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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0077200 |
| Transcript ID | LotjaGi6g1v0077200.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Basic helix-loop-helix transcription factor; TAIR: AT2G40200.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein; Swiss-Prot: sp|Q9XEF0|BH051_ARATH Transcription factor bHLH51; TrEMBL-Plants: tr|I3T555|I3T555_LOTJA Uncharacterized protein; Found in the gene: LotjaGi6g1v0077200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:14629115..14635448) extracted from Lotus japonicus Gifu genome v1.2.
GTTTCGTACTATTTCATATATAGTTCAAACTCTTACTTAGCAGGGATATACTAAGCAATTTTGTTTATTAGCTCCAAGTT CGTTGAATCTCCTCCTTGTAAAGTCCAAGTCCATTAGATTCATTACTGAGACCTTACATTAGATTCAAGAGAAGGGGAAA AAACTTGTTGAAGTGACAGATGGATACAGCCAAAATCAATTTTCATTTTGACTAATCAAAGTTTGATGCTTATCACATCA CACCAAACACCATCAAGATAAAAAGAAGAACACCAATTATTAGTGCAGCAAACAGTAGCTAGGTATGTGAGATAAAAAGC TAACATAGCATGGGAGAAACTTTAGATTAGTTTCCTTGTGACTATGGAAAATTACTATCACTCTGGCTGCCATAGCTATG CTCATTCTCCCTTTCCAGTGCCTCCTCATATCTCTGCCTCTCTTCAATTTAGTGAGTTCCACTCATGGTCTGAACCCATT GAAGGAGCTTCAGAAGAGAGAAGAATAAGTGCTTCCAAAAGTCACAGTCAAGCAGAGAAACGGCGCAGGGATAGGATCAA TGCACAACTTGCAACTCTCAGAAAACTGATTCCTAAGTCTGACAAGGTAAACAAATTTTAATGTGACTATTCTCATGGAT TGCACACAGGTTTTAAATTGCGATCGCGGTTGCTGCTGTGTTGCAAAATTTCGGTCAAATGCGGGTTGATGTTGCAGCCG ACCGCAATTTGAAACCTTATTAACTCATTACCCTTTAAAGCCTGGATCTTCTTCCAGTAATCAAGCAATAAAATGGAATC ATACACTCAGGAAAATAAGGATATAGCATTTTAATATTTCCCTTTTCATGGATGACAAACTTTCTAGTATTTTCATTTGT ACAATGAAGTGTGAACAATCTGGGAACAATTTGGATGTTGTTCCTGGGCATCACACAAGTCTTCTATCGAATTTGGAAGT GACATGACATGGTATGCTTACCAAAGTCATATAAGGAACTCAATTCTACTTGCCCCCTCTTAATTCATGTTTGAAAATTC TTCTACAATTGATTCTAAAAGCTAAATTCAGTTTTGTAGCGAAACTTGTGTGAGTAGATTCCGAGTATGAGGATGGATTC GGAGAAAAATAGGCATTGATCCAAACATACTATTAATGAGGGCGATCGTATTGGATGAAGCTTAGTGGGTGTGTATAACA TACTAACATATGTGTTCTTGCAGATGGACAAGGCAGCTTTACTAGGGAGTGTGATAGATAAAGTTAAAGATCTAAAGCGA AAAGCAATGGAAGTTAGCAGAGTGTACACAGTTCCAACTGAAATTGATGAAGTAACAATTGACTATGACCATGTTCAAGA TGAAAGCTGCACCAAAGTGAACAAATGCAAGGACAATATCGTCATCAAAGCTTCTGTTTGTTGTGATGATAGACCAGAAT TGTTCTCTGAACTCATCCAAGCATTTAAAGGATTGAGACTCACAGCAGTTAAAGCTGACATAGCCAGTGTTGGTGGAAGG ATTAAGAGCATATTAGTGCTTTATTCCAAGGATACTGCAGAAAATGTTTGCCTCAGCACTCTCAAACAGTCCCTTAAATC AGCAGTCACCAAAATTGCTGGATCTAATTGTCCCACTAGAAGTAAGAGGCAAAGATTCTTCATACCTTCTCATTTCTTAC AGTAATTTACTGAAAAATCATTTTATCATCCCCTTTTATTCCTTAGGAAGGTCAATTCAGTGGGGGAAATTATTTGCCTT ATTTTTCAATGTTTATATAGCTTTTTAGATACTTAGTTTGTACATTAGGAAGCTGAGATAATGGTTTGGTGCCACTAATT AAGGCAAAGTTTAAATAGTTGGAAACTGAAGAAGCAAAGCAAAGCACGGTTAAATATAGAAACCAGTCTGCTTTGTTAAT TCCAGGGTTAAATTTTTCAGAATCATTTCTTTCCACAAAAGCTGTTATTAGTAGTTTTTTTTCAAAATTATTTCTACCCA GCATAAAAGACTTTTCAAACACATACATAGCAACTTAATTTGATTTAGATATATAGAAAGAGATAGTGAATTAGAATAAC TTCATGTCACCTCACATAATATCAAGTGAAACATTGTATCTATTTATTTCTTTGTAATCTAAAGAATATTACATATTTAA TATATATACAGTGTTATTCTACACTCTACATAGGATTTCAATTTTGTTCTTAAACTCATGTCCTCCTTTCATAGTTTCTA TTTACTAATCCTCTAATCGCTGGTTCCCACTGGCTACAGTAGTTAGTTTAACTCTATCCTCTACAAGTAGGATTTAGATT TTGCTCTCTTACCGATGTCCTGCTCCATTGTAAAAGCTCCCAAGAAAGAGACATAAAAGCAAACACAAATGAGCGGATAT AAGAGATTAGGAAGAGTCGTGGCTATTTTTATTTTATTTTTGCTCTCTCCAATATTGTTAGTTTACCAAGACGTAAGGCC AAACAACTACAAATCTGTCAATTTTTCTTTATATTTTATCCAATAGATTTATTATACAATACCGTACTAAGACGCAAGAC AAATACGCTGATGCTCGATGGCTAAACATGATCAAGTAACATACATTACAATCACGCAAACTTGCACGTTATCAAATACG TACTAGAATGCAAGACCAATCTACGGACCAAACATGCACATAAATTTCGGGTAAATAGATATCAACAAGAGGCCCATTCA AACACTAATCAATAACGCAGTCAAGTAATGACTCGACAAATTTGCATTCCTACAAAATATGAATCATTTGGATTTAGCCT ACTCAGTGCAATCCGACCCAATACATAAAAATACCTTTGCTTTTCCTCATTTGAATCCATGACATCTTAATAATTCTAAA TCAACCCTAAATCTAATTTCAGCACCCGACTTTAACTATATCAACCAGAAGTCACTCCAAAGAGTACTATTTTTAAACCA CTCATAAGCCATTCATATAATAATGACAGGAAAGACTTGCATTCTTATGAAGTATGAATCATTCATAATAACCTTTCTAA GTACAACCCAACCAAATACATAAAATTACATTTAATTTTCCTAATTTGAACCTAAACCCTATCAACACTACCGATTGATA ACACATTCAATAACAATGGGCAGGTTTGCATTTCATGAAGTGTGGATGAGTATAAAAAAATGCAACTAAGGTAATCCAAC CCAATACATGAATTTACATCACTTTGTGAACAACTATACTAAAACAAATTTGGACATGTTTAGTCTACAATCTGTGAAAC AAGGTAGCAACTCGAGCATAGAAACTACAGTCATTGTACTATGCTATGTACCAACATGTTATAAGACTCCAACCCTTTTT CATAGGGGCACTGCACCACCAGCATGTGCAGTAAAAGTACATCAATGGTTCAATCCTAAAGGAACACTGATATATTGTAA CAAGATTAACTAAAAGAGCATTATTCATAGTCCCTATTTATGAGTTAAATTATGGATAGAAGAGAAGGGGCAAGAGTTTG GGAATTTCTAAAATCTGAGGTTTTTGAAATTTTAAACTTCCAAACAAGAAGGCTTACACTCGCTTCGCCCATCTCTTCGC CTACCCATCACCTTCCACTCAAAGCGACATCCTTGTTTGGAAAATCCAAACTTCACAAAAAACCAAGAACTCAACAAATA ACTATAGAATGGTCTTGAATGGTTCAGAAATTGTCCAAACCAATCACTCTTTAAATAAATCTCCCAAACAAGGTTTTCCC CATTCCCTCACCTCAAAAATCCATTTGACAATCAAATCCTAAGAGCTGGGTTTCAAATTTCACAATAGCCCAAGTTAATA ATGAATGTGGAAAACTTCCATTCCATGACTACATGGAGACAACCAACAAGAAATGAGGAAAAATGAAATGGTCTTAGCTA GAACATTCAAATGGCATTTAACATCCTTAACAACTAAACAAAACACCAAAAACGTCTTTCATATCCAAAGGGACCATATT TCAGATCTTAAACTAGACGCACCACCCATCTACTTTAATCAGAATACATAATTTCATAGCAACCAAAATTGTTCTGATCA ATGAAATCAAACAGGGGGTGGAATAATTAGTGTTGCAAGTGATTATTTCTTCACAAAAATTTCGCATATAATCACCAAAC AGAGATAAAAGCGAGAGCAAAACCCAAGAGAGCAAAGAGAATTAAAGCTTGAACTACCATTAAACCGATAGAATCCAACA ACAAAATTGTACCATAACACTGAGAGAAAAACCGATACTACTCTCTTCAAGTCTCAACAAAATAACAAACAAAAACAAAC TGGGGAGGAAACAAAATCTAGAAGCGATGATTATCGTCGAGAGAAGACACAAACTACTTGGATCTCTGTCTCATCTTTCG GCGCTTCCTCTTCAACCTCCTCATACGCTTCTTCTTCCACTGCACAAATCAACAATCCCAATCAGAACAACAGCAACAAG GAAAAACCAGAAGAGAAAACAACGATAAAGAAAGAGCCCGTTACCTTGGCTCTCATGGTGATCGAGGACGGAAGCGAAGC GAAGAAACCAAACCCTAGTTGAAGAAAAACGAGAGCTGCGGTGAGGTAACAGAGATTGGGAAAATTGGAGGCTACGTTTC AGCAATTTATATAGCGAACTATAAACCCTAGAAAATTATGGTGAGTCAGTGGGTTTCAAGTTTCAACCTACGAATGAAAT GAGGATGGGCCAGCCCATTAGATTTTTTAATCTATTTCATACATAGCCCAAAAACAAAGAGAGAGATTTCAGAAGAGTTT TCTTTAAGCAAAACAAAAAAGTTTTCAACCAAAAAACACAAATATGTTGTAAGAGATTTGTCCTCGAATGATAGCTCAAA TGGTAAGAGTTAAGAGAGATATGAGTTGGGTGGAAGAGATCTACGGGTCGATTCCTGAAGGGTGTAAATTATCGGAGTAC CAAAAAATGTTGTAAGAGATTTTTGTTAAATGTATTTTACTTTAAAATTGTTATCTATATACTTTAGAAAAGAGGAAGGT TGTGAGACCCACCTTGCTGATTTGGCACTCCAAGAATTACTCGCACCAAACCTCCCTCTTTGTCTAACAAGTGTCAATGT CTTATTGATTTGGACCTAAACATTGCAAAGCCTATATTCATTTCAGTTTTGTATGGAGGCCCGAAAGCTTATTGAATGCT GATTTTTTATTATTTTTTTAGCTATTCATTAATTCCTAACATAAAATATCCACATTAATGGCTAATTAACATTTTGACTA TTTCAACTATTTAATTACAAATAATTTTTGTTTTGCACCACAAGATCCACGTGTTTAAATAGAATTACCATTTTTTAAAA ATATTCGAATAGTTTCGAATTTCCTATAATTACTCATTACCTGTGCGAGGACCTTCGACAACGCGTTTCTCAGTTAAATA ACGCCTTTCCTATAATTAATCATTTCCATAAATGAGAAATATTGACCTATCATTCATAATAATTATAAGTGAACCGTGCG TTTGTAATATTTTAATAAATGAAATCACTTATTTAATATCATGATTTGTAACGCACGGGGTAATATTTTAATATCATGAT TGATACATTCCATTCTTATGAAGAAAAAATTATCTTTGAATTAATTGAATTTCCTATTTTGAGTAGTAAATCACCTCATG CTATTAAATGTCATTATAAGCGTAGCGCCGGCTAATTTCAAATACCATGCATAATATTACCCTAATTTTCCTTCCTTTTT TAACTTACATTGAGAAGTAACCCTAATTCTGAAATTTCTATATAAATCACCTCATGCTATTCTTCAACTTTATCAATCCT TCCATTTCCCACCAACTATTAGCTTTAAAAATTCTGAATATTACCCATCAACCACTCATCTTTTTGAACTCAACTTTCGG GAGGATATCCTTCCATTTCCCACCAACTATTAGCTTTAAAAATTATGAATATTACCCATCAACCACTCATCTTTTTGAAC TCAACTTTCGGGAGGATATGTCCATTATCGGTGAGTCTTTGTTAATTATTTTGTAGTTATATTATTCGCACTATATTAAC AATTTATGATAAAATTACCCAGGTACCTCGACCACTAAAATTGTTCAACGGAAAAATATATTTTTTATGAGAATTTTTTT TAGTCTATTTTGTAATGTTTTTTTTTTACTGATGTAGGAAATTCCAATAGATATATATGTGCTGGAATGGAGCCAACCAG AATTTTGTATCGACCAACTCTTTGAAGAACCTCTCATGATCAAGTAGCGCTCCTAGCTATCGTCTGAACGTGAACAAAAT AACTGCACTTATTT
CDS sequence (LotjaGi6g1v0077200.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGAAAATTACTATCACTCTGGCTGCCATAGCTATGCTCATTCTCCCTTTCCAGTGCCTCCTCATATCTCTGCCTCTCT TCAATTTAGTGAGTTCCACTCATGGTCTGAACCCATTGAAGGAGCTTCAGAAGAGAGAAGAATAAGTGCTTCCAAAAGTC ACAGTCAAGCAGAGAAACGGCGCAGGGATAGGATCAATGCACAACTTGCAACTCTCAGAAAACTGATTCCTAAGTCTGAC AAGATGGACAAGGCAGCTTTACTAGGGAGTGTGATAGATAAAGTTAAAGATCTAAAGCGAAAAGCAATGGAAGTTAGCAG AGTGTACACAGTTCCAACTGAAATTGATGAAGTAACAATTGACTATGACCATGTTCAAGATGAAAGCTGCACCAAAGTGA ACAAATGCAAGGACAATATCGTCATCAAAGCTTCTGTTTGTTGTGATGATAGACCAGAATTGTTCTCTGAACTCATCCAA GCATTTAAAGGATTGAGACTCACAGCAGTTAAAGCTGACATAGCCAGTGTTGGTGGAAGGATTAAGAGCATATTAGTGCT TTATTCCAAGGATACTGCAGAAAATGTTTGCCTCAGCACTCTCAAACAGTCCCTTAAATCAGCAGTCACCAAAATTGCTG GATCTAATTGTCCCACTAGAAGAAATTCCAATAGATATATATGTGCTGGAATGGAGCCAACCAGAATTTTGTATCGACCA ACTCTTTGA
Protein sequence (LotjaGi6g1v0077200.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MENYYHSGCHSYAHSPFPVPPHISASLQFSEFHSWSEPIEGASEERRISASKSHSQAEKRRRDRINAQLATLRKLIPKSD KMDKAALLGSVIDKVKDLKRKAMEVSRVYTVPTEIDEVTIDYDHVQDESCTKVNKCKDNIVIKASVCCDDRPELFSELIQ AFKGLRLTAVKADIASVGGRIKSILVLYSKDTAENVCLSTLKQSLKSAVTKIAGSNCPTRRNSNRYICAGMEPTRILYRP TL
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 14 | 216 | 203 | 1.1E-89 | – | |
| PANTHER | 14 | 216 | 203 | 1.1E-89 | – | |
| Gene3D | 40 | 99 | 60 | 7.5E-15 | ||
| MobiDBLite | 43 | 63 | 21 | - | – | |
| CDD | 43 | 101 | 59 | 9.00027E-10 | ||
| ProSiteProfiles | 49 | 98 | 50 | 14.723 | ||
| SUPERFAMILY | 50 | 106 | 57 | 1.83E-12 | ||
| Pfam | 52 | 98 | 47 | 1.1E-10 | ||
| SMART | 55 | 104 | 50 | 2.9E-10 | ||
| CDD | 145 | 180 | 36 | 6.94285E-5 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein dimerization activity | The formation of a protein dimer, a macromolecular structure consists of two noncovalently associated identical or nonidentical subunits. |
Expression pattern of LotjaGi6g1v0077200.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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