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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0095200 |
| Transcript ID | LotjaGi6g1v0095200.2 |
| Related isoforms 2 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | O-fucosyltransferase family protein; TAIR: AT3G26370.1 O-fucosyltransferase family protein; Swiss-Prot: sp|Q8W486|Y1491_ARATH Uncharacterized protein At1g04910; TrEMBL-Plants: tr|A0A1J7HDE7|A0A1J7HDE7_LUPAN Uncharacterized protein; Found in the gene: LotjaGi6g1v0095200 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:20542523..20543602) extracted from Lotus japonicus Gifu genome v1.2.
GTAAACAGGGCTCTGCATCTTAGATTCGAGAAAGGAATGGTGGGTCTATCATTCTGTGATTTTGTGGGGACAAGAGAGGA GAAAGCTAAGATGGCAGAGTATAGAAAAAAGGAGTGGCCTCGACGGTACAAGGTGCTGTACTTCTATTTTTTATTTTAAA CCAAAATGAGCACTAAGAAGCTTCTACTGAGGCATTTTGGTCCCATTATCTTTGCTGAAAATGCAGAATGGTTCCCACCT TTGGCAATTGGCTCTGCAAAAGCGGAAGGAGGGACGATGTCCTCTAGAGCCTGCAGAAGTGGCTGTTATTCTTCGGGCTA TGGGCTACCCAAAGGAAACTCAAATTTATGTAGCTTCTGGGCAAGTGTATGGTGGACAGAACCGGATGGCACCGCTCAGG AATATGTTCCCTAATCTGGTAAGACCTCTCATACGAGGTGCATTATAAAAATGAGCAGCCTTGATGTTCTAAAAGGATTT TGATGCTTTTTCTAAGTAAATATCACACCGATTGATTATCTAGTAATGCATGACAATGAGATTCGAACGGAAGTTAATGC TAATCATTAAGCAGTTATGATGTCATGTTCTCTATCTCTCTGTAATTTTTGTATCATGCTGTCACTGATTTAATATACTA AATCTGTTCATCTATAACTTTCCAACAGATTCCTTAGATTCTTTTACAACGTAATGGATCTTTTTCACTTCTTGTAATAG GTCACAAAGGAGGAGTTGGCAACTAAAGATGAATTAGATGGTTTCAGAAAGCATGTAACAAGCCTTGCAGCTCTTGACTT CTTGGTGTGCTTGAAATCAGATGTATTCGTGATGACCCATGGAGGCAACTTTGCTAAGTTGATCATTGGTGCCCGGAGAT ACATGGGTCACCGTCTAAAATCAATTAAACCTGACAAAGGACTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGG GCTACTTTTGTAGAAGATGTAGTCGTTACTCACCAGACGCGGACGGGATTGCCGGAAGAGACTTTCCCTAACTATGACCT ATGGGAGAACCCTCTGACTCCTTGCATGTGTAAAGCCTAA
CDS sequence (LotjaGi6g1v0095200.2) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGTGGGTCTATCATTCTGTGATTTTGTGGGGACAAGAGAGGAGAAAGCTAAGATGGCAGAGTATAGAAAAAAGGAGTG GCCTCGACGGTACAAGAATGGTTCCCACCTTTGGCAATTGGCTCTGCAAAAGCGGAAGGAGGGACGATGTCCTCTAGAGC CTGCAGAAGTGGCTGTTATTCTTCGGGCTATGGGCTACCCAAAGGAAACTCAAATTTATGTAGCTTCTGGGCAAGTGTAT GGTGGACAGAACCGGATGGCACCGCTCAGGAATATGTTCCCTAATCTGGTCACAAAGGAGGAGTTGGCAACTAAAGATGA ATTAGATGGTTTCAGAAAGCATGTAACAAGCCTTGCAGCTCTTGACTTCTTGGTGTGCTTGAAATCAGATGTATTCGTGA TGACCCATGGAGGCAACTTTGCTAAGTTGATCATTGGTGCCCGGAGATACATGGGTCACCGTCTAAAATCAATTAAACCT GACAAAGGACTAATGTCCAAGTCTTTTGGGGATCCATACATGGGTTGGGCTACTTTTGTAGAAGATGTAGTCGTTACTCA CCAGACGCGGACGGGATTGCCGGAAGAGACTTTCCCTAACTATGACCTATGGGAGAACCCTCTGACTCCTTGCATGTGTA AAGCCTAA
Protein sequence (LotjaGi6g1v0095200.2) extracted from Lotus japonicus Gifu v1.2 Proteins.
MVGLSFCDFVGTREEKAKMAEYRKKEWPRRYKNGSHLWQLALQKRKEGRCPLEPAEVAVILRAMGYPKETQIYVASGQVY GGQNRMAPLRNMFPNLVTKEELATKDELDGFRKHVTSLAALDFLVCLKSDVFVMTHGGNFAKLIIGARRYMGHRLKSIKP DKGLMSKSFGDPYMGWATFVEDVVVTHQTRTGLPEETFPNYDLWENPLTPCMCKA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 215 | 215 | 9.3E-147 | – | |
| PANTHER | 1 | 215 | 215 | 9.3E-147 | – | |
| Pfam | 6 | 151 | 146 | 2.8E-28 | ||
| Gene3D | 8 | 159 | 152 | 2.5E-7 | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0095200.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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