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| Field | Value |
|---|---|
| Gene ID | LotjaGi6g1v0132100 |
| Transcript ID | LotjaGi6g1v0132100.1 |
| Related isoforms 1 | |
| Lotus japonicus genome version | Gifu v1.2 |
| Description | Chaperone protein dnaJ; TAIR: AT5G53150.2 DnaJ heat shock amino-terminal domain protein; Swiss-Prot: sp|A5W9N6|CBPA_PSEP1 Curved DNA-binding protein; TrEMBL-Plants: tr|K7LXY7|K7LXY7_SOYBN Uncharacterized protein; Found in the gene: LotjaGi6g1v0132100 |
| Working Lj name | n.a. |
Genomic sequence (LjG1.1_chr6:38017501..38021348) extracted from Lotus japonicus Gifu genome v1.2.
CAAAAGGCCATTCTCATAACTCATAAGTAATTTGGGAGCAATAGAGAGGTCATTGTACATGGTGATTGTGTCTTTTCATA TTCAAATTCCAAACACTCAAAGAGTCACAGGTACTCTCAAATGCTTGTATTTCACTTCCTTCATCACTTCCCCATTGTTA TCACCTTCAAAAATGCTTCATTTTTGCTTTTGAATTGCTTGTTAGATTGGGGGTTGCAACGAAATTTGGGGTTTGAACTG CAGAAATTCTTCATTTTGAATTTCGACCGTTGTGTGTTTTTTTGAAAATGCATGTGATATCCCTGTAGTGTAGATCCTAG TTTTTCAACGTGTTTCTTCGTTAGGGTGAGACATGAGTTTGTCTGAATTCTTTGCTGTACCTGTCTTTGTTCTGTTTGTG TGGGTCAAGAATTGTGTTTATCAGATGATTTGTGATTGCTATCAACAATTAAATTCTAGGGTTTTGTCTATTTATTGATA TTTCACTTCTTTTTTTCTCTGGTATTGATAGGACTTAGTGTTGTTGGTTGTTACTTTAGACTTTGATATTGTCTCCAACG GAACCGAAAAAATAAGGGTTTGCTGTATTGAGCTGAGTTTTCAAATGGGTTGAAAATATTTTTAAAATGGTTCTAGTAAG TATAATCTTTTGTATATTCATGACATTTTGTGGTTCAGTTCTGTTTTCCCCTTTTATGGTGTGTTTGGTTCATTGGAAGG AAGGGGGTGGGAGAGATTTTGATGGAGGGGAGGGGAAGAGAGGGCATGATAGGAGAGATTTTTATTGTTATCATGTTTGG TTAAGATGAGTGGAGTGCGGGGAAATAACTCAGTTCTTGTTTGGTTTATGAGGGGAGAGGAGGGATTTTGAAACAAATTT ACTTTAGATGTCCTTAGTTTTAAAAGAGTCAGTGAGCTCTCAGCCTTAGTGAGCTCAGAGGGAATAGAATTGTAGACATT TGTTATTCGATATGTGAGTATGAATAGAATCCATAAAAGTATTTCATGGTAATCTATGAATAGGATTTTGTTGAATATTT GGTTTACTAGTTGCTGCATTATGGAAAATCGAATTTAACCGATGGCAATACTTGAAAATGCTGCCAACAGTTGTCATAGT TTCTGTCTTCTTTTCTAGTGTGGAAAGAAAGAGCTGCTTAATATATGGTATGTTTTTTAAAAACAAGAACTCTTGTAAAC AAGAATCAATATTTATAAATTCTGAGATTTGACATTTACTAGTTTCATGTTTTGTAAATATGTTAGAGTTTTGATGTTAG ATATATAATAAGTTTATGCTTCAATCATATAAATATTGGTCATATCTTTTTTGCCCCTTTTTTGGAAACATCTGTTCTTA TTTGTGTCTAACGTCTCTGAATGTATGGGTTCATTAAATTTTTGAAAATTTTCCCCTTCTCTTTATTTTTTGACTGCCGG TAGGGATTGACTTGTCCAGATATTTAGAGAAAGAAAATGTAGAACTTACTGTCCATTTACTTCCCAGACGCTTAATCTAG TTTGTCTTCACATCATTATGATTCCATGATTTTTAATTAAATTTGATTGCTTGTAGTGTTGTCAAATGTCCGCCATGGCC GATTCTCATGGGAGAATTCTAGCAAGTCGCCATGGCCGATATTCTGTCATAATCTGCCATCCAGCATCTGCCTTTGTCAA ATATGTTCTGTTTTTGGCTTTCTGCCATAGTGTCATTCTCCATTAACAATACTCTTGCTTGTATAAGAAATACCCTTGCT GACTAAATTTTTTGAGTGAGAAGTTGAGTAGGGCCTCGTTTGTTAAAATAATCTTGTGAAGTATGCTGTATGAACTTTAT GTTTCTGGTGTTTGGAAAGCCTTTAGCATTGACAAGGAATCTTTTATGACAGAAAACATGACTGTAGTTCATGTTGGATA CTTGAATTGCTGTTGAATACTTGAATTGCTTGCACCATTGATTTATCCATTACTAGTTTGCTATATTTGTGACAGAGAAC TCTGAAATGCTGGCTTACTTATAATTGTTTATTCGCTACCTAAAGAATTTTAGGGGCATCTCTCAATGTTTTTTTGTTCT TCTTTGGGTCTGTGGCATGATTGAAGGTTCATTAATTCAAAGTGTTCATGTTTATAGAATCAAGCTCTAATTGTTAAATT CTTTCATGTCTTTTAGCTAGGTGACAGAGCAACATATTGAGAGTTGAGACAACGGGGAATATATGGATTGCAACAAAGAT GAGGCAGCTAGGGCCAAGGAAATAGCTGAGAAGAAATTTTCTCTAAGGGAATATGCTGGTGCAAAAAAGTTGGCTCTCAA GGCTCGGAATTTGTATCCTGCACTGGAGGGTCTTCCCCAGTTTCTGTCAATTCTGAATGTTTATATCTCTGCTGAGAATA AAATAAATGGACAAATGGATTGGTATGGTATACTTGGGGTGGATCCCTTTGCTGATGAGAAGACAATTAGAAAGCAATAC AGGGTATTGGCTCTCAGTCTTCACCCTGACAAAAATAGGTCTTTAGGTGCAGAGGGTGCATTTAAGCTTGTTTCAGAGGC ATGGAGCTTACTATCTGATAAGGCCAAGAGACTAGCATACAACAACATCAGGGGTTTGGGTGGACTTCAGCATAATGCTC GCAACCATGTTGGGGCTCAATCCAAAGCACCCAGTTCAAGTGGTTCTAATAATCCTAAGAAGAATGCAACCTCAGATGGG AGAACTGGAAATAATAATGCCCGGGCACCACCTTCACCCTCCATTCCTCGTCCACATAAAATGCCGGGTACCTTTTGGAC TGTGTGTAGGTGCAAGGTACATTTTGAGCATCTCAGGGTTTATTTGAATCAAACTATCCTATGTCCCAATTGTAAGGAAG CTTTTAAGGCTATAGAGAAGAGTCCGCCTCCTAATGCTGTTAAGTCATCTTATTCGGCTTCTCGGCAACATGATCAGAAG TCTCAACATCATGCTGGAAAGAATCACCCCATCAATCCGGGAAGAGCTTCTGCAGTTTCTCAAGACAAGAAATCCAGCAG TTCTGCAGGCATTTCTTCTTTTAACAATATAAGCTTCCAGCGTGGTCCTCCCTCAAGAATGCCTGGTTTTGTTGGTCCAG ATGGATCGTCGTCTGTTACTGCTGCAAGTTTTAAGCAGCATTCAGGCGAGAAAAGAAAATTTGAAGGAGCTGCATCAATT ACTTCGCGGGAGAAGAATAACCCCATCAATCTGGGAAGAACTTCTGCCGTTTCTCAAGACAAGAAATCCAGCAGTTCTGC AGGCATGCCTTCTGCAGTGTCAATTCGTGCTTAAAACATAGATTTTCCGTCCTTGTTAATAGTCTGCTAGAAGGGGAAAA TTAAGGTCATATGACTGTAAAAATCCCTTTCCTCTAGCTATTTGCAGAACTTGCAATCCTTGAACTTTTCCATTCTTGGG TCTTCATGTTTCCGGGAGAGTAGTGATGGTTGAGTTGGGTATGTGGTTGCTGGGCCAGTGTGGCTGTTAGGGGAGTAAGG ACTGGGGATCTTTATCAGTTGGTCTTTGGTTGTTTAATGGTTTCAATTGCTTTCTAAGACTTCTAATGATTGGTTATTGA AATGGGTGGAACTATATAAAATTCTTTAGAGAGTGAGAATTGTGTGTCATAAAAAAGTAGAAAATCCTGAACTGGGCTCA GTATTAAAAGAGAAAGAAACCCAAAGATGAATAAAACCATTGGAAAAGTAATGGTAATGAGTTAATGATGATAATGTGCA AGAAAAGTGCTGCTATATTATCAGAGCAGCAAAAGGGGACAAGTCCTCTGATTCCATTGCTGGAAATCAATGAATAAATC AATGGCAG
CDS sequence (LotjaGi6g1v0132100.1) extracted from Lotus japonicus Gifu v1.2 CDS.
ATGGATTGCAACAAAGATGAGGCAGCTAGGGCCAAGGAAATAGCTGAGAAGAAATTTTCTCTAAGGGAATATGCTGGTGC AAAAAAGTTGGCTCTCAAGGCTCGGAATTTGTATCCTGCACTGGAGGGTCTTCCCCAGTTTCTGTCAATTCTGAATGTTT ATATCTCTGCTGAGAATAAAATAAATGGACAAATGGATTGGTATGGTATACTTGGGGTGGATCCCTTTGCTGATGAGAAG ACAATTAGAAAGCAATACAGGGTATTGGCTCTCAGTCTTCACCCTGACAAAAATAGGTCTTTAGGTGCAGAGGGTGCATT TAAGCTTGTTTCAGAGGCATGGAGCTTACTATCTGATAAGGCCAAGAGACTAGCATACAACAACATCAGGGGTTTGGGTG GACTTCAGCATAATGCTCGCAACCATGTTGGGGCTCAATCCAAAGCACCCAGTTCAAGTGGTTCTAATAATCCTAAGAAG AATGCAACCTCAGATGGGAGAACTGGAAATAATAATGCCCGGGCACCACCTTCACCCTCCATTCCTCGTCCACATAAAAT GCCGGGTACCTTTTGGACTGTGTGTAGGTGCAAGGTACATTTTGAGCATCTCAGGGTTTATTTGAATCAAACTATCCTAT GTCCCAATTGTAAGGAAGCTTTTAAGGCTATAGAGAAGAGTCCGCCTCCTAATGCTGTTAAGTCATCTTATTCGGCTTCT CGGCAACATGATCAGAAGTCTCAACATCATGCTGGAAAGAATCACCCCATCAATCCGGGAAGAGCTTCTGCAGTTTCTCA AGACAAGAAATCCAGCAGTTCTGCAGGCATTTCTTCTTTTAACAATATAAGCTTCCAGCGTGGTCCTCCCTCAAGAATGC CTGGTTTTGTTGGTCCAGATGGATCGTCGTCTGTTACTGCTGCAAGTTTTAAGCAGCATTCAGGCGAGAAAAGAAAATTT GAAGGAGCTGCATCAATTACTTCGCGGGAGAAGAATAACCCCATCAATCTGGGAAGAACTTCTGCCGTTTCTCAAGACAA GAAATCCAGCAGTTCTGCAGGCATGCCTTCTGCAGTGTCAATTCGTGCTTAA
Protein sequence (LotjaGi6g1v0132100.1) extracted from Lotus japonicus Gifu v1.2 Proteins.
MDCNKDEAARAKEIAEKKFSLREYAGAKKLALKARNLYPALEGLPQFLSILNVYISAENKINGQMDWYGILGVDPFADEK TIRKQYRVLALSLHPDKNRSLGAEGAFKLVSEAWSLLSDKAKRLAYNNIRGLGGLQHNARNHVGAQSKAPSSSGSNNPKK NATSDGRTGNNNARAPPSPSIPRPHKMPGTFWTVCRCKVHFEHLRVYLNQTILCPNCKEAFKAIEKSPPPNAVKSSYSAS RQHDQKSQHHAGKNHPINPGRASAVSQDKKSSSSAGISSFNNISFQRGPPSRMPGFVGPDGSSSVTAASFKQHSGEKRKF EGAASITSREKNNPINLGRTSAVSQDKKSSSSAGMPSAVSIRA
Data for domain prediction are obtained with InterProScan, and merged with InterPro data obtained from the EB-eye REST service.
| Prediction algorithm | Identifier | Start | End | Length | E-value | InterPro ID |
|---|---|---|---|---|---|---|
| PANTHER | 1 | 274 | 274 | 4.9E-109 | – | |
| PANTHER | 1 | 274 | 274 | 4.9E-109 | – | |
| Gene3D | 54 | 151 | 98 | 1.7E-20 | ||
| SUPERFAMILY | 56 | 129 | 74 | 1.57E-20 | ||
| SMART | 65 | 122 | 58 | 2.2E-21 | ||
| Pfam | 66 | 127 | 62 | 4.1E-19 | ||
| ProSiteProfiles | 66 | 130 | 65 | 16.599 | ||
| CDD | 66 | 119 | 54 | 1.92402E-19 | ||
| PRINTS | 68 | 86 | 19 | 6.2E-12 | ||
| PRINTS | 86 | 101 | 16 | 6.2E-12 | ||
| PRINTS | 102 | 122 | 21 | 6.2E-12 | ||
| ProSitePatterns | 107 | 126 | 20 | - | ||
| MobiDBLite | 137 | 186 | 50 | - | – | |
| MobiDBLite | 140 | 176 | 37 | - | – | |
| MobiDBLite | 226 | 363 | 138 | - | – | |
| MobiDBLite | 260 | 288 | 29 | - | – | |
| MobiDBLite | 326 | 357 | 32 | - | – |
GO predictions are based solely on the InterPro-to-GO mappings published by EMBL-EBI, which are in turn based on the mapping of predicted domains to the InterPro dataset. The InterPro-to-GO mapping was last updated on , while the GO metadata was last updated on .
Expression pattern of LotjaGi6g1v0132100.1, powered by ExpAt. For advanced configuration, data transformation and export options, view expression data in the ExpAt application.
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