.1 PAP/OAS1 substrate-binding domain superfamily; Swiss-Prot: sp|Q5XET5|HESO1_ARATH Protein HESO1; TrEMBL-Plants: tr|A0A072VBJ5|A0A072VBJ5_MEDTR Nucleotidyltransferase domain protein; Found in the gene: LotjaGi1g1v0308400 12
Poly(A) RNA polymerase cid14; TAIR: AT3G56320.1 PAP/OAS1 substrate-binding domain superfamily; Swiss-Prot: sp|Q5XET5|HESO1_ARATH Protein HESO1; TrEMBL-Plants: tr|A0A072VBJ5|A0A072VBJ5_MEDTR Nucleotidyltransferase domain protein; Found in the gene: LotjaGi1g1v0308400 12
Poly(A) RNA polymerase GLD2; TAIR: AT3G45750.1 Nucleotidyltransferase family protein; Swiss-Prot: sp|Q5XET5|HESO1_ARATH Protein HESO1; TrEMBL-Plants: tr|A0A1J7GCK4|A0A1J7GCK4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0326600 10
Poly(A) RNA polymerase GLD2; TAIR: AT3G45750.1 Nucleotidyltransferase family protein; Swiss-Prot: sp|Q5XET5|HESO1_ARATH Protein HESO1; TrEMBL-Plants: tr|A0A1J7GCK4|A0A1J7GCK4_LUPAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0326600 10
Poly(A) RNA polymerase GLD2; TAIR: AT3G45750.1 Nucleotidyltransferase family protein; Swiss-Prot: sp|Q5XET5|HESO1_ARATH Protein HESO1; TrEMBL-Plants: tr|A0A151T4D7|A0A151T4D7_CAJCA Terminal uridylyltransferase 7; Found in the gene: LotjaGi1g1v0326700 9
Nucleolar protein 6; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q6NRY2|NOL6_XENLA Nucleolar protein 6; TrEMBL-Plants: tr|I1LHS8|I1LHS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0329000 18
Nucleolar protein 6; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q6NRY2|NOL6_XENLA Nucleolar protein 6; TrEMBL-Plants: tr|A0A0R0HDH8|A0A0R0HDH8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0329000 20
Nucleolar protein 6; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q6NRY2|NOL6_XENLA Nucleolar protein 6; TrEMBL-Plants: tr|A0A0R0HDH8|A0A0R0HDH8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0329000 20
Nucleolar protein 6; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q6NRY2|NOL6_XENLA Nucleolar protein 6; TrEMBL-Plants: tr|I1LHS8|I1LHS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0329000 20
Nucleolar protein 6; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q6NRY2|NOL6_XENLA Nucleolar protein 6; TrEMBL-Plants: tr|A0A0R0HDH8|A0A0R0HDH8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0329000 20
Nucleolar protein 6; TAIR: AT1G63810.1 nucleolar protein; Swiss-Prot: sp|Q6NRY2|NOL6_XENLA Nucleolar protein 6; TrEMBL-Plants: tr|I1LHS8|I1LHS8_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0329000 20
Multifunctional CCA protein; TAIR: AT3G48830.1 tRNA nucleotidyltransferase/polyA polymerase family protein; Swiss-Prot: sp|P0ABF3|PCNB_ECO57 Poly(A) polymerase I; TrEMBL-Plants: tr|K7KL92|K7KL92_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0334300 12
Poly(A) polymerase-like protein; TAIR: AT4G32850.5 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|A0A072V3Z3|A0A072V3Z3_MEDTR Poly(A) polymerase-like protein; Found in the gene: LotjaGi1g1v0409600 18
Poly(A) polymerase-like protein; TAIR: AT4G32850.2 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|I1K9H4|I1K9H4_SOYBN Uncharacterized protein; Found in the gene: LotjaGi1g1v0409600 18
GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp|P0DKG8|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QGP0|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000 31
GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp|P0DKG8|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QGP0|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000 32
GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp|P0DKG8|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QGP0|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000 32
GTP pyrophosphokinase; TAIR: AT4G02260.2 RELA/SPOT homolog 1; Swiss-Prot: sp|P0DKG8|RSH1L_ARATH Putative GTP diphosphokinase RSH1, chloroplastic; TrEMBL-Plants: tr|A0A0B2QGP0|A0A0B2QGP0_GLYSO GTP pyrophosphokinase; Found in the gene: LotjaGi1g1v0763000 31
Poly(A) RNA polymerase cid14; TAIR: AT3G61690.1 nucleotidyltransferase; Swiss-Prot: sp|Q9UTN3|CID14_SCHPO Poly(A) RNA polymerase cid14; TrEMBL-Plants: tr|A0A0L9VD95|A0A0L9VD95_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0791700 9
Poly(A) RNA polymerase cid14; TAIR: AT3G61690.1 nucleotidyltransferase; Swiss-Prot: sp|Q9UTN3|CID14_SCHPO Poly(A) RNA polymerase cid14; TrEMBL-Plants: tr|A0A0L9VD95|A0A0L9VD95_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0791700 9
Poly(A) RNA polymerase cid14; TAIR: AT3G61690.1 nucleotidyltransferase; Swiss-Prot: sp|Q9UTN3|CID14_SCHPO Poly(A) RNA polymerase cid14; TrEMBL-Plants: tr|A0A0S3S4Z8|A0A0S3S4Z8_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0791700 9
Poly(A) RNA polymerase cid14; TAIR: AT3G61690.1 nucleotidyltransferase; Swiss-Prot: sp|Q9UTN3|CID14_SCHPO Poly(A) RNA polymerase cid14; TrEMBL-Plants: tr|A0A0L9VD95|A0A0L9VD95_PHAAN Uncharacterized protein; Found in the gene: LotjaGi1g1v0791700 9
Poly(A) polymerase; TAIR: AT1G17980.1 poly(A) polymerase 1; Swiss-Prot: sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1; TrEMBL-Plants: tr|I1L486|I1L486_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0201600 22
Poly(A) RNA polymerase GLD2-like protein; TAIR: AT2G39740.1 Nucleotidyltransferase family protein; Swiss-Prot: sp|Q5XET5|HESO1_ARATH Protein HESO1; TrEMBL-Plants: tr|A0A151RDB4|A0A151RDB4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi2g1v0269300 8
DNA polymerase lambda; TAIR: AT1G10520.1 DNA polymerase lambda (POLL); Swiss-Prot: sp|Q9FNY4|DPOLL_ARATH DNA polymerase lambda; TrEMBL-Plants: tr|I1JCZ1|I1JCZ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0314500 30
DNA polymerase lambda-like protein; TAIR: AT1G10520.1 DNA polymerase lambda (POLL); Swiss-Prot: sp|Q9FNY4|DPOLL_ARATH DNA polymerase lambda; TrEMBL-Plants: tr|A0A072TY09|A0A072TY09_MEDTR DNA polymerase lambda-like protein; Found in the gene: LotjaGi2g1v0314500 36
DNA polymerase lambda-like protein; TAIR: AT1G10520.1 DNA polymerase lambda (POLL); Swiss-Prot: sp|Q9FNY4|DPOLL_ARATH DNA polymerase lambda; TrEMBL-Plants: tr|A0A072TY09|A0A072TY09_MEDTR DNA polymerase lambda-like protein; Found in the gene: LotjaGi2g1v0314500 36
DNA polymerase lambda; TAIR: AT1G10520.1 DNA polymerase lambda (POLL); Swiss-Prot: sp|Q9FNY4|DPOLL_ARATH DNA polymerase lambda; TrEMBL-Plants: tr|I1JCZ1|I1JCZ1_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0314500 37
Multifunctional CCA protein; TAIR: AT2G17580.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|P44439|PCNB_HAEIN Poly(A) polymerase I; TrEMBL-Plants: tr|K7K447|K7K447_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0356000 13
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9SYH1|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A0B2R105|A0A0B2R105_GLYSO Putative GTP pyrophosphokinase; Found in the gene: LotjaGi2g1v0448600 22
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9SYH1|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A0B2R105|A0A0B2R105_GLYSO Putative GTP pyrophosphokinase; Found in the gene: LotjaGi2g1v0448600 22
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase, putative; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9SYH1|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A0R0HH22|A0A0R0HH22_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448600 22
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9SYH1|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A0R0LJ13|A0A0R0LJ13_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448600 22
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9SYH1|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A0R0LJ13|A0A0R0LJ13_SOYBN Uncharacterized protein; Found in the gene: LotjaGi2g1v0448600 22
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9SYH1|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A0B2R105|A0A0B2R105_GLYSO Putative GTP pyrophosphokinase; Found in the gene: LotjaGi2g1v0448600 22
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9SYH1|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A0B2R105|A0A0B2R105_GLYSO Putative GTP pyrophosphokinase; Found in the gene: LotjaGi2g1v0448600 16
Guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9SYH1|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A0B2R105|A0A0B2R105_GLYSO Putative GTP pyrophosphokinase; Found in the gene: LotjaGi2g1v0448600 16
Protein Iojap/ribosomal silencing factor RsfS; TAIR: AT1G67620.1 Lojap-related protein; Swiss-Prot: sp|Q9CAF9|IOJAM_ARATH Protein Iojap-related, mitochondrial; TrEMBL-Plants: tr|I3S833|I3S833_LOTJA Uncharacterized protein; Found in the gene: LotjaGi3g1v0063400 9
Protein Iojap; TAIR: AT3G12930.1 Lojap-related protein; Swiss-Prot: sp|Q9LDY9|IOJAC_ARATH Protein Iojap, chloroplastic; TrEMBL-Plants: tr|I1MJ71|I1MJ71_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0139700 14
Poly(A) polymerase; TAIR: AT4G00060.1 Nucleotidyltransferase family protein; Swiss-Prot: sp|Q68ED3|PAPD5_MOUSE Non-canonical poly(A) RNA polymerase PAPD5; TrEMBL-Plants: tr|A0A0R0KL49|A0A0R0KL49_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0205500 15
Poly(A) polymerase; TAIR: AT5G53770.1 Nucleotidyltransferase family protein; Swiss-Prot: sp|Q7KVS9|TRF41_DROME Non-canonical poly(A) RNA polymerase protein Trf4-1; TrEMBL-Plants: tr|A0A151SVQ3|A0A151SVQ3_CAJCA PAP-associated domain-containing protein 5; Found in the gene: LotjaGi3g1v0270700 16
Poly(A) polymerase; TAIR: AT4G32850.10 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|A0A151SH17|A0A151SH17_CAJCA Poly(A) polymerase; Found in the gene: LotjaGi3g1v0371900 18
Poly(A) polymerase; TAIR: AT4G32850.10 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|A0A151SH17|A0A151SH17_CAJCA Poly(A) polymerase; Found in the gene: LotjaGi3g1v0371900 18
Poly(A) polymerase; TAIR: AT4G32850.5 nuclear poly(a) polymerase; Swiss-Prot: sp|Q8VYW1|PAPS4_ARATH Nuclear poly(A) polymerase 4; TrEMBL-Plants: tr|A0A151SH17|A0A151SH17_CAJCA Poly(A) polymerase; Found in the gene: LotjaGi3g1v0371900 18
Poly(A) RNA polymerase cid14; TAIR: AT3G61690.1 nucleotidyltransferase; Swiss-Prot: sp|Q9UTN3|CID14_SCHPO Poly(A) RNA polymerase cid14; TrEMBL-Plants: tr|K7KZV5|K7KZV5_SOYBN Uncharacterized protein; Found in the gene: LotjaGi3g1v0393900 9
Rela/spot homolog 3 family protein; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9SYH1|RSH3C_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A151S6W9|A0A151S6W9_CAJCA Putative guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; Found in the gene: LotjaGi3g1v0414100 17
RELA/SPOT; TAIR: AT1G54130.1 RELA/SPOT homolog 3; Swiss-Prot: sp|Q9M5P5|RSH3L_ARATH Probable GTP diphosphokinase RSH3, chloroplastic; TrEMBL-Plants: tr|A0A151S6W9|A0A151S6W9_CAJCA Putative guanosine-3',5'-bis(Diphosphate) 3'-pyrophosphohydrolase; Found in the gene: LotjaGi3g1v0414100 12
Poly(A) RNA polymerase cid11; TAIR: AT2G45620.1 Nucleotidyltransferase family protein; Swiss-Prot: sp|O64642|URT1_ARATH UTP:RNA uridylyltransferase 1; TrEMBL-Plants: tr|A0A151UCB0|A0A151UCB0_CAJCA Poly(A) RNA polymerase cid11; Found in the gene: LotjaGi3g1v0429800 13
RELA/SPOT homolog 3; TAIR: AT3G17470.2 Ca2+-activated RelA/spot-like protein; Swiss-Prot: sp|Q84R11|CRSH_ARATH Probable GTP diphosphokinase CRSH, chloroplastic; TrEMBL-Plants: tr|G7JR05|G7JR05_MEDTR Ca2+-activated RelA/SpoT-like protein; Found in the gene: LotjaGi4g1v0313700 24
Multifunctional CCA protein; TAIR: AT3G48830.1 tRNA nucleotidyltransferase/polyA polymerase family protein; Swiss-Prot: sp|P44439|PCNB_HAEIN Poly(A) polymerase I; TrEMBL-Plants: tr|G7LI47|G7LI47_MEDTR tRNA nucleotidyltransferase/poly(A) polymerase; Found in the gene: LotjaGi4g1v0420500 15
Multifunctional CCA protein; TAIR: AT3G48830.1 tRNA nucleotidyltransferase/polyA polymerase family protein; Swiss-Prot: sp|P44439|PCNB_HAEIN Poly(A) polymerase I; TrEMBL-Plants: tr|G7LI47|G7LI47_MEDTR tRNA nucleotidyltransferase/poly(A) polymerase; Found in the gene: LotjaGi4g1v0420500 15
Poly(A) polymerase; TAIR: AT1G17980.1 poly(A) polymerase 1; Swiss-Prot: sp|Q9LMT2|PAPS1_ARATH Nuclear poly(A) polymerase 1; TrEMBL-Plants: tr|A0A061FVR9|A0A061FVR9_THECC Poly(A) polymerase 1 isoform 1; Found in the gene: LotjaGi4g1v0447300_LC 15
Multifunctional CCA protein; TAIR: AT1G22660.1 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|I1NH95|I1NH95_SOYBN Uncharacterized protein; Found in the gene: LotjaGi5g1v0281000 10
Poly(A) RNA polymerase GLD2-like protein; TAIR: AT2G39740.1 Nucleotidyltransferase family protein; Swiss-Prot: sp|Q5XET5|HESO1_ARATH Protein HESO1; TrEMBL-Plants: tr|A0A151RDB4|A0A151RDB4_CAJCA Uncharacterized protein; Found in the gene: LotjaGi6g1v0067500 9
TRNA nucleotidyltransferase (CCA-adding enzyme); TAIR: AT1G22660.3 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|Q42867|Q42867_LUPAL tRNA nucleotidyltransferase; Found in the gene: LotjaGi6g1v0218500_LC 11
TRNA nucleotidyltransferase (CCA-adding enzyme); TAIR: AT1G22660.3 Polynucleotide adenylyltransferase family protein; Swiss-Prot: sp|Q9P4S5|CCA1_CANGA CCA tRNA nucleotidyltransferase, mitochondrial; TrEMBL-Plants: tr|Q42867|Q42867_LUPAL tRNA nucleotidyltransferase; Found in the gene: LotjaGi6g1v0218500_LC 11
Poly(A) polymerase; TAIR: AT3G06560.1 poly(A) polymerase 3; Swiss-Prot: sp|Q56XM9|PAPS3_ARATH Nuclear poly(A) polymerase 3; TrEMBL-Plants: tr|A0A1J7ILW7|A0A1J7ILW7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0261000 16

Co-occuring domains 1

A list of co-occurring predicted domains within the L. japonicus gene space:

Predicted domain Source Observations Saturation (%)
cd05402 CDD 1 1.69