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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0070400 |
| Transcript ID | LotjaGi6g1v0070400.2 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Calcium-dependent lipid-binding (CaLB domain) family protein; TAIR: AT1G07310.1 Calcium-dependent lipid-binding (CaLB domain) family protein; Swiss-Prot: sp|Q58FX0|BAP2_ARATH BON1-associated protein 2; TrEMBL-Plants: tr|V7D2R0|V7D2R0_PHAVU Uncharacterized protein; Found in the gene: LotjaGi6g1v0070400 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:13426519..13431282) extracted from Lotus japonicus Gifu genome v1.2.
AGACTGTTAGTTGTTTGCAAAGCTGCACAGAACCTCGAAGAAAAGAGCAATGACATCATCTCGTCCTCCTCCGTCGAAGT CGGTGGATCTCGACCTCACCATCGTCTCCGCCAAGCATCTCAAGAACGTCAACTGGAAAACCGGCGACCTCAAGCCGTAC GTCGTCTTCTGGGTCGACCCCGACCGCCGTCTCGCCACCAAATCCGACGACTCCGGCAACACCTCCCCCGTCTGGAACGA GCGTTTCACCCTCCCTCTCTCTCACCCCATCACTGACTCCTTTCTCACCCTCGAGATCTTCCACTCCAAACCCTCCGATA CCCCCAAACCCCTCGTCGCCACCGTCCGCCTCCTCCTCGCCGACCTCCACGACCTCCATGATTCCTCCAGCATCCGCAAA TTCACCCTCCTCCGCCCCTCCGGCCGCCCCCACGGCAAGATCCACCTCAAGCTCGGCCTCCTTGGTCGCCCCCAACCCCT CGATTACCCCAACCCAAGCTCCAACCCCAACCCTAACCCTAACCCTAACTGTAACCCTTCGTTCCTCTATTACAGAGGAT ATACTCCATCACCTTCCCAATCTCAACCACCTTCTCCTTACTCTTCTTCCTACACCTCTTACGCTGCTGATTCCTACACC GGCGGTTACTATCCCGGTTACTATTCAGGTGCTCCTCCACCGCCACCACCACCTAGGCCTTTCTTTGACCGACCGGGCGG TTATTCCGGGCTCAGCGGGCCATCTGCCCCGCTGGATTATTCCTCCGCCAGCTCCTATGATCCGAAGCCCAGGGGTGCAA AGATGGGCTTGGGTGCCGGGCTTGCTGTTGGCGCGGTTGCCGGGGCTCTGGGCGGGCTTGCTTTGGAAGAAGGGCTGAAA TACGAAGAGGACAGGATCACGGAGAGGGTGGAAAACGGCGTTGCTGCTGCGCGGGACGATTACGGGGATTACCGGGCAGA TTATTGAAATGCTTAAGCTGCAAGGTTTGAAGTTTGAAGGCTAATTAATTCACTCTGCTGATATTCTGGTATATATATAT ATGAATTATATATGATGTATATATTTCAATTTGTGTTGGACTGAATGCATCTATGTTGCTTTATTTTCGCTGGTCTATGA AATGAATGTTTATCTTGTGATGATTTCCTACCTTTGCTCGTTCGAGATTATGAAAATGAAATAAAGTTGGTTTCTCTTTA TTACGGCAAGTGTATGGCTAGGTTGTGTTATGTGTGCTTTCATGATTTTGTTCTTGGAGCAAGAGTTGGAACAGGGCATA TGATTGTTTAACTAGTTTACTTTTCATTTGTCACTGACTTCATGGTTCTATGATTCTTTCCCTTTTTGCATTATTATGCC TAATGGATAGGCCTGCATAGTAGGAATTTGTGGTGCAACATTCGTATATTAATCTGGTTGTGTTGGTTTTTCATCAACTA ACCTACTTAGCAAACTGATATGGCATCTTGCAAGAGTAGCATATTTAAGAAATTTTAGCTCTTCTGATGATTTCCTTATA TACATTGCTTCTCTACTTGAGGTCATCTGGAGCTGTATAGGTACAGCTAATTAAGTTGCTTTTTTTATTTGCTTATTTAC CCAAATCATATTAATGGGAAGATGCAGTGCAGAAACATTCTGAATATTGAGTTTGATTATATCTTGTGTTGCACAAGATG ACGATAGGTTAGACAAGCAAACTATCCAGCTGAAGAGTACTTTTGTGCAGTATCATCAAATATCCGCCATGGCAGTTTCT CATGGCTGTTTTTTGGGTTTCCTCCCTGGCCGATATCCCACCATATGGCCACAATATGCCGCCATATTATGCCATATTCC ACCATTATTTGTCATGTATGGCGGGATTTCGGCTTTCCGCCATGACCCGCCATCCGCAATTAACAACACTGCTTTTGTGT CAATGGTTCTTTCATTAGGACAATATAATGATTGAGTGTACTCCTTGACTTCTTATTTTCCTTTTAATATATTAGCCTCA CTAGTCACATGTTAAGAAATAGCGTCAAATCAAATTTTAAGAATGATCATCTTATATATCTTATATGATAAAAAATCAAT AAGAAAAATAATGATACATGCATGCAAATTATTCTAACTTGGAATGAGACCTTTATTTGAATAATTTTCTTATTAAATTT AAAGTGGAAGTTACGTTAAAAATATAGATCATAAATTTAGCCGGTTTAAACCGTTTCAATAGTACCAGTTTGACCAGTTC TTTCCTTTTTTGAGATGAGCCAGTTTTTCCTTTCAAATGGACATGTTACATGCTTGGGTTCTGATTTAACTGGTCGGATC AGCCTGTGTGTTCAATTTTTAAGACTTAGTTAAGAAATATGTTGTATATATGGTTAGGAAATGGATAAATCTATGGTTTT CTCTGCATGTCGATGTTGAAACTTGATAGACATCGATCATGACACCAATATAATATGGTTTATAGAATAGCTGTATAGGG TACATGACATGCTTCTCTATATTTTTTGCTCTGCCTTCATGTTGCAAACCTTTCTTGAAAGTAAATGATTAGACGTGGCC TTCTAGCATGAACTTGTTTTGTAGAAAACCTGAATCTGCTATTGAAAAAATAAAGAAGGTACAATTGAGGCAAGCAAACA TAATATACACATGTGACGAAGAAGCAAACACCAAAGTTCAGCAGTACATAGCTCATTTATGGTATTGAGCGGGCTTATCA CTTAACCTAATCAAATTATTGCAAGTCTTCCAACACATGTTTTCAGCCACTGCTGCCTTTGGTCCAAACTTGTGAAGTCT TATTTTTTCATGATATTGGAGTTCCACTTCTAGGAAAGGAGTTCTAATGCACTAAAAATCTCTTTATGGAGCAAACATGG TTGCTCTATTATGTCACATGCATAGATTGATAGGAAACAAAGGTGCTTGATCAATTTCTTGATGAACTCTCCTCTTGGCA CAATGTTTTTTAGGTATTAAATTTGTGAAGATTGGTGAAAAGTTGTTTTAATTACTTGATTCTCTTGTGGAAGAGATTGG AGAGGAGCCACTAGTGATTATAGATAGTGGAATCAATTGTGTTTTAATTGGTAAGATGTTGAAAGAGAGAAGACCACACT TAATTCCTTATGCAGCCCATTGCATGGACTTGATACATGAAAATATTTGGAATCTTCCTTTGAAAAAGAAGACAATTTTA AGGGGAGTATCTCGTTGGATTTATCTATAGCCATTCAAACACATTGACCTTGTTGTGGCATTTCACAGCTGCAGAGAATT TGTAAGGCATATGTAGTTTCTAGATTTAGAACATCCTTCTCCACCACCTACACCTTTTCCGTACCTCTTACGCTGATTCA TACACAGGTGGTTACTATCCCGACTACTTCCAGTTCTCCTCCACCACCTCCACCTTTCTTTGACTGACCTAGTGATTGTT ATAATATGCTAGGTCTAGTGAGCCTTCTGGCCCGCTCAAGTATTCCTCTTCTTTGTAAGACCTGACCAAGGGTGGAAAGA TGGGCCTAGGTGCCAGCCTTGCTGTTGGCCCTGTTGCTGTCACAGGGGCTCCGGAAAGGCTTTTGGAGGGGCTGTATTAT GAAGAAGACAGAACCACTGAGGTCAATATGGTGTTTAGGTTAATGCATCTGTATTGCTTTATTTTTGCTGCTCGATGAAG GGAATTTTAGCTTTTGATGATTTCAGAGTGCAGCAAGCCAGCAAGCGTATGGCTAGGTTATAATAGTATGTGACGCAAGC TTTCAGGCTTGTTTTCTCGAGACCCATTTTTTCCAGGTTTTCTCTTGATAGTATTTTTGAAGGCACATGTCCTGATGTCC AGACCAAACTGCATTACAGAACCATAATGAAACTTGAGCTTTATTACATCTTGTGTTGCACAAGATGATTGAGGCAGGCA ATATAGGGGGTAGACAAGCAAATTATCCAGCTACAAAAGTACTTGTGTTAGGGGCTCTATTATTAGGATAATATAGTGGT TCTTGGAGTTACTTATATATTTTGATTTTATTTTCTTCACTGAGAGCTGAATCTAACATTAGTGTTTTTAGTTGGAAGTT CTTTGTAAATCACTTCAATGGTTTGAAGCCTGCTTAAGCACATCAGATTATCAGAATGTTCTGTCAGTTGTGGTTTATTC GTTATCTTTATTATGTCATTTATACAAGGTGGAGGTGGAAAACTAGTGTCAACAACTTATTATTCTTGATACAAAGGTAA TGCTTTATCTTTCTCTACAGTAGACCTCAGTAGCCGTGAAACCATTCCCTCCCCGTTAAAGACCTAGAAGCAAAAGAAAC AGAGGCACATTTGGGTTCCCTTGATCTCAAAATCTTTTACTTGCTTTCAGTGCTAGTAGATTGAGATGTTTTGTCTTTTT CAACATTTTAAACTGATTATCTGGTATAGAAAATTTGTTCATTTTATTATTTGTTTGGTCTAAAATTATATTTATTATTA GAATTGGTATTTTGTCGAAGTGGAGAATTATTCAACTTAAGTGAGGCGTCAAAGTGGTCTTTTGGGTGATAAGAGCAAAA GATGCTTAAGCCATTAGCAAGAATGTTTGATTGTCCTTTCCTTTCAGGCATTCGAAAAATAGTCTTAGAATCACTTTGAC ATGTTGTTAAGATACATCGATGAAGACCACATGGTTTGCAGCATACAGCACATGACATATATACATGTTTGGTTTTCTGT TGCAGCCCAGTTAGCATGCTTTGGAAAGCCAAATTTGGCATTCC
CDS sequence (LotjaGi6g1v0070400.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGACATCATCTCGTCCTCCTCCGTCGAAGTCGGTGGATCTCGACCTCACCATCGTCTCCGCCAAGCATCTCAAGAACGT CAACTGGAAAACCGGCGACCTCAAGCCGTACGTCGTCTTCTGGGTCGACCCCGACCGCCGTCTCGCCACCAAATCCGACG ACTCCGGCAACACCTCCCCCGTCTGGAACGAGCGTTTCACCCTCCCTCTCTCTCACCCCATCACTGACTCCTTTCTCACC CTCGAGATCTTCCACTCCAAACCCTCCGATACCCCCAAACCCCTCGTCGCCACCGTCCGCCTCCTCCTCGCCGACCTCCA CGACCTCCATGATTCCTCCAGCATCCGCAAATTCACCCTCCTCCGCCCCTCCGGCCGCCCCCACGGCAAGATCCACCTCA AGCTCGGCCTCCTTGGTCGCCCCCAACCCCTCGATTACCCCAACCCAAGCTCCAACCCCAACCCTAACCCTAACCCTAAC TGTAACCCTTCGTTCCTCTATTACAGAGGATATACTCCATCACCTTCCCAATCTCAACCACCTTCTCCTTACTCTTCTTC CTACACCTCTTACGCTGCTGATTCCTACACCGGCGGTTACTATCCCGGTTACTATTCAGGTGCTCCTCCACCGCCACCAC CACCTAGGCCTTTCTTTGACCGACCGGGCGGTTATTCCGGGCTCAGCGGGCCATCTGCCCCGCTGGATTATTCCTCCGCC AGCTCCTATGATCCGAAGCCCAGGGGTGCAAAGATGGGCTTGGGTGCCGGGCTTGCTGTTGGCGCGGTTGCCGGGGCTCT GGGCGGGCTTGCTTTGGAAGAAGGGCTGAAATACGAAGAGGACAGGATCACGGAGAGGGTGGAAAACGGCGTTGCTGCTG CGCGGGACGATTACGGGGATTACCGGGCAGATTATTGA
Protein sequence (LotjaGi6g1v0070400.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MTSSRPPPSKSVDLDLTIVSAKHLKNVNWKTGDLKPYVVFWVDPDRRLATKSDDSGNTSPVWNERFTLPLSHPITDSFLT LEIFHSKPSDTPKPLVATVRLLLADLHDLHDSSSIRKFTLLRPSGRPHGKIHLKLGLLGRPQPLDYPNPSSNPNPNPNPN CNPSFLYYRGYTPSPSQSQPPSPYSSSYTSYAADSYTGGYYPGYYSGAPPPPPPPRPFFDRPGGYSGLSGPSAPLDYSSA SSYDPKPRGAKMGLGAGLAVGAVAGALGGLALEEGLKYEEDRITERVENGVAAARDDYGDYRADY
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 251 | 251 | - | – | |
| Gene3D | 4 | 138 | 135 | 3.6E-14 | ||
| SUPERFAMILY | 6 | 141 | 136 | 1.93E-19 | – | |
| PANTHER | 7 | 298 | 292 | 1.1E-108 | – | |
| PANTHER | 7 | 298 | 292 | 1.1E-108 | – | |
| Pfam | 13 | 106 | 94 | 5.2E-12 | ||
| CDD | 13 | 133 | 121 | 1.1119E-28 | – | |
| SMART | 13 | 115 | 103 | 1.6E-9 | ||
| ProSiteProfiles | 14 | 100 | 87 | 9.317 | ||
| MobiDBLite | 138 | 188 | 51 | - | – | |
| MobiDBLite | 146 | 160 | 15 | - | – | |
| MobiDBLite | 161 | 188 | 28 | - | – | |
| MobiDBLite | 207 | 246 | 40 | - | – | |
| Phobius | 252 | 272 | 21 | - | – | |
| Phobius | 273 | 305 | 33 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0070400.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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