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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0104700 |
| Transcript ID | LotjaGi6g1v0104700.1 |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Phosphatidate cytidylyltransferase; TAIR: AT2G45150.3 cytidinediphosphate diacylglycerol synthase 4; Swiss-Prot: sp|Q94A03|CDS4_ARATH Phosphatidate cytidylyltransferase 4, chloroplastic; TrEMBL-Plants: tr|A0A151UA65|A0A151UA65_CAJCA Phosphatidate cytidylyltransferase; Found in the gene: LotjaGi6g1v0104700 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:23029281..23036155) extracted from Lotus japonicus Gifu genome v1.2.
ACCAAACAAAGACCAGTGTAATCGTCCAAAAAAAAACCCAACCCCAAAAATCATCGTACATTCTTGTTATTGTACATTTG TATATTCCTCTTCTTCTTCGTCTGTCAACTCGGTCGGTGTCAGCTGGAATGGCTCACCCTCAACTCAGTAACTCGCTCTC TCTCCATCCCAATCTCATTCCCCTTTATCGCCCCCTCCACCACCATCACCCTCCTTCCCCATTCCCTTCACTCTTCACCA AACCCAAACCCCTCCTCCGGTTCACCCGCCGAACCGCCGAACCGGTTCAACCCCGTTTCCTCGTCGCCGCCGTCGGTCAA GCCGAGCCGGAACGCCTTCCTCAACTCAATGCCCAACAGGTACTCTCTCTAGAGTCAGGACCATTCAATTCAATTCAATG GTTAGAGGAATAAATCATTTTTAAAATCTTGATTATCTATGATGAAGAGTTAATTAGGTCAATTAAGTGTTGAATTTGGG GGCTTTATGAAGCATTTAGCTAGAGTTGTTGTGTAATTTGGAAATGAAAATGTTAATTGTTACTAAAACTTTCCAGTGTC TAAAAATTGGTCCTTCAATTTCAATAGGGTGAGCTTGTTAGCTAGTTGGTAAGTTGAAGGACTGAAGCTACTTTACTAAC AAGATCAAATTGTAATTTACTTCATGACTTAAAAGCGTGATGAAATGATGAACTTTGAAATTTATTGAATTGTAATTTAA TGGTGATGAGTTGCTTTTTTTTTTTTAACTAAAAGGGTTGAGCTTTGAAGAACCAGTGAGAAATTATGTTGGTCGATACA TTTGCATTTTTTATTTTTTACTGTTTCTGAGCATGCATTTGTGGCAGAAGATAGTCACTAAGTTGGCGCTCCTAAGGAGT TAATGGAAGCCATGGTTTGCCCTTGTAGGAGGATTTTCTCTCAAAATCTCCGCAACAAGTTAGTCAATTAAAGAACAGAG TTGTTTTTGGACTTGGCATTGGGATTTCTGTGGGTGGTATCGTTTTGGCTGGAGGATGGGTTTTCGCAGCTGCCTTGTCT GCTGCTGTCTTTGCTGGCGCACGCGAATACTTTGAATTGGTCCGGAGCAATGGAATTACAGAAGGAATGACACCACCTCC ACGCTATGTGTCACGAGTCTGCTCGGTCATTTGTGCCTTAATGCCATTGTTTGTCATGTAAGATTGGTTAGTGTCCCTTA ATTTTCCATGAGTGCTTAGTGCTTACATCTGACAATCTCTTGTATATATTGCAATTTGCCAATTGCAGCCATTATCATTT GACAATGAAAGTTTAGCAATATTTGTTTTACATGTTAATTACATTGTATGTACCACGTAGAAATGACCCAATCTTAAGGG GTTAATCTGTATTTTACCCTAATTTATAAATTTGCTTTACTTTTATATGTATGATTGTATGATGAGAAGGCTTGTGTAGG GAACATCTAAACTACCTTCATACTTTCATAAATTCAGACGTGGAGTGTTAGTGATGTCTGTTGCTGATTGATTAGTATTT CTGATAAATGCTAGGTATCGTGGTCATATTGATGTTTCTGTGACTTCTGCTGCTTTTGTTTTGGCCATGACATTACTCTT ACAAAAAGGAAGTCCCCGTTTTGCACAGCTAAGTAGTGCCATCTTTGGGCTATTTTATTGTGGATATCTTCCCTGCTTTT GGGTTAAGCTTCGATGTGGTTTAGCAGCTCCAGCCATGAACACGAGTAAGTAGCCTTTTAATTCTCTTTCAACTTATAGG TCCGCTCATTGCGGGGCTGGGGAGGGTAAGGTATATTTGTATATATAATCAATGAAAAAGTTACTAAAGTCAATGTATCT TTCTGTAGTTACCTTTTTGAATAATAACCTTAGTTTCAGTATATTTTTCACAAAAATTAATCACTATGCTACTTATAGGA TCTCCCATTACATTTTTTCTAAACAATATTCTGATTGTTATTCCTCTACTGTGCATTGTTTCAGAAGGTCTTCAAATTTT TTTCCGAATAATGTCATGCCAGATTGCCACTTATTTGTTTACTTTTTAATGTCTTGAAATTAGAGTATTGCTGTTTTGGA TATTCGCTAAATTCTGCACATTTTATTGAGCATCTTTCAGTGTTATCAAATAGCGGTTATAACGGCGCTATGCCTAGCGC CGTTATAACGTAGCGGATTTTAGGGCTGGCGCGATCGCGACGCCGCGACGTCGCGGCCACCGCGATAAACGCAATCGCGG CCGCGAAAGCCATAGCGGCGATGGACACTGAAGCGGAATTAGCGGATTACCTGGAAACCTAAACGTTTTTTTTGGCTGAT TGGAGCATCGAATAAGGAAATTGCTTGATTGGTGCATTGAATTAGGAAATTGGTTAATTATATTGGAGCATTGAATTAGG AAATTGCTTAATTGGAGTATTGAATTAGGAAATTGTTGATTGGGGCATTGAATTAGGAAACCTGAACAGGAAATTGCTGA TTGGGGCATTGAATTAGGAAACCTGAACGTTTTTTTTTTGCCTTTATTAAGATCTATTCACTTCATTCTCCTTACGCTCT TCTTCTTCATTCTCACTGTTTTGAGTTTACAGTGACTGGTTTTGTGTTTTTATTTTCACTGTTTTGAGTTTACAATGTCT GGTTATTTGGAACTGTCTTGGATATTTTAATATTTTTGATTTATGAATGGTTATTTCATGCATTTTCATTACATGTCTTG TTTTTATTTTTATGCAGGAGTTTTTTTTTGAAATAATAGCTTGTGACAAGCTATTTTTTATATAAAATTTTACTTATTTT AACCGCTATGCGGTTTCCGCTATTTGCCCGCTACGCTATCCGTTATATGTCATAGCGGATTTTGGGCTCATCGCGATTTG CCGCGATCTGCGATTAATTACACTGGCATCTTTTTACACTTCCTTATTTCCTATTCTGTAGGAATTGGAGCAATATGGCC TGTGCTTCTTGGTGGACAAGCTCATTGGACAGTTGGTCTTGTGGCAACTTTGGTTACCATAAGCAGCATAATTTCAGCTG ATACATTTGCATTTCTTGGTGGCAAGGTATGCAGTTCTATTGTTTTGCTACGTATTAGTTTTATTCTCAGATATGAAGTG ATATTACACTTGGTAGCTTATATCACGCTGTCATTTCTTAGTTTGCTTGATTCTGAAGATTGCAACTATGAAGTTTAATA TATGATATCAGTAATGTTCAAAGTTTCTTTTGATGTTTAATATGAAAAGTTTCTTTTTTACGAAAATGCTGATCATAGTC TCTCATATGGAGCGAAATCAACCAATACAATGTCAATGGAACTATTTCTTGATTGTATTATGTCGGAAAACAAAGTAATT AATGTCAATGGAATTCGCTGGAAAAATATTGGCCATTATTATTACTAGCATATTTGGTCATTTAAGTCAGCATCCTGCAT TTATGTACAACTATAACTTTGTAATTCTGTAGTTATATCCTTAATTAGTATACCACAGCAGTTAAGGCACCTGATCCTGC ATTATTGCAGAGCTGTAATTATGTAATTATAATAGCCAGCTGTAGGATAGCATTTTAGGCAGTTTAACTACTTTTTAGGG TTTGTATCGAGAATTCTCAAGGAAGAGAGAACAAAATTCAAACAAGAGCCCCCTCACACAAAAGCCTTTTGGGCTTGATG AGTGGATAATGCACAGGCACACCTACCATGTGCTGAAATTCCAGATTTTATTAAAATAATGGGGGCGGCAAGGATCGAAT TCTGGACCGCTTGGTCATAGAGGCTGATACCATGTCAAGAACTGAGAAATATATGTTTGAATTGTGTTCTCTCTTGCTGG AGAAATCTCATATTAATAGTATAAAACAATCCATAAAAAGTAGCTAAACTGCTTGAAATGCTATCCTACAATTGACTATT ATAATTACATAATTACAGCTCTGCAATAATGCAAGATCTGGTGCCTTAACTGTTGTACTATACTAATTAATGATATAACT AGAGAATTACGAAGTTACAGCTGTACATAAATGCATGCGGACTTAAATGACCAAATATGACTGTAATAATAATGGCCAAT AAATTTCCAGCTAATTCCATTGACAATTAATGCTATAGATATTATGCCAAAGTTTGTTTACTATATTGTTTAACAAGCTA AATCAGAGAGGGAATACTTTTAACAGAAACTAGAATGAGACCCAAAAAACTATATATATTTTTCCTTTAGAAAAATTCAG TAGGGGCTGTTGGAACTTTTTAAGTCAAAAAAGTCAGCATGTTACTTGTTCTTGTGAAGTTGCTGTGATATGAATGATTG ATTTTCCTTATTTCACATTCAGACGGCCTGTTTTCTTGCTATTTCTAAAAATATGTATTTAACTTATCATTAGTTATGAA ATTATTTTATGAACCTTCATGCAGGCATTTGGTAGAACACCACTTACTAGCATAAGTCCAAAGAAGACATGGGAGGGTAC CATTATCGGCTTTTGTGGGTGTATAGCTACTTCTGTTGTACTGTCAAGAGTTTTCAGCTGGCCATTATCTTTACCAAGGT ACACTACCTGTCCTGAAATGAATGTTAGTGTGTTACTCATTTCAATTGTGATGTGGCTATTGCAATCATTTGCTTGAAAA AATTTGTAGCCTGAAATTTTTTTAGTATTTATATTTAAATATATTAATTTGGTGAGATTAGGTAACTCTGCCTATGTTGT GTCATAGTGGGTCTGAGCCTGAATGGAGGTAGTCTTGATTAGATTAGTACTGGAAATCACATGGTCACTTCATGAGAAAT TTTTTCCCAACAGAGAATATGGAGTTTAGTTTCTAGACATGGTGGCAATCAGTAGTAGTACCATGAATCCATGATGTGGA TTCGTGGCATTAGTATTGTCCGTCATATTGTTATTGTTAATCACCCTGCTTTCTCAAGAATCAGATATGTTCCTTTAGCA ACCTGGTTAATATAGTGTATATGCCTATTATGTATTTATGTTTAAGTTGCATATCTTTTTTGTCATTACAGGGTTACTTG TTTTGTGCTAATCAGTAAATAGACTTCACTCTAGTTTCCCAATGAACATCCATACACTTGCCCTGCAGACTTTTTTGTCC TGTGCACAGTTATCGATACTTGTTTTGATTTGTTGTTTTTACACTGGTCTTGTCAGCGCAATAGCTCTCGGTGTTCTGAG TTTCTTTGGGTCTGTTTTCGGTGATCTCACTGAATCAATGATTAAACGTGACGCTGGAGTGAAGGATTCTGGTTCCCTAA TACCTGGTCATGGTAATTACTCTACTTATGAATATTTCTTTAAGAGATGCTTTATTAATTTATCTTCTGGTATAGAAGAT ATTTGACTGGAGAATGAAGAAATAGCAATATATAAATCATCATGCATCCATGCTATTTTGTTCATCTCTTAATTGTTAAT AAGTAGTTCACAGATCATATGGTTGAAGATTTAATTTAAGGATGTCATCTTGCTGCTAAGGATGAACAGCTCATATTCAA ATTGTTCCTCATTTCGTTCTCCACTCTCGCATTTGAAGGGTTACACATTTTATTGACTCCATTTAATGCAGGTGGAATAC TAGACAGAGCAGACAGTTATGTTTTCACGGGTGCGCTTGCACACTCCTTTGTCAAAACCTTTCTACCTCTCTATGGAGTA TGACATGGAATAAAGGTTAGTGTTGATCAGTGTATCTTCGAGTTAGAGTTTAAATTGCATCTGTTTATACTAGTTTAATA CAATATATCATCTGTAAAGTGTAAATAAAAAATATCAGAACTTTTATTAGAGCACATAAGGTATTCCTTTAGCAGTAAAT TTTTAAGTTTGGCCTTATCTTTATGTCATGTTATGATTGACAGAGAATCGAATTTGAATACTTTGGAAACTCTTGATATT ACTCATGGGATCAGATACAGAAGACAATATGGCTTAAGTAAATATGGAAAAGCTTGTTGAGTGGAAAAGATAGATTTTTC TGATGATCATCACAAAAGGAGCAGCAAAAACTTATGATTTCAAGCCAAGTTAACAATAGTTTACACCTGCTGCAAATTCA AATTCACATGAGGTCACCGATAGGAGGATTGGTTATGTTGTGTGACTTGTAAATAGCCACAATTGGATTTGAAAGAAAAA GATACTTGTAGTTGCTCTAACTGTTTTTTATGTCTCGCCAACCAATGTCCCAAGGCTAGGCAATAGATAAGAATAATTTG GTGCTAGTAAATTTTTTGTTATTTAATAATTGTTAGTAGCCTCGTTGTATTTTAGTGAACACCAAATATCATTCACATAA TATTTGTCTTTATAAGTGTTAAATATAAAGAGGCTTAATAACTCTTTTGGTCAATCACTTATCACAATTTGATAGTTCCG ATTATTCTTAGAATTTATTAGACTAGAGCGTCCCTCATGTGTACTAACTATTGTAATTTTGGTTTTCCATTAACTTCCAT CCAATATTTAACGGTTTTTTAATAAAAAAATTAAAAAGAAAAAAATAAATTTGTCAAATGAAGATGCAAGTTTTTTTTTG GAATGGGAAGAAGAAGGATGAAAACCCAGATGCTAGGTTTCTTCCCTTTCTCTCTTGATCTATTCCCTTTCTTCCAAGTC GCGTCAGGCGCAACTGCTTCATCGTGAAGCTGTCGTTGCCGGTCCTTCCTCTTGTCTCAAATCGTAACCAGATCAAGCCT GGAACCTAGATCGCAACATCTACCTCCATCGAGCCTTAATTCACACAGAAGGGGTCGATTATGGTCATGGGGTTCGATTT ATGGATTTGGTTTTGGGTTCGATTTTGGGTTCAATTGGGGGTCGATGATGGTGACTAGTGGTGGTGAGAAGGGTG
CDS sequence (LotjaGi6g1v0104700.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGCTCACCCTCAACTCAGTAACTCGCTCTCTCTCCATCCCAATCTCATTCCCCTTTATCGCCCCCTCCACCACCATCA CCCTCCTTCCCCATTCCCTTCACTCTTCACCAAACCCAAACCCCTCCTCCGGTTCACCCGCCGAACCGCCGAACCGGTTC AACCCCGTTTCCTCGTCGCCGCCGTCGGTCAAGCCGAGCCGGAACGCCTTCCTCAACTCAATGCCCAACAGGAGGATTTT CTCTCAAAATCTCCGCAACAAGTTAGTCAATTAAAGAACAGAGTTGTTTTTGGACTTGGCATTGGGATTTCTGTGGGTGG TATCGTTTTGGCTGGAGGATGGGTTTTCGCAGCTGCCTTGTCTGCTGCTGTCTTTGCTGGCGCACGCGAATACTTTGAAT TGGTCCGGAGCAATGGAATTACAGAAGGAATGACACCACCTCCACGCTATGTGTCACGAGTCTGCTCGGTCATTTGTGCC TTAATGCCATTGTTTGTCATGTATCGTGGTCATATTGATGTTTCTGTGACTTCTGCTGCTTTTGTTTTGGCCATGACATT ACTCTTACAAAAAGGAAGTCCCCGTTTTGCACAGCTAAGTAGTGCCATCTTTGGGCTATTTTATTGTGGATATCTTCCCT GCTTTTGGGTTAAGCTTCGATGTGGTTTAGCAGCTCCAGCCATGAACACGAGAATTGGAGCAATATGGCCTGTGCTTCTT GGTGGACAAGCTCATTGGACAGTTGGTCTTGTGGCAACTTTGGTTACCATAAGCAGCATAATTTCAGCTGATACATTTGC ATTTCTTGGTGGCAAGGCATTTGGTAGAACACCACTTACTAGCATAAGTCCAAAGAAGACATGGGAGGGTACCATTATCG GCTTTTGTGGGTGTATAGCTACTTCTGTTGTACTGTCAAGAGTTTTCAGCTGGCCATTATCTTTACCAAGCGCAATAGCT CTCGGTGTTCTGAGTTTCTTTGGGTCTGTTTTCGGTGATCTCACTGAATCAATGATTAAACGTGACGCTGGAGTGAAGGA TTCTGGTTCCCTAATACCTGGTCATGGTGGAATACTAGACAGAGCAGACAGTTATGTTTTCACGGGTGCGCTTGCACACT CCTTTGTCAAAACCTTTCTACCTCTCTATGGAGTATGA
Protein sequence (LotjaGi6g1v0104700.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MAHPQLSNSLSLHPNLIPLYRPLHHHHPPSPFPSLFTKPKPLLRFTRRTAEPVQPRFLVAAVGQAEPERLPQLNAQQEDF LSKSPQQVSQLKNRVVFGLGIGISVGGIVLAGGWVFAAALSAAVFAGAREYFELVRSNGITEGMTPPPRYVSRVCSVICA LMPLFVMYRGHIDVSVTSAAFVLAMTLLLQKGSPRFAQLSSAIFGLFYCGYLPCFWVKLRCGLAAPAMNTRIGAIWPVLL GGQAHWTVGLVATLVTISSIISADTFAFLGGKAFGRTPLTSISPKKTWEGTIIGFCGCIATSVVLSRVFSWPLSLPSAIA LGVLSFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRADSYVFTGALAHSFVKTFLPLYGV
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| Phobius | 1 | 94 | 94 | - | – | |
| PANTHER | 72 | 385 | 314 | 6.2E-186 | – | |
| PANTHER | 72 | 385 | 314 | 6.2E-186 | – | |
| Pfam | 92 | 379 | 288 | 5.4E-63 | – | |
| Phobius | 95 | 128 | 34 | - | – | |
| TMHMM | 95 | 117 | 23 | - | – | |
| Phobius | 129 | 149 | 21 | - | – | |
| Phobius | 150 | 167 | 18 | - | – | |
| Phobius | 168 | 173 | 6 | - | – | |
| Phobius | 174 | 190 | 17 | - | – | |
| Phobius | 191 | 195 | 5 | - | – | |
| TMHMM | 195 | 217 | 23 | - | – | |
| Phobius | 196 | 216 | 21 | - | – | |
| Phobius | 217 | 222 | 6 | - | – | |
| Phobius | 223 | 240 | 18 | - | – | |
| TMHMM | 238 | 260 | 23 | - | – | |
| Phobius | 241 | 245 | 5 | - | – | |
| Phobius | 246 | 269 | 24 | - | – | |
| Phobius | 270 | 289 | 20 | - | – | |
| Phobius | 290 | 309 | 20 | - | – | |
| TMHMM | 309 | 331 | 23 | - | – | |
| Phobius | 310 | 314 | 5 | - | – | |
| Phobius | 315 | 334 | 20 | - | – | |
| Phobius | 335 | 385 | 51 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0104700.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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