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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0082800 |
| Transcript ID | LotjaGi6g1v0082800.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | BTB/POZ domain-containing protein; TAIR: AT3G56230.1 BTB/POZ domain-containing protein; Swiss-Prot: sp|Q9LYL9|Y3623_ARATH BTB/POZ domain-containing protein At3g56230; TrEMBL-Plants: tr|A0A0B2P690|A0A0B2P690_GLYSO BTB/POZ domain-containing protein; Found in the gene: LotjaGi6g1v0082800 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:16144625..16148959) extracted from Lotus japonicus Gifu genome v1.2.
CAACTTCCTAATTTTCCAGTAAACACCCCTCTAGACCCCCTCATCTATATGGAAAGAGATAGAAACTATTTGCTAAGTAC ACCAACAACCTATCTCCTTCTTTACATACTTTCCTCCACTTCTTTATTATACAATAATCATGAAACAGAAAAGGATTGCA CATCTACAAATTGTTATGAGGTTACATCCACCCTATCATTCACTTTAAACTATAAAATATACATAGAGCTAATGATGTAT CTCTTCTAATAAAATTAAATAGACATGAGACTGGAATCATTTATAATAGGGTCCAATTAAAGGAACATATTTTATGAGGA ATGAACGTGGATGGCAACTATTTATGGATAGCAAGGTCAGAACTTAGAAGAAGCAAGTGTCTCCTTCATCTCCTTCTTCA TCTTTCTGTGATTTTAGAGAGCAGAGGAGGGAAATTAACTAAGGGGCAGAGACATGGATTGTTGTGTCTGCACAACCATG CCATTGATATTAAGGCCTCCAAGGAATACAATATGCGGGTCTTGTTATGAAGGGGTTAGGAGTATAATCGATATTATGCA CAATCTCGAAAGTGAGAAGGCAAAAGCAATCACCAACCCAAACGATTCTCCAGTTTCAAAGCGAAATTCTAGTAAGGCAA GCTATAATTCTTTTCATAATTCATATGCCTGATATTTCATAAAAAATTATGTAGAGTTCATGTTTCCTCTCTCTCTCTGG CTCCCATGTTTGCATAATATCTTGCTTATTTTTAGTAATTTATATAATAACCAATGTGCCTCATGTAGTTGATTACGTTT TACAATTGGCATCACTAACTAGTAATTTTGTTCTACAAGTCATGTTTGCTCCTTAGATCGGAATCGAATTGTTTATTAGT GTATTAAATTGTTCTCACAATTTTGAGTCACGTAGGATTACTTTGAGCGGCAAAACTCAGGGCTCGTTTGGCACGCCGTA TTAGGCATGATAGTATAAGCTTATACAATACATTATGAGTTTATTCATTGTTTGGTGATGACATTGTATTGTATAAGCTT ATCCATCAAAGTCCCTTTATACGTTAAAATGACGTATTATTTAATCCATCATGTGAGTGATGAACAAGGCATGATAAGGT TGTGACGTATAAGTCACCATCACCACCACCCTCCATTGCTACCAACTTACACCATCATTGGCCCCACCGCCGCCACCGGT GTTGCCGCCACCACCCGATCACCACCGCCGCCGCCACCACCGCCCTACCGTAACCCCTGGTGTTGCCGCCACCACCACCA CCGACACCACAACCACCACCCTATCGCCACAACCACCACCATTGCCTCCACCGTCGTCGCCACCCTACTGCAGCCGCCAC CGCCACCGCCTTACCACCACCACCCTATCGTCGCCAACACCACAACCACCATCGCCGCCACCACCCGATCACCACCAACG CCCTACCGCCACCACCGACACCACAACCACCAACCTATCGCCACCACCACCATAATCGTCGCCACCACTCTATTGCCACC ACCGCCACCACCGATACCACAACCACCACCCTATCGCCACCACCACCACCATTACCTCCACCCTCCACCGTAGCCGCCAC CCTATCACAACGGCCACCGCCTTACCACCACCACCACCACCCTATCATCGCCACCACCACAACAATCATCGCTGCCACCA CAACCACCAACCTATCTCCACTGTCACCACCACCGCCACCAACACCAACCTACCACCATTGCCACCACCACCACCAACCT ACCACCACTTCCATCACAACCGCCAACACCGTTATAATCACCTCCATATTCGATTTTTATTATATATCATTATTCAATAC TTCACTAAACATAAAATTGCATTAATTTAAACGATATGGTAAATTATACAGAGTATGGCCAAACGCTAGATAGTATAAGA AAGTTATCAGGGCTTATACTATCAGGTCTAATACTATCAGGTCTTATACTATCAGGCTTTATACTATACGTCGCACCAAA CGGACCCTCAATCTACGAAGTATTTATCTATGCTTAAGTTAAACAATCTCGTCTCAGTTAATCTAGGCACTTTATCTGCC ACATTAGCTGCTAAATAATGGAGATAGTCTTACATAGATAAAATAATTATATTTAATCTAATTTTGCATCCCTCCATTAT ATTTCTAACTTCGAAAATCAAACTTGTTCTGTGGTTTCTCATAGATAAGATTTTAAGGCATGATTTGACCTTTTACGGTC ACATATATTAATCTTAATCTGCTTACAAGTCTATTTAACAGAAAATGTCATTTTAAAAAGATAAATAAATCAGCGGGCAA TGGGTCGCTTTTATATTTGTTGTATCCTGTTAAGTTTTGCTGTTACCCTGTTATATTTGCTTTCAATTGAGTTCAGACAC ACATGCTTCCCCTGTTATATGTTGCTATTGCTGGTGTAGCTTAGCTATATATAACTGAATTGGCAATGGCAGAACTATTA ATTGTATGGATACTTTTGTTTGAATTATTTGTTTTCTTTCAAATTCAGTTGTGGCTCAATTTGTATGGATATGGCAGAGT GCTACCTTTCCATTGATTGTGATTAAAAAAATGCCTTTGGATGCTATGGCATTAATAAGATATTTTTCCTCCATAGGCCA TTGAGGATAATGCAAGACGGTGGTTTGATCATATAAACCTCTGTAATCAACAAAAAGAAGAGTTGGCTTTCCTCAGAGGC TTTGTTGCTGCATTCAAGGAACAGATTCACACTGATATACTGGTCAATCCAGGCAACAATGGTCCACCTATACCTGCACA TAAATCCGTTTTGGTGAGTTATTTTTGTTTTGCCCACTAAATATTTTCCATAATTATTAAAACAATAAAGATTGGTGGGC GTACACGGTACACCACTAGAGAGTTAAGAAAAGAGGAAAGATAAGTGATAAATGTGATACATTATGAATTGATCGAAAAA ATGAGAGGGGGAGAAAATGTGTTCCACATTGTTTGCATTGTTTTGTGGTACAAGTATCATTACTCAAGTTAAAATCATTC ATAAAGTTTTTGGGGGTGTGAACTTACAACCTCATACAACAAAATCATTCCAAAATCATTGGTGATAGGTTGCTAAGGAA ACTTTTAACTACAATAGCCTTAATTAAATTTTTGGTCCTATAGTTTCATAAAACGTGATTTTAGTTTTTTATTTTCAATT GCTCAAATTAAGTTTCTCTTCTTTCAAAATTAAACAAATTTGGTTCAATTGTAATGAAAAAATTGACATGTATCACTTTT TTTTTATCCACATAAATCGTCTTATATTGTAATTCATGTAAATAATTTGTGATGGACATCTACTTTTTTTCATTTTTTTC CTTAATTATTGGATGATAATTTAACGTTTGAACTCAATTTGTTCAATTTTAGAAGTAAAGAGATTTAATTTGAGCAGCTG AGGCTAATGACCAAAGTCACAAATTTCTAAAATTATGAGGACTAAAAGTTAATTAAGCCTTTGAAATATGAATTAATTAA TTCTTGTTTCATGTAAAATTATATATGCATAATTCTAACGAGGCTATATACACATGTTATTCTGTTGTAGGCAGCGAGAT CAGAAATTTTCAAGAACATGCTAGAATGTGACCAATGCAAAGCTTCACCTAATAATAACACCATAACAATACCCGATTTG AACCATGATGAACTAGAGTCTCTCTTGGAGTTTCTGTACAGTGGAACCATGGCTTCAGAAAAATTGGAGAAACATGTGTA TGCATTGTCACAAGCAGCTGATAAGTATGATATCCCACACTTGCTCAAAAAGTGTGAGATATATCTGCTAAGTTCACTTA GCACCTCTAATGCACTTGAAACGCTAGAGATTGCTGATACTTGTTCTAACAACAAGTTGAAGGAGACAACCTTGGATTTC TTAGTTAAGAACATTGAGCATGTCGTGTCCTCCGCTAAATTTGAAGCTTTTGTACATCGGAGTCCGCAGTTAACTGTGGA GCTAGTTACTAGGGCATTTGTGAACGGTGCCAAATCATCAATATCTCCCCAAGTTTAAAGAGGCACGATTATTTAATTCT TTCAATTTCGTATGTATTTATCAAGACCTATTGATTGAGATCTTCAACAAGTACAAAGTAATTCATACTTTGATCTCTTT TGTAACCAGATCTCCCATTTTATTTTCTTTTGAGTTGTAGTTTCAATTAGGGTGCGCTTGTATAAAATTTAATTAAACGC TTGATTATGTCAATAATCCCCTATCATGTAAGCATGTGTTTATAAGTTCTATTTAACAAATTGAAATAAGCTTTTAGTTT ATTTTGTGCCTAAAT
CDS sequence (LotjaGi6g1v0082800.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGCTAGAATGTGACCAATGCAAAGCTTCACCTAATAATAACACCATAACAATACCCGATTTGAACCATGATGAACTAGA GTCTCTCTTGGAGTTTCTGTACAGTGGAACCATGGCTTCAGAAAAATTGGAGAAACATGTGTATGCATTGTCACAAGCAG CTGATAAGTATGATATCCCACACTTGCTCAAAAAGTGTGAGATATATCTGCTAAGTTCACTTAGCACCTCTAATGCACTT GAAACGCTAGAGATTGCTGATACTTGTTCTAACAACAAGTTGAAGGAGACAACCTTGGATTTCTTAGTTAAGAACATTGA GCATGTCGTGTCCTCCGCTAAATTTGAAGCTTTTGTACATCGGAGTCCGCAGTTAACTGTGGAGCTAGTTACTAGGGCAT TTGTGAACGGTGCCAAATCATCAATATCTCCCCAAGTTTAA
Protein sequence (LotjaGi6g1v0082800.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MLECDQCKASPNNNTITIPDLNHDELESLLEFLYSGTMASEKLEKHVYALSQAADKYDIPHLLKKCEIYLLSSLSTSNAL ETLEIADTCSNNKLKETTLDFLVKNIEHVVSSAKFEAFVHRSPQLTVELVTRAFVNGAKSSISPQV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 139 | 139 | 2.8E-55 | – | |
| Gene3D | 1 | 75 | 75 | 2.8E-11 | – | |
| Pfam | 12 | 73 | 62 | 3.7E-11 | ||
| SUPERFAMILY | 12 | 73 | 62 | 1.77E-9 | ||
| CDD | 13 | 74 | 62 | 4.11182E-7 | – | |
| CDD | 74 | 144 | 71 | 6.26545E-6 | – | |
| Gene3D | 76 | 145 | 70 | 4.6E-13 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
| GO term | Namespace | Name | Definition | Relationships |
|---|---|---|---|---|
| Molecular function | Protein binding | Interacting selectively and non-covalently with any protein or protein complex (a complex of two or more proteins that may include other nonprotein molecules). |
Expression pattern of LotjaGi6g1v0082800.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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