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LotjaGi6g1v0112300.2

Overview

Field Value
Gene ID LotjaGi6g1v0112300
Transcript ID LotjaGi6g1v0112300.2
Related isoforms 1
Lotus japonicus genome version Gifu v1.2
Description GDP-mannose transporter; TAIR: AT2G13650.1 golgi nucleotide sugar transporter 1; Swiss-Prot: sp|Q84L09|GONS2_ARATH GDP-mannose transporter GONST2; TrEMBL-Plants: tr|A0A072UXB4|A0A072UXB4_MEDTR GDP-mannose transporter GONST2-like protein; Found in the gene: LotjaGi6g1v0112300
Working Lj name n.a.

Sequence information

Genomic sequence (LjG1.1_chr6:26401486..26409967) extracted from Lotus japonicus Gifu genome v1.2.

ATGTCATCTGATTTCAAGTTAGACATTGCTACTCAGCATGACACGGAAGAACCACTGTTAAGCACCGCCTTAACTTCAAA ACGGTCACAAGATGAAAAGACTAATGTCGTGCACACAATTTTCAATGGAATTCGCGAGCAAGGAAAGTTATCAATGAGCA ACTTTGCAACAAACGCAGAACGTAGATCTTTGAGTGATAGGTCTGAAACAATTCTTCTTTTAAAATCCTGTACTTTTTCA TTGGATTTTCACCTTCTCTTATCTTCTTGTATGAGTCTATTTTCCTTTTTTTGCCTTCATCTCTGTTCTGTTAGTAGGAA ATTGATTCAAATTATACTCATGGGTCGACACTACAAACATGCTTACCTAGTTATTCTTTTTCGTCTTTCAACCATTGTAA ATTTCAATCTTATCATATTCCACATGTGTCAATTTGTTCAAAAATCTATTTCGCTCAATTGTACCATGATATTTCTTTCT GGCTTTTGGTGCTGGAAAGTTCTTGTTTAAATTTTGGAGGTCTGTTCTATTTATTTAAAACAATGGTGGTACATTTCAAG TAATATGTGAAACACTACCTTTATAAGCAGATTTCTTAAAACAAATAAAGCTACAGTTGGGGATGATGCCAGTTTTCATG TAAATGGGGAGGAAAGGCATCGTTTGCACGGATCAGCTAACAAGAAATCTGGACCACTTATCTCTGGAACAGCTTACTGT ATTTCCTCTTGCTGCATGATAATGCTGAACAAAATTGTTTTATCAAGTTATAACTTCAATGCAGGAATATCATTGATGTT TTATCAAGTAAGTTAGTTATTGTCCTTCTTTTTGTGCTGTGATAATTCCAAATGATGGAAACTCTTGATCTGACCATAAC GTTTAAAAATGATATTTTTTCCCTCCTTATTGATCCACTTTCTTTCCTGTAGTTACTATAAATGCTAAATCAAATATTAA TTTGATCTTCATTCTTCCATGTTCTTTGCAGAACTTGATCAGTACTCTGGTGGTGGTTTTATTGGCCCTCTGTGGCAGAG TTTCAGTTGAAAAGCTCAATTGGAGGCTGGTCAGGGCCTGGATCCCTGTAAATGTGATATTTATTGGCATGCTTGTTTCA GGCATGTATAGGTATAGAATAAACTTCTCTTGTTGTTTTTCCGAATTGCTGAATGGTATGAGAACCATCAGCACAATTCT CGCATGAATTATATGTTGCTCATGATTGTTTTTTTATTATATAATCTTCCCTCATTTCATCCACCTTAGTGTATTATATT ACTTGTGTGTGATTGGTTGACACTGCCTGATCAAATTTCATCAATACCACCCTCTTTTTTTTTTGAATCCTATGAAGATG TTGAACCTTATTAGTGAGACAACTTTGTAAGGTTCAGCATTACCATTATTGTGCTACTGCTCAATCTGGTAGTAGATGAT ACATATTGTTCTGCTCCTATCTACTCATAATACCTTCTGATGAATTTGTCCTTTCAGTTTGAAATACATAAACATTGCAA TGGTGACAATTCTCAAGAATGTGACAAATATTTTAACAGCAGTTGGAGAATTATATTTATTTCGGAAACGTCAGAATTCC AAAGTGTGGACTGCTATGTTTCTGATGGTAAACGACATTCTTACATCATACTCATTGATATACTGTTTATTTTGGAAAAC ATCGAGTTTCATTGCAAACAATATATTATATAATTGTTTCCTATACAAATCTAATAAAAATAGGAAACTGGATGAAAAGA GTGTGGCATTTGAGTAGCTGAAAGTCAATGGGAGTTTAAAACAAAGTGTTATGGCAAACTAAATAGGCCTTTAATATTTT ATTTTTTCAATCCTTGGTAATTCAATGTTTGTGAAACCTGTCTTTGGTCTGACATGTATGGGTCTGAATTAATTAGAAAT GAAATTTTTTGCTGTTCCATCAGCTGAGAAAATTAAAATGCTGTTACTTTGATTTATTCATCAAGTTACATGTCCTCTTA TAAAGAAACTTAACAGTGTATTTATTTAGTATTTACTTTCTGATAGTCTTCTTAGCTATTGCACTCTTTGTGAAGCATTA GTATATGAGTTTTTGAAGTTTTGTTCCTCTCTCTTTACACACTTCATACAGATTATCTCTGCTGTCGGTGGCGGGTTTAC AGATCTCTCCTTCGATGCAGTTGGTTATTCCTGGCAAATTGGCAATTGTGTCCTTACTGCAAGTTATTCTGTAAGAATAT TTGCCCTTGTTTTCTTTCTATATTCTACAAGAGGTTTCCCAGTTTGATACTGTGGCTGATAATTTTAAAACGGGAACCTC TGTCCATAACAAGTCCCAGTTACGTCCAATCCGGGCTTTGATGAAATTTTTTCCTTTTTGTGACAGCTTACCCTTAGGTG GGTTATGGACGAAGCAAAAAAGTCAACAAAATCTGGATCCCTTAATGAAGTGTCAATGGTTTTGCTGAACAACTTATTGT CTTTACCTTTTGCCATCATCTTGATCTTCCTTTTCAGAGAGTGGGATTATGTAATACACGCGTGAGTGAATTTGTTTCTT TGCTTTCAAGTTCAATTAAACCTTCTGCACACTAACCAATGATTTTCATCTTGATATCCAGCGACGTAGTTAAACTGCCA ATGTTTTGGGTCTTTGCAACAGCTAGTGGACTTCTTGGACTTTCTATCAGCTTTACCTCAATGTGGTTCTTACATCAAAC AGGCCCTACAACATACAGGTAGTTTTATGGACTTGACATTTGATACATATATAGCGAGCTTGGATCCTCTCTTCGGCTTT ACTCATATGTTTGTGATAGAAAACTCAGTAATGAAACGGCCCTAGATGATAGCAAGGATGTGGGCCTAGATGTGAACAAT CAGAAGCCCAAGGTTTGGAGAGTTTACAAGAGGAAGCGTGGGAAGGTTCTACAAGAGGCTGAGCTGGCAGATATTTGAGG AGGGGTATATTAAGTTTGTTAGGATATAAGAGGGAGAGTAGAATGAGGAATCATTATGATAGATCATTATTCTTTCTGTT ATAGAGAGAGAAGAGAAATAGGCTCACACTAGTGAGAGGGAAGCCGTTAGTGCTTTTGGGGTTGATAATATCCATTGTCA ACACTTTCTTTATTCTCTGTTACCTTGTATTTCCTTTTTCAATCAATACAATTGCAGACTGTTTCTTTCTTTATCTCTAA GTTTACTCTGGTTGATTCATCTAACCCATCAATTGGTCCGACCTGCCGGATCAATACACCGCTGGAACCAGTGAACGTAG ATGCTAACGAGACTCAGAATGGGAGATCGAATTGATGCATTGGAGACACAGATGGGGGACGTGACCACCACGTTGCAAGA ACTTGCAATCCAAATGCAACAACATGCTCAGCAGATGCAACAACAGAGTTTGGTTTTATCTGAACTCAGCAAGCAGATCA GTCAGAAGGGAGTAACCCAGGAAGGTGAGACCTCTGTCGAAGCATCATCGCAGAACGAGTCTCGTCTTGCCGGGAAGAAG GTGAAACTTCCGGTGTTTGAAGGTGAGGACCCTGTGGCATGGATCACGCGCGCTGAGATTTACTTTGATGTGCAAAATAC CCCTGACGAGATGCGAGTGAAGCTGTCTCGATTGAGCATGGAAGGCTCGACAATACACTGGTTCAACTTGTTGTTGGAAA CAGAGGATGATCTTTCGTGGGAGAAATTGAAAAAAGCTCTTATTGCGAGATATGGAGGAAGGAGGTTGGAGAATCCGTTC GAGGAGTTGTCTACACTCCGTCAAACCGGATCCGTGGAGGCATTTGTTGAAGCGTTTGAGCTGCTCTCATCACAAGTGGG ACGTTTGCCAGAGGAGCAGTACCTGGGTTATTTCATGAGTGGTTTGAAGCAGAAAATCCGACGACGGGTAAGAACCTTGA ATCCTCAGAATCGGATGCAACTGATGAAGATGGCCAAAGATGTCGAGGATGAGCTGAAGGATGAGGACGACGACGGAGCC CGATGCTATGGAAAAAATCGCATGGGCCGCACTGAATCAACCGGGTTGCAGCCCAAGCCTTTTACCCGGCCTACCACGAG TTGGAGCAACCCGACCCCGACCCAAAAAACGAGTTTCTCGGGTTCCACTGGGTCAAACTCAATTTCGACGGCGTCGATGA GTTCTACGGGCAGAAAGGTAGAAAACACCAGCCACACATTGTCGTCTGAACGGTGGAAAGGGGTTCGTAGCATCCAGAGC GATGTAATCGCGGATCGTCGAGCAAAGGGGTTATGTTTTAAGTGCGGAGGGAAGTATCATCCCACTCTCCACAAGTGCCC TGAACGCTCGATGCGAGTCTTAATTCTGGGTGACGATGAGGGATTGAACGATGAAGGGGAGATAATAGCTCTCGAGGCCA TTGAAGCTGAGGAAGAAGATGAGGATATTGAGGCTGAGTGCAAGCTGATAGGGGTGTTGGGCAGCATGGGTGAGTGTCAC ACGATGAAGATTTCTGGGACTATTGCTAGCGTCGACGTGATGGTTCTAATTGATAGTGGCGCCAGTCATAATTTCATTTC GCCAGAAGTCACGACAGCTTTAGGATTGCCGGTGACTCGTACAACAAAGAAAATCAAATTAGGCGATGGACACAAGGTTC TTTCTCAGGGAATCTGTGAAGGGGTCAAAATCGATTTGGGACCTCAAATCTTTGCTGTGGATGCTCTGGTGTTGGAGCTG GGAGGATTAGATGTTGTGTTGGGAGTATCTTGGTTGAAAACTCTGGGGAAGGTGGTGTCAGATTGGAAGGAACTTTCAAT GCAATTTTCGTACGAAGGAAAAATGATCAATCTGCAGGGTCAGGGAAGAAACCAAGAGACACAAAGTGGATTGCACTCTT TCTTAGAGGATAATCAAAGAAGAGGAAAGGAAGACTGGTGGTGGACTCAACCTGGAGCTGAGATGATTGCTCAAACAGCA GCAGGTCATCATGAATTGACTAATCTACTAAGTCAATTCTCTAAGGTGTTTCAAGAGAAGATCACCTTGCCTCCTGAAAG AAGTCAAGTGCACCAGATCAAGTTATTTCCTGAGCATGGTCCTGTAAATGTAAGGCCATACAGATACCCTCACCATCAAA AAGAAGAGATAGAAAAACAAGTGGCAGAGTTGTTAGTCGCAGGAATAATCAGGCCCAGCATGAGTGCATTCTCTAGTCAT GTCATCTTAGTCAAAAAGAAAGATGGCTCTTGGAGAATGTGTGTGGACTATAGGGCATTGAACAAAGCTACAATCCCAGA TAAGTACCCCATTCCTATTGTAGATGAATTGTTGGATGAATTGCATGGAGCAACTGTCTTTTCTAAACTAGATTTGAAGG CGGGATACCATCAAATTCGTGTTCACGAAGATGATATTCAGAAAACCGCTTTTAGAACTCATAATGGACACTATGAGTAT CTTGTAATGCCTTTCGGATTGATGAATGCACCAGCCACTTTTCAGGCCACAATGAATGATATTTTCAGACCTTTTCTCAG AAGTTTTGTGTTGGTATTCTTCGACGATATCCTAGTTTACAGCAGGTCTGAAACAGAGCACTTGGGGCATTTGAAGACAG TTTTGTCAGTCCTGGAGAACCATTGCTTTGTGGCCAACGAGACCAAATGTAAGTTTGGCTGCAGTCAGATAGATTACCTT GGCCACGTCATATCTGGAGATGGTGTGGCAGTAGATCCAGACAAAATTCGTTGTGTCTTGGAGTGGCCTGAACCTAAAAA TGTTAAAGGAGTTCGTGGCTTCTTGGGGCTTACAGGGTATTACAGAAAATTTGTTAAAGATTATGGCAAGATTGCCAAGC CTCTAACTGAATTGACTAAGAAGAACAACTTTGTTTGGGGAAAAGAAGCCTTAGATGCCTTCAACTTACTCAAGCAGATT ATGACTACACCTCCAGTGCTCGTGTTACCTAATTTTTCTGTGGTTTTTGAGGTGGAATGTGATGCTGCAGGGAGAGGGAT TGGGGCTGTCCTGATGCAGAAGAGGCAACCAATAGCTTACTTCAGCAAGGCTTTATCTGAGGGAAATTTGGCCAAATCTG TGTATGAGAAGGAGCTTATGGCTTTGGTGCTTGCCATTCAACATTGGAGACATTACCTCTTAGGCAAACCTTTTGTGGTC TATACTGATCATAAGAGCTTGAAACATTTTTTGCAGCAACGGGTGACTTCTCCTGATCAACAGTGTTGGTTGGCTAAGCT TCTGGGGTATCAATTTGAGGTGAAGTATAAGCCAGGTCTAGAGAATAAGGCAGCTGATGCCTTGTCAAGGTGCCATGGAG ATGTGGAGTTGACTGCTTTACTATCTTATCCTACATGGTTGGATGGAGAGAAGTTGCTACAGGAAGTCAGACAAGATCCT ATGTTGCAAGAAACAGTGGAGGCAGTCAAAATGAATCCTGGAATTAAGCCAGGGTTCACTATCCAGCAAGACATTCTATT CTACCAAGGACGCTTGGTGTTGTCCCCTACTTCTCCTTCCATTCCCTTACTACTGCAAGAATTTCATGCAACACCTACGG GAGGGCACTCGGGGTTTCTTAGAACCTACAAAAGGTTGGCAGCTAACCTATATTGGCCGGGAATGCAGAAAAGGGTCAGA GACTTTATCAGGTCTTGTGACATTTGCCAAAGACAGAAATATGCAGCAACATCTCCCGGAGGTCTTCTTCAACCTTTGCC TATTCCAAATGCTATTTGGGAAGACCTTTCACTAGATTTTATCACTGGATTACCTAAATCCAAGGGATTTGAGGCTGTGC TGGTGGTAGTGGACAGACTATCCAAATATAGCCATTTCTTACTGTTGAAGCATCCTTACACTGCAAAATCGGTGGCAGAG CTATTTGTGAGGGAGATAGTCAGGTTACATGGTGTTCCTTTGACAATCATTAGTGATAGGGACCCTTTATTTGTAAGCCA TTTCTTGATGGAACTTTTCAAACTGCAGGGTACTCAGTTGAAGATGAGTTCAGCCTACCATCCAGAGACTGATGGGCAAA CCGAAGTCACAAACAGATGCTTAGAGAGTTACTTGCGTTGCTTTGCTTCTGAACAACCTAAGACATGGTCTCATTGGATA CCATGGGCTGAATTTTGGTATAATACCACCTTTCATGTGTCCATTGGCAAGACTCCTTTTGAGGTGGTCTATGGTAGGCA ACCACCAAGTATCATTCGTTTTCTGAGCAATGAGACAAAAGTTGCTGCTGTGGCTATGGAGTTGAGTGATAGAGATGAGG CGCTGAATCAGCTGAAATCTCATTTGTTGAGGGCACAACAGCAAATGAAAAAGTATGCAGACAAAAAGAGAAGGGAGGTT CACTTTGAGGTTGGGGAATGGGTCTTTCTCAAGCTAAGACCTCACAGGCAGCATTCAGTAGCAAGGAGAATTAATCCTAA GTTGGCTGCAAGGTTTTATGGACCTTTTAAGATCATAGCACAAGTGGGAGAGGTTGCTTACAAGCTTCAGTTACCTGTTC AGTCCAGGATACATCCTGTATTTTTCATGTATCCTTGTTGAAGAAAGCTATTGGAGATTACTCTGTGCAAGGAGAACTTC CTAAGGAGCTGGAGCTCAATCCTGTGGATGACATTTATCCAGAGCAGGTTGTGGGCTCAAGGATTATCACTCAGGGAGGG GTCTCAGTGTCCCAAAGTCTTATCCAGTGGAAGAACAAATCTGCTGATGATGTTACTTGGGAAGATGATGCTTTCATTCA AGGACAATTTCCAGACTTTAGCCTTGAGGACAAGGCTGTAACTAAGGAGGGTGGAATTGATAGAAAACTCAGTAATGAAA CGGCCCTAGATGATAGCAAGGATGTGGGCCTAGATGTGAACAATCAGAAGCCCAAGGTTTGGAGAGTTTACAAGAGGAAG CGTGGGAAGGTTCTACAAGAGGCTGAGCTGGCAGATATTTGAGGAGGGGTATATTAAGTTTGTTAGGATATAAGAGGGAG AGTAGAATGAGGAATCATTATGATAGATCATTATTCTTTCTGTTATAGAGAGAGAAGACAAATAGGCTCACACTAGTGAG AGGGAAGCCGTTAGTGCTTTTGGGGTTGATAATATCCATTGTCAACACTTTCTTTATTCTCTGTTACCTTGTATTTCCTT TTTCAATCAATACAATTGCAGACTGTTTCTTTCTTTATCTCTAAGTTTACTCTGGTTGATTCATCTAACCCATCAGTTTG TATCTGTTTTTACAGTCTTGTAGGTTCATTAAACAAGATTCCAATCTCTGTTGCTGGCATTCTAGTGTTCAATGTGCCTG TCAGCGTATCCAATTTGTTCAGCATTTTGTTTGGTAATTATTCAAAACCACTCCACACTTCATTTTTTTTTCTTCTATAA AAAAATCTTCTCTTGATAATTCCCACTATTTTCAGGTCTCTTTGCTGGTATATTCTTTGCAAGAGCCAAAATGTCCTCTT GA 

CDS sequence (LotjaGi6g1v0112300.2) extracted from Lotus japonicus Gifu v1.2 CDS.

ATGTCATCTGATTTCAAGTTAGACATTGCTACTCAGCATGACACGGAAGAACCACTGTTAAGCACCGCCTTAACTTCAAA ACGGTCACAAGATGAAAAGACTAATGTCGTGCACACAATTTTCAATGGAATTCGCGAGCAAGGAAAGTTATCAATGAGCA ACTTTGCAACAAACGCAGAACGTAGATCTTTGAGTGATAGATTTCTTAAAACAAATAAAGCTACAGTTGGGGATGATGCC AGTTTTCATGTAAATGGGGAGGAAAGGCATCGTTTGCACGGATCAGCTAACAAGAAATCTGGACCACTTATCTCTGGAAC AGCTTACTGTATTTCCTCTTGCTGCATGATAATGCTGAACAAAATTGTTTTATCAAGTTATAACTTCAATGCAGGAATAT CATTGATGTTTTATCAAAACTTGATCAGTACTCTGGTGGTGGTTTTATTGGCCCTCTGTGGCAGAGTTTCAGTTGAAAAG CTCAATTGGAGGCTGGTCAGGGCCTGGATCCCTGTAAATGTGATATTTATTGGCATGCTTGTTTCAGGCATGTATAGTTT GAAATACATAAACATTGCAATGGTGACAATTCTCAAGAATGTGACAAATATTTTAACAGCAGTTGGAGAATTATATTTAT TTCGGAAACGTCAGAATTCCAAAGTGTGGACTGCTATGTTTCTGATGATTATCTCTGCTGTCGGTGGCGGGTTTACAGAT CTCTCCTTCGATGCAGTTGGTTATTCCTGGCAAATTGGCAATTGTGTCCTTACTGCAAGTTATTCTCTTACCCTTAGGTG GGTTATGGACGAAGCAAAAAAGTCAACAAAATCTGGATCCCTTAATGAAGTGTCAATGGTTTTGCTGAACAACTTATTGT CTTTACCTTTTGCCATCATCTTGATCTTCCTTTTCAGAGAGTGGGATTATGTAATACACGCCGACGTAGTTAAACTGCCA ATGTTTTGGGTCTTTGCAACAGCTAGTGGACTTCTTGGACTTTCTATCAGCTTTACCTCAATGTGGTTCTTACATCAAAC AGGCCCTACAACATACAGTCTTGTAGGTTCATTAAACAAGATTCCAATCTCTGTTGCTGGCATTCTAGTGTTCAATGTGC CTGTCAGCGTATCCAATTTGTTCAGCATTTTGTTTGGTCTCTTTGCTGGTATATTCTTTGCAAGAGCCAAAATGTCCTCT TGA 

Protein sequence (LotjaGi6g1v0112300.2) extracted from Lotus japonicus Gifu v1.2 Proteins.

MSSDFKLDIATQHDTEEPLLSTALTSKRSQDEKTNVVHTIFNGIREQGKLSMSNFATNAERRSLSDRFLKTNKATVGDDA SFHVNGEERHRLHGSANKKSGPLISGTAYCISSCCMIMLNKIVLSSYNFNAGISLMFYQNLISTLVVVLLALCGRVSVEK LNWRLVRAWIPVNVIFIGMLVSGMYSLKYINIAMVTILKNVTNILTAVGELYLFRKRQNSKVWTAMFLMIISAVGGGFTD LSFDAVGYSWQIGNCVLTASYSLTLRWVMDEAKKSTKSGSLNEVSMVLLNNLLSLPFAIILIFLFREWDYVIHADVVKLP MFWVFATASGLLGLSISFTSMWFLHQTGPTTYSLVGSLNKIPISVAGILVFNVPVSVSNLFSILFGLFAGIFFARAKMSS 

Domain prediction

Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.

Merging data from EBeye. Please wait…

Domains

Sorting

Prediction algorithm Identifier Start End Length E-value InterPro ID
Phobius 1 100 100 -
PANTHER 20 398 379 1.7E-186
PANTHER 20 398 379 1.7E-186
Phobius 101 119 19 -
Pfam 109 387 279 9.0E-13
Phobius 120 130 11 -
Phobius 131 153 23 -
TMHMM 136 158 23 -
Phobius 154 164 11 -
Phobius 165 186 22 -
TMHMM 165 187 23 -
Phobius 187 191 5 -
Phobius 192 213 22 -
TMHMM 192 214 23 -
Phobius 214 224 11 -
TMHMM 221 243 23 -
Phobius 225 243 19 -
Phobius 244 248 5 -
Phobius 249 269 21 -
Phobius 270 280 11 -
Phobius 281 305 25 -
TMHMM 286 308 23 -
Phobius 306 320 15 -
TMHMM 321 343 23 -
Phobius 321 344 24 -
Phobius 345 350 6 -
Phobius 351 371 21 -
TMHMM 363 394 32 -
Phobius 372 376 5 -
Phobius 377 394 18 -
Phobius 395 400 6 -

Gene function (GO predictions)

GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .

Unable to find any GO terms for the transcript with the identifier.

Expression data

Expression pattern

Expression pattern of LotjaGi6g1v0112300.2, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.

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